Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2IPF9X Arachis hypogaea HOM05D000319 ORTHO05D083034 6.8e-40 166.8 79 100.0
arahy.Tifrunner.gnm1.ann1.N9FE2L Arachis hypogaea HOM05D000319 ORTHO05D012541 8.7e-27 123.2 85 71.8
arahy.Tifrunner.gnm1.ann1.0GN70T Arachis hypogaea HOM05D000319 ORTHO05D003924 7.3e-18 93.6 45 97.8
arahy.Tifrunner.gnm1.ann1.K9BQ1G Arachis hypogaea HOM05D000319 ORTHO05D003924 7.3e-18 93.6 45 97.8
arahy.Tifrunner.gnm1.ann1.JDS371 Arachis hypogaea HOM05D000319 ORTHO05D012541 1.3e-17 92.8 46 93.5
Glyma.13G218500 Glycine max HOM05D000319 ORTHO05D003924 2.8e-17 91.7 45 95.6
Glyma.15G093600 Glycine max HOM05D000319 ORTHO05D003924 2.8e-17 91.7 45 95.6
Glyma.05G140800 Glycine max HOM05D000319 ORTHO05D003924 3.6e-17 91.3 45 93.3
arahy.Tifrunner.gnm1.ann1.MYX0ZQ Arachis hypogaea HOM05D000319 ORTHO05D012541 4.8e-17 90.9 45 95.6
arahy.Tifrunner.gnm1.ann1.04NJ3D Arachis hypogaea HOM05D000319 ORTHO05D012541 6.2e-17 90.5 46 91.3
Nn3g20828 Nelumbo nucifera HOM05D000319 ORTHO05D003924 6.2e-17 90.5 45 93.3
Phvul.006G165300 Phaseolus vulgaris HOM05D000319 ORTHO05D003924 6.2e-17 90.5 45 93.3
TAR624G1128 Trochodendron aralioides HOM05D000319 ORTHO05D003924 6.2e-17 90.5 45 93.3
VMungo0540G0819 Vigna mungo HOM05D000319 ORTHO05D003924 6.2e-17 90.5 45 93.3
arahy.Tifrunner.gnm1.ann1.AQRZ09 Arachis hypogaea HOM05D000319 ORTHO05D012541 8.1e-17 90.1 46 93.5
Lj6g0003521 Lotus japonicus HOM05D000319 ORTHO05D003924 8.1e-17 90.1 45 93.3
Lalb_Chr20g0117891 Lupinus albus HOM05D000319 ORTHO05D003924 8.1e-17 90.1 45 93.3
Manes.15G122100 Manihot esculenta HOM05D000319 ORTHO05D003924 8.1e-17 90.1 45 93.3
Manes.17G070701 Manihot esculenta HOM05D000319 ORTHO05D003924 1.1e-16 89.7 45 93.3
Medtr2g019260 Medicago truncatula HOM05D000319 ORTHO05D003924 1.1e-16 89.7 45 91.1
PSO541G2488 Papaver somniferum HOM05D000319 ORTHO05D003924 1.1e-16 89.7 45 91.1
Cpa.g.sc878.1 Carica papaya HOM05D000319 ORTHO05D003924 1.4e-16 89.4 45 91.1
Glyma.15G249700 Glycine max HOM05D000319 ORTHO05D012541 1.4e-16 89.4 45 93.3
Lalb_Chr18g0055391 Lupinus albus HOM05D000319 ORTHO05D003924 1.4e-16 89.4 45 93.3
CiPaw.09G122800 Carya illinoinensis HOM05D000319 ORTHO05D003924 1.8e-16 89.0 45 91.1
MD05G1283200 Malus domestica HOM05D000319 ORTHO05D003924 2.4e-16 88.6 45 91.1
MD10G1261500 Malus domestica HOM05D000319 ORTHO05D003924 2.4e-16 88.6 45 91.1
PSO675G5949 Papaver somniferum HOM05D000319 ORTHO05D003924 2.4e-16 88.6 45 91.1
Prupe.4G081400 Prunus persica HOM05D000319 ORTHO05D003924 2.4e-16 88.6 45 91.1
PGR042G1498 Punica granatum HOM05D000319 ORTHO05D003924 2.4e-16 88.6 45 91.1
Haze_05606 Corylus avellana HOM05D000319 ORTHO05D003924 3.1e-16 88.2 45 91.1
Glyma.08G096100 Glycine max HOM05D000319 ORTHO05D003924 3.1e-16 88.2 45 88.9
Nn4g26557 Nelumbo nucifera HOM05D000319 ORTHO05D003924 3.1e-16 88.2 45 88.9
QL11p052007 Quercus lobata HOM05D000319 ORTHO05D012541 3.1e-16 88.2 45 91.1
QL11p052229 Quercus lobata HOM05D000319 ORTHO05D012541 3.1e-16 88.2 45 91.1
CDE08G0075 Ceratophyllum demersum HOM05D000319 ORTHO05D003924 4.0e-16 87.8 45 88.9
Dinv30756 Davidia involucrata HOM05D000319 ORTHO05D003924 4.0e-16 87.8 45 91.1
Dinv32244 Davidia involucrata HOM05D000319 ORTHO05D003924 4.0e-16 87.8 45 91.1
TAR626G0281 Trochodendron aralioides HOM05D000319 ORTHO05D003924 4.0e-16 87.8 45 91.1
CiPaw.10G091300 Carya illinoinensis HOM05D000319 ORTHO05D003924 5.3e-16 87.4 45 88.9
Ciclev10014310m.g Citrus clementina HOM05D000319 ORTHO05D003924 5.3e-16 87.4 45 88.9
Gohir.A06G137800 Gossypium hirsutum HOM05D000319 ORTHO05D003924 5.3e-16 87.4 45 88.9
TWI73G0864 Tripterygium wilfordii HOM05D000319 ORTHO05D003924 5.3e-16 87.4 45 88.9
GSVIVG01021502001 Vitis vinifera HOM05D000319 ORTHO05D003924 5.3e-16 87.4 45 88.9
COL.COLO4_31063 Corchorus olitorius HOM05D000319 ORTHO05D003924 6.9e-16 87.0 45 88.9
Duzib160G0315 Durio zibethinus HOM05D000319 ORTHO05D003924 6.9e-16 87.0 45 88.9
Duzib192G0511 Durio zibethinus HOM05D000319 ORTHO05D003924 6.9e-16 87.0 45 88.9
Hund17814 Selenicereus undatus HOM05D000319 ORTHO05D003924 6.9e-16 87.0 45 88.9
Thecc.06G149700 Theobroma cacao HOM05D000319 ORTHO05D003924 6.9e-16 87.0 45 88.9
AUR62002747 Chenopodium quinoa HOM05D000319 ORTHO05D003924 9.0e-16 86.7 45 86.7
AUR62030195 Chenopodium quinoa HOM05D000319 ORTHO05D003924 9.0e-16 86.7 45 86.7
Gohir.D06G143000 Gossypium hirsutum HOM05D000319 ORTHO05D003924 9.0e-16 86.7 45 88.9
Gorai.010G166800 Gossypium raimondii HOM05D000319 ORTHO05D003924 9.0e-16 86.7 45 88.9
TWI09G0761 Tripterygium wilfordii HOM05D000319 ORTHO05D003924 9.0e-16 86.7 45 88.9
arahy.Tifrunner.gnm1.ann1.503TH3 Arachis hypogaea HOM05D000319 ORTHO05D003924 1.2e-15 86.3 45 91.1
arahy.Tifrunner.gnm1.ann1.XPBU9Q Arachis hypogaea HOM05D000319 ORTHO05D003924 1.2e-15 86.3 45 91.1
CDE02G3451 Ceratophyllum demersum HOM05D000319 ORTHO05D003924 1.2e-15 86.3 45 88.9
Sed0018157 Sechium edule HOM05D000319 ORTHO05D003924 1.2e-15 86.3 46 84.8
Sc24g0001770 Simmondsia chinensis HOM05D000319 ORTHO05D003924 1.2e-15 86.3 45 88.9
CANSAT35G1549 Cannabis sativa HOM05D000319 ORTHO05D003924 1.5e-15 85.9 45 86.7
Gohir.A10G041500 Gossypium hirsutum HOM05D000319 ORTHO05D003924 1.5e-15 85.9 45 88.9
Gohir.D10G042300 Gossypium hirsutum HOM05D000319 ORTHO05D003924 1.5e-15 85.9 45 88.9
Gorai.011G044900 Gossypium raimondii HOM05D000319 ORTHO05D003924 1.5e-15 85.9 45 88.9
TAR627G0327 Trochodendron aralioides HOM05D000319 ORTHO05D003924 1.5e-15 85.9 45 86.7
Lj1A1191G70 Lonicera japonica HOM05D000319 ORTHO05D003924 2.0e-15 85.5 45 86.7
Ca_00538_v3 Cicer arietinum L. HOM05D000319 ORTHO05D003924 2.6e-15 85.1 45 88.9
Rhsim02G0158900 Rhododendron simsii HOM05D000319 ORTHO05D003924 2.6e-15 85.1 45 88.9
Sc05g0006170 Simmondsia chinensis HOM05D000319 ORTHO05D003924 2.6e-15 85.1 45 86.7
TWI53G0954 Tripterygium wilfordii HOM05D000319 ORTHO05D003924 2.6e-15 85.1 45 86.7
ATR1098G147 Amborella trichopoda HOM05D000319 ORTHO05D003924 3.4e-15 84.7 45 84.4
EL10Ac8g19675 Beta vulgaris HOM05D000319 ORTHO05D003924 3.4e-15 84.7 45 86.7
Gohir.A06G196800 Gossypium hirsutum HOM05D000319 ORTHO05D003924 3.4e-15 84.7 45 86.7
Gohir.D06G204300 Gossypium hirsutum HOM05D000319 ORTHO05D003924 3.4e-15 84.7 45 86.7
Gorai.010G238300 Gossypium raimondii HOM05D000319 ORTHO05D003924 3.4e-15 84.7 45 86.7
Psat1g188720 Pisum sativum HOM05D000319 ORTHO05D003924 3.4e-15 84.7 45 86.7
TPR.G26227 Trifolium pratense HOM05D000319 ORTHO05D003924 3.4e-15 84.7 45 88.9
Atru.chr10.1215 Acer truncatum HOM05D000319 ORTHO05D003924 4.5e-15 84.3 45 84.4
arahy.Tifrunner.gnm1.ann1.362PEU Arachis hypogaea HOM05D000319 ORTHO05D012541 4.5e-15 84.3 68 64.7
MELO3C002738.2 Cucumis melo HOM05D000319 ORTHO05D003924 4.5e-15 84.3 45 84.4
CsaV3_1G032400 Cucumis sativus L. HOM05D000319 ORTHO05D003924 4.5e-15 84.3 45 84.4
DCAR_007888 Daucus carota HOM05D000319 ORTHO05D003924 4.5e-15 84.3 45 86.7
Eucgr.E02414 Eucalyptus grandis HOM05D000319 ORTHO05D003924 4.5e-15 84.3 45 84.4
Oeu030933.1 Olea europaea HOM05D000319 ORTHO05D003924 4.5e-15 84.3 45 86.7
CSS0013078 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D003924 5.8e-15 84.0 45 84.4
CSS0037482 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D003924 5.8e-15 84.0 45 84.4
ClCG03G006820 Citrullus lanatus HOM05D000319 ORTHO05D003924 5.8e-15 84.0 45 84.4
Lj2A304T50 Lonicera japonica HOM05D000319 ORTHO05D003924 5.8e-15 84.0 45 86.7
Ah.14g086430 Amaranthus hybridus HOM05D000319 ORTHO05D003924 7.6e-15 83.6 45 82.2
CAN.G702.31 Capsicum annuum HOM05D000319 ORTHO05D003924 7.6e-15 83.6 45 86.7
Sed0009613 Sechium edule HOM05D000319 ORTHO05D003924 7.6e-15 83.6 45 84.4
vmacro10958 Vaccinium macrocarpon HOM05D000319 ORTHO05D003924 7.6e-15 83.6 45 86.7
MSTRG.13254 Avicennia marina HOM05D000319 ORTHO05D003924 9.9e-15 83.2 45 84.4
CSS0010305 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D003924 9.9e-15 83.2 45 84.4
CSS0033707 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D003924 9.9e-15 83.2 45 84.4
Solyc02g021470.4 Solanum lycopersicum HOM05D000319 ORTHO05D003924 9.9e-15 83.2 45 84.4
Sopen02g005950 Solanum pennellii HOM05D000319 ORTHO05D003924 9.9e-15 83.2 45 84.4
Migut.H01359 Erythranthe guttata HOM05D000319 ORTHO05D003924 1.3e-14 82.8 45 86.7
Sabra04G0085100 Salix brachista HOM05D000319 ORTHO05D003924 1.3e-14 82.8 45 84.4
Actinidia07702 Actinidia chinensis HOM05D000319 ORTHO05D003924 1.7e-14 82.4 45 82.2
Actinidia16707 Actinidia chinensis HOM05D000319 ORTHO05D003924 1.7e-14 82.4 45 86.7
MSTRG.14776 Avicennia marina HOM05D000319 ORTHO05D003924 1.7e-14 82.4 45 84.4
Potri.004G132900 Populus trichocarpa HOM05D000319 ORTHO05D003924 1.7e-14 82.4 45 84.4
Hma1.2p1_0020F.1_g014000 Hydrangea macrophylla HOM05D000319 ORTHO05D003924 2.2e-14 82.0 45 86.7
Ah.09g232590 Amaranthus hybridus HOM05D000319 ORTHO05D003924 2.9e-14 81.6 45 84.4
Aqoxy1G01695 Aquilegia oxysepala HOM05D000319 ORTHO05D003924 2.9e-14 81.6 45 82.2
Oeu031275.1 Olea europaea HOM05D000319 ORTHO05D003924 2.9e-14 81.6 45 82.2
Potri.011G084400 Populus trichocarpa HOM05D000319 ORTHO05D003924 2.9e-14 81.6 45 84.4
Sabra11G0066900 Salix brachista HOM05D000319 ORTHO05D003924 2.9e-14 81.6 45 84.4
CAN.G39.2 Capsicum annuum HOM05D000319 ORTHO05D003924 3.8e-14 81.3 45 82.2
FvH4_3g05480 Fragaria vesca HOM05D000319 ORTHO05D003924 3.8e-14 81.3 45 84.4
FAN11G4009 Fragaria x ananassa HOM05D000319 ORTHO05D003924 3.8e-14 81.3 45 84.4
FAN16G3086 Fragaria x ananassa HOM05D000319 ORTHO05D003924 3.8e-14 81.3 45 84.4
FAN21G3114 Fragaria x ananassa HOM05D000319 ORTHO05D003924 3.8e-14 81.3 45 84.4
Oeu034142.3 Olea europaea HOM05D000319 ORTHO05D003924 3.8e-14 81.3 45 82.2
Solyc02g070460.3 Solanum lycopersicum HOM05D000319 ORTHO05D003924 4.9e-14 80.9 45 82.2
Sopen02g019550 Solanum pennellii HOM05D000319 ORTHO05D003924 4.9e-14 80.9 45 82.2
HPP92_019548 Vanilla planifolia HOM05D000319 ORTHO05D003924 6.4e-14 80.5 45 82.2
Actinidia33698 Actinidia chinensis HOM05D000319 ORTHO05D003924 8.4e-14 80.1 45 84.4
RcHm_v2.0_Chr5g0014271 Rosa chinensis HOM05D000319 ORTHO05D003924 8.4e-14 80.1 45 82.2
SHI24899 Sapria himalayana HOM05D000319 ORTHO05D003924 1.1e-13 79.7 46 78.3
HanXRQChr04g0114291 Helianthus annuus HOM05D000319 ORTHO05D003924 1.4e-13 79.3 45 82.2
AL8G12250 Arabidopsis lyrata HOM05D000319 ORTHO05D003924 1.9e-13 79.0 45 80.0
Lsat_1_v5_gn_7_28440 Lactuca sativa HOM05D000319 ORTHO05D003924 1.9e-13 79.0 45 82.2
SGA_v2.0_scaffold106G30654 Striga asiatica HOM05D000319 ORTHO05D003924 1.9e-13 79.0 45 77.8
SGA_v2.0_scaffold51G18637 Striga asiatica HOM05D000319 ORTHO05D003924 1.9e-13 79.0 45 77.8
A06p46090 Brassica napus HOM05D000319 ORTHO05D003924 3.2e-13 78.2 45 80.0
BraA06t27474Z Brassica rapa HOM05D000319 ORTHO05D003924 3.2e-13 78.2 45 80.0
HanXRQChr15g0480871 Helianthus annuus HOM05D000319 ORTHO05D003924 3.2e-13 78.2 45 80.0
vmacro03331 Vaccinium macrocarpon HOM05D000319 ORTHO05D003924 3.2e-13 78.2 45 77.8
BcaB07g30848 Brassica carinata HOM05D000319 ORTHO05D003924 4.2e-13 77.8 45 80.0
BcaC03g16838 Brassica carinata HOM05D000319 ORTHO05D003924 4.2e-13 77.8 45 80.0
A02p29760 Brassica napus HOM05D000319 ORTHO05D003924 4.2e-13 77.8 45 80.0
C02p47170 Brassica napus HOM05D000319 ORTHO05D003924 4.2e-13 77.8 45 80.0
BolC2t10761H Brassica oleracea HOM05D000319 ORTHO05D003924 4.2e-13 77.8 45 80.0
Sp2g11070 Schrenkiella parvula HOM05D000319 ORTHO05D003924 4.2e-13 77.8 45 80.0
Aa31LG6G1000 Aethionema arabicum HOM05D000319 ORTHO05D003924 5.4e-13 77.4 45 80.0
ECA236G0438 Erigeron canadensis HOM05D000319 ORTHO05D003924 5.4e-13 77.4 45 80.0
FAN25G0737 Fragaria x ananassa HOM05D000319 ORTHO05D003924 5.4e-13 77.4 45 82.2
BraA02t07998Z Brassica rapa HOM05D000319 ORTHO05D003924 7.1e-13 77.0 45 80.0
Thhalv10000782m.g Eutrema salsugineum HOM05D000319 ORTHO05D003924 7.1e-13 77.0 45 80.0
Nitab4.5_0000717g0060 Nicotiana tabacum HOM05D000319 ORTHO05D003924 7.1e-13 77.0 45 80.0
Nitab4.5_0006498g0010 Nicotiana tabacum HOM05D000319 ORTHO05D003924 7.1e-13 77.0 45 80.0
AT5G46210 Arabidopsis thaliana HOM05D000319 ORTHO05D003924 9.3e-13 76.6 45 77.8
C07p29430 Brassica napus HOM05D000319 ORTHO05D003924 9.3e-13 76.6 45 77.8
HPP92_018622 Vanilla planifolia HOM05D000319 ORTHO05D003924 9.3e-13 76.6 47 74.5
BolC7t43491H Brassica oleracea HOM05D000319 ORTHO05D003924 1.2e-12 76.3 45 77.8
SalBow7G1096 Salvia bowleyana HOM05D000319 ORTHO05D003924 1.2e-12 76.3 45 80.0
BcaC04g21717 Brassica carinata HOM05D000319 ORTHO05D003924 1.6e-12 75.9 45 77.8
A09p22170 Brassica napus HOM05D000319 ORTHO05D003924 1.6e-12 75.9 45 77.8
C09p28330 Brassica napus HOM05D000319 ORTHO05D003924 1.6e-12 75.9 45 77.8
BolC9t55708H Brassica oleracea HOM05D000319 ORTHO05D003924 1.6e-12 75.9 45 77.8
Carub.0008s0171 Capsella rubella HOM05D000319 ORTHO05D003924 1.6e-12 75.9 45 75.6
CARHR175580 Cardamine hirsuta HOM05D000319 ORTHO05D003924 1.6e-12 75.9 45 75.6
Peaxi162Scf00307g00095 Petunia axillaris HOM05D000319 ORTHO05D003924 2.1e-12 75.5 45 77.8
SMO134G0287 Selaginella moellendorffii HOM05D000319 ORTHO05D003924 4.6e-12 74.3 45 77.8
Zm00001eb059990 Zea mays HOM05D000319 ORTHO05D003924 4.6e-12 74.3 45 73.3
Aa31LG9G6700 Aethionema arabicum HOM05D000319 ORTHO05D012541 6.0e-12 73.9 45 75.6
BraA09t37822Z Brassica rapa HOM05D000319 ORTHO05D003924 6.0e-12 73.9 45 75.6
Thhalv10024458m.g Eutrema salsugineum HOM05D000319 ORTHO05D003924 7.9e-12 73.6 45 77.8
ECA234G3264 Erigeron canadensis HOM05D000319 ORTHO05D003924 1.0e-11 73.2 45 75.6
Mapoly0043s0127 Marchantia polymorpha HOM05D000319 ORTHO05D003924 1.0e-11 73.2 45 75.6
AagrBONN_evm.TU.Sc2ySwM_228.3044 Anthoceros agrestis HOM05D000319 ORTHO05D012541 1.8e-11 72.4 45 75.6
AagrBONN_evm.TU.Sc2ySwM_344.1299 Anthoceros agrestis HOM05D000319 ORTHO05D003924 1.8e-11 72.4 45 75.6
Sp7g15740 Schrenkiella parvula HOM05D000319 ORTHO05D003924 1.8e-11 72.4 45 73.3
unitig_61.g26081 Utricularia gibba HOM05D000319 ORTHO05D003924 1.8e-11 72.4 45 75.6
Zm00001eb213380 Zea mays HOM05D000319 ORTHO05D003924 3.0e-11 71.6 45 71.1
AagrBONN_evm.TU.Sc2ySwM_344.377 Anthoceros agrestis HOM05D000319 ORTHO05D003924 5.1e-11 70.9 44 75.0
arahy.Tifrunner.gnm1.ann1.K7BN1G Arachis hypogaea HOM05D000319 ORTHO05D012541 5.1e-11 70.9 39 84.6
Pp3c12_14490 Physcomitrium patens HOM05D000319 ORTHO05D003924 6.7e-11 70.5 45 71.1
THA.LOC104806130 Tarenaya hassleriana HOM05D000319 ORTHO05D003924 6.7e-11 70.5 45 73.3
Pp3c3_20200 Physcomitrium patens HOM05D000319 ORTHO05D003924 1.1e-10 69.7 46 67.4
Pp3c4_7910 Physcomitrium patens HOM05D000319 ORTHO05D003924 2.5e-10 68.6 45 68.9
arahy.Tifrunner.gnm1.ann1.H0XPRJ Arachis hypogaea HOM05D000319 ORTHO05D012541 3.3e-10 68.2 35 88.6
CBR_g54200 Chara braunii HOM05D000319 ORTHO05D003924 8.1e-09 63.5 45 64.4
unitig_0.g929 Utricularia gibba HOM05D000319 ORTHO05D003924 6.9e-08 60.5 35 74.3
arahy.Tifrunner.gnm1.ann1.26SR0B Arachis hypogaea HOM05D000319 ORTHO05D012541 4.5e-07 57.8 28 92.9


User provided reference genes

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