Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1CH4PB Arachis hypogaea HOM05D010233 ORTHO05D010881 5.0e-92 341.3 197 100.0
arahy.Tifrunner.gnm1.ann1.YJDD6D Arachis hypogaea HOM05D010233 ORTHO05D010881 8.6e-84 313.9 158 98.7
arahy.Tifrunner.gnm1.ann1.W9E7KA Arachis hypogaea HOM05D010233 ORTHO05D010881 5.6e-83 311.2 168 94.0
arahy.Tifrunner.gnm1.ann1.PZPM74 Arachis hypogaea HOM05D010233 ORTHO05D010881 2.9e-79 298.9 178 86.5
arahy.Tifrunner.gnm1.ann1.V00IF4 Arachis hypogaea HOM05D010233 ORTHO05D010881 2.4e-78 295.8 152 96.7
arahy.Tifrunner.gnm1.ann1.MLQS0T Arachis hypogaea HOM05D010233 ORTHO05D010881 1.2e-77 293.5 152 94.7
arahy.Tifrunner.gnm1.ann1.44TLIC Arachis hypogaea HOM05D010233 ORTHO05D010881 1.2e-72 276.9 168 86.3
arahy.Tifrunner.gnm1.ann1.VFT703 Arachis hypogaea HOM05D010233 ORTHO05D010881 1.2e-72 276.9 168 86.3
arahy.Tifrunner.gnm1.ann1.XV2F0B Arachis hypogaea HOM05D010233 ORTHO05D010881 1.3e-71 273.5 171 83.6
arahy.Tifrunner.gnm1.ann1.7N24NS Arachis hypogaea HOM05D010233 ORTHO05D010881 4.6e-69 265.0 154 87.7
arahy.Tifrunner.gnm1.ann1.50SKUH Arachis hypogaea HOM05D010233 ORTHO05D010881 8.4e-55 217.6 162 77.8
arahy.Tifrunner.gnm1.ann1.QQY5CV Arachis hypogaea HOM05D010233 ORTHO05D010657 5.6e-51 204.9 168 69.0
arahy.Tifrunner.gnm1.ann1.Z4RB9J Arachis hypogaea HOM05D010233 ORTHO05D010881 1.6e-45 186.8 94 97.9
arahy.Tifrunner.gnm1.ann1.J1GCFT Arachis hypogaea HOM05D010233 ORTHO05D010881 4.6e-45 185.3 171 64.9
arahy.Tifrunner.gnm1.ann1.B5NZZ0 Arachis hypogaea HOM05D010233 ORTHO05D010881 2.4e-41 172.9 111 83.8
arahy.Tifrunner.gnm1.ann1.1S6XDY Arachis hypogaea HOM05D009970 ORTHO05D010881 5.1e-20 102.1 107 42.1
arahy.Tifrunner.gnm1.ann1.5M52G7 Arachis hypogaea HOM05D009970 ORTHO05D010881 8.8e-20 101.3 107 40.2
arahy.Tifrunner.gnm1.ann1.9Z418J Arachis hypogaea HOM05D009970 ORTHO05D010881 7.0e-17 91.7 97 41.2
arahy.Tifrunner.gnm1.ann1.Y5EAHR Arachis hypogaea HOM05D010233 ORTHO05D010657 5.2e-12 75.5 108 29.6
AUR62040042 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.7e-12 75.1 123 35.8
AUR62005044 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.1e-11 74.3 103 38.8
AUR62011603 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-11 73.9 123 35.8
AUR62028801 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-11 73.9 123 35.8
AUR62030114 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-11 73.9 123 35.8
AUR62033389 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-11 73.9 123 35.8
AUR62034832 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-11 73.9 123 35.8
AUR62035391 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-11 73.9 123 35.8
AUR62006829 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-11 73.6 123 35.0
AUR62011252 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-11 73.6 123 35.8
AUR62014237 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-11 73.6 123 35.8
AUR62030619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-11 73.6 123 35.8
AUR62035718 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.6e-11 73.2 123 35.8
arahy.Tifrunner.gnm1.ann1.PTJ2V9 Arachis hypogaea HOM05D008486 ORTHO05D010657 3.3e-11 72.8 141 30.5
AUR62034039 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.3e-11 72.8 123 35.8
AUR62043170 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.3e-11 72.8 123 35.0
AUR62043619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.3e-11 72.8 123 35.8
AUR62006070 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.4e-11 72.4 121 35.5
AUR62009195 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.4e-11 72.4 121 35.5
AUR62030064 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.7e-11 72.0 123 35.0
arahy.Tifrunner.gnm1.ann1.3XL91C Arachis hypogaea HOM05D009970 ORTHO05D010881 9.7e-11 71.2 96 31.2
AUR62034174 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.7e-11 71.2 123 35.0
arahy.Tifrunner.gnm1.ann1.4R5PNE Arachis hypogaea HOM05D008486 ORTHO05D010657 1.3e-10 70.9 100 32.0
AUR62039695 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.3e-10 70.9 123 34.1
AUR62003872 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.7e-10 70.5 123 35.0
AUR62038800 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.7e-10 70.5 98 36.7
AUR62029710 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-10 70.1 103 36.9
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 2.2e-10 70.1 135 26.7
RhsimUnG0114800 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.2e-10 70.1 124 29.8
arahy.Tifrunner.gnm1.ann1.BZ4NKF Arachis hypogaea HOM05D008486 ORTHO05D010657 2.8e-10 69.7 100 30.0
Rhsim10G0108400 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.8e-10 69.7 124 30.6
AUR62002495 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-10 69.3 104 36.5
arahy.Tifrunner.gnm1.ann1.Q04R2G Arachis hypogaea HOM05D009970 ORTHO05D010881 4.8e-10 68.9 75 42.7
arahy.Tifrunner.gnm1.ann1.B5LS3Q Arachis hypogaea HOM05D009970 ORTHO05D010881 6.3e-10 68.6 91 33.0
arahy.Tifrunner.gnm1.ann1.JPV4BZ Arachis hypogaea HOM05D010233 ORTHO05D010881 6.3e-10 68.6 41 75.6
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 6.3e-10 68.6 104 27.9
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 8.2e-10 68.2 104 25.0
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 8.2e-10 68.2 104 28.8
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.1e-09 67.8 104 32.7
arahy.Tifrunner.gnm1.ann1.8TW3UI Arachis hypogaea HOM05D009970 ORTHO05D010881 1.8e-09 67.0 89 34.8
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 1.8e-09 67.0 104 26.0
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 1.8e-09 67.0 104 26.9
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 2.4e-09 66.6 104 28.8
Rhsim02G0074000 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.4e-09 66.6 121 30.6
AUR62002595 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62005650 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62008556 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62008643 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62010442 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62011828 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62013764 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62014771 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62020656 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62024534 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62024696 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62027688 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62029074 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62029947 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62031767 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62033912 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62035885 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62035966 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62037412 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 103 35.9
AUR62038642 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62039346 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62041478 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 115 31.3
AUR62044062 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
AUR62044283 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-09 66.2 104 32.7
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.1e-09 66.2 104 27.9
arahy.Tifrunner.gnm1.ann1.RDK0TP Arachis hypogaea HOM05D008486 ORTHO05D010657 5.3e-09 65.5 124 30.6
AUR62026522 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.0e-09 65.1 78 41.0
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 7.0e-09 65.1 104 25.0
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 7.0e-09 65.1 104 24.0
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 9.1e-09 64.7 117 30.8
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 1.6e-08 63.9 104 25.0
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 1.6e-08 63.9 104 25.0
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 1.6e-08 63.9 104 25.0
AUR62025505 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-08 63.5 105 27.6
AUR62033905 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-08 63.5 104 30.8
AUR62019536 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.6e-08 63.2 105 26.7
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 3.5e-08 62.8 104 23.1
arahy.Tifrunner.gnm1.ann1.4WBN6F Arachis hypogaea HOM05D008486 ORTHO05D010657 4.5e-08 62.4 165 26.1
AUR62000408 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.5e-08 62.4 105 26.7
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 4.5e-08 62.4 104 24.0
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 4.5e-08 62.4 82 30.5
Atru.chr10.1446 Acer truncatum HOM05D004096 ORTHO05D000898 5.9e-08 62.0 71 36.6
Atru.chr5.2180 Acer truncatum HOM05D004096 ORTHO05D000898 5.9e-08 62.0 71 35.2
AUR62025921 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.9e-08 62.0 97 30.9
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 7.7e-08 61.6 104 24.0
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 7.7e-08 61.6 104 24.0
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 7.7e-08 61.6 104 24.0
arahy.Tifrunner.gnm1.ann1.02WUD4 Arachis hypogaea HOM05D008486 ORTHO05D010657 1.0e-07 61.2 78 34.6
AUR62041423 Chenopodium quinoa HOM05D002461 ORTHO05D008988 1.0e-07 61.2 97 29.9
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 1.3e-07 60.8 107 26.2
Os11g0307600 Oryza sativa ssp. japonica HOM05D002461 ORTHO05D009883 1.3e-07 60.8 116 32.8
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 1.7e-07 60.5 104 23.1
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 1.7e-07 60.5 104 23.1
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 1.7e-07 60.5 104 23.1
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 1.7e-07 60.5 104 23.1
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.7e-07 60.5 104 23.1
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.7e-07 60.5 104 23.1
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 1.7e-07 60.5 104 23.1
Ah.01g009910 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.2e-07 60.1 112 29.5
AUR62041720 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-07 60.1 108 33.3
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 2.2e-07 60.1 104 24.0
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 2.9e-07 59.7 124 26.6
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 2.9e-07 59.7 112 23.2
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 3.8e-07 59.3 107 25.2
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 3.8e-07 59.3 104 23.1
CiPaw.15G020600 Carya illinoinensis HOM05D007651 ORTHO05D001192 3.8e-07 59.3 104 23.1
AUR62013864 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.8e-07 59.3 110 37.3
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 3.8e-07 59.3 104 23.1
Rhsim09G0059600 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.8e-07 59.3 157 28.7
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 3.8e-07 59.3 104 21.2
Ah.01g011110 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.0e-07 58.9 112 27.7
AUR62003732 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.0e-07 58.9 106 33.0
AUR62007003 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.0e-07 58.9 106 33.0
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 5.0e-07 58.9 104 24.0
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 6.5e-07 58.5 104 23.1
Ah.14g083500 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.5e-07 58.5 107 29.0
Ah.16g106940 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.5e-07 58.5 107 29.0
Dinv35899 Davidia involucrata HOM05D007544 ORTHO05D009682 6.5e-07 58.5 77 36.4
arahy.Tifrunner.gnm1.ann1.0PDG3M Arachis hypogaea HOM05D010233 ORTHO05D010881 8.5e-07 58.2 48 81.2
AUR62027923 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.5e-07 58.2 106 33.0
Dinv13142 Davidia involucrata HOM05D008396 ORTHO05D000898 8.5e-07 58.2 121 28.1
AUR62013325 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.1e-06 57.8 106 33.0
AUR62013878 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.1e-06 57.8 106 33.0
AUR62032708 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.1e-06 57.8 112 28.6
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 1.1e-06 57.8 104 22.1
Ah.07g196560 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-06 57.4 113 30.1
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 1.5e-06 57.4 105 24.8
Cpa.g.sc116.14 Carica papaya HOM05D007651 ORTHO05D001192 1.5e-06 57.4 144 22.2
Dinv14442 Davidia involucrata HOM05D008396 ORTHO05D000898 1.5e-06 57.4 163 27.0
AUR62016684 Chenopodium quinoa HOM05D000554 ORTHO05D002829 1.9e-06 57.0 106 30.2
CSS0025909 Camellia sinensis var. sinensis HOM05D066949 ORTHO05D043282 2.5e-06 56.6 105 28.6
AUR62008234 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.5e-06 56.6 106 33.0
AUR62024626 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.5e-06 56.6 106 32.1
Os02g0467500 Oryza sativa ssp. japonica HOM05D007651 ORTHO05D010881 2.5e-06 56.6 121 26.4
arahy.Tifrunner.gnm1.ann1.4VG9JY Arachis hypogaea HOM05D009970 ORTHO05D010881 3.2e-06 56.2 61 31.1
AUR62002476 Chenopodium quinoa HOM05D008127 ORTHO05D000898 3.2e-06 56.2 140 27.1
Ah.05g174440 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.2e-06 55.8 113 29.2
Ah.15g098990 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.2e-06 55.8 113 29.2
Rhsim04G0115000 Rhododendron simsii HOM05D007651 ORTHO05D000898 7.2e-06 55.1 98 26.5
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 9.4e-06 54.7 131 31.3


User provided reference genes

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