Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 0.0e+00 1603.6 857 100.0
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 0.0e+00 1567.0 857 97.5
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 0.0e+00 1180.6 863 75.4
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 0.0e+00 1169.5 867 73.1
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 0.0e+00 1161.4 867 72.1
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 0.0e+00 1149.4 869 72.4
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 0.0e+00 1144.0 864 74.3
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 0.0e+00 1132.5 880 71.6
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 0.0e+00 1127.1 872 70.8
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 0.0e+00 1089.7 874 69.5
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 1.8e-303 1045.8 889 66.7
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 1.0e-290 1003.4 922 62.9
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 1.0e-282 976.9 887 63.1
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.5e-281 973.0 899 61.6
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 1.9e-273 946.0 903 58.9
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 1.1e-271 940.3 902 60.3
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 4.1e-271 938.3 872 61.4
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.1e-268 930.2 910 59.3
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 1.4e-268 929.9 847 61.4
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.9e-268 929.5 914 59.6
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 1.6e-267 926.4 892 58.1
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 8.8e-266 920.6 819 61.1
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 5.7e-265 917.9 906 57.0
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 8.2e-264 914.1 897 59.2
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 4.1e-263 911.8 931 56.5
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.2e-262 910.2 823 60.1
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 1.0e-261 907.1 793 61.7
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.7e-261 906.4 829 58.7
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 6.5e-261 904.4 827 59.5
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 3.2e-260 902.1 822 60.1
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 5.5e-260 901.4 821 61.3
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 4.7e-259 898.3 713 65.5
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 3.0e-258 895.6 804 62.2
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.5e-257 893.3 878 56.3
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 2.0e-257 892.9 885 56.8
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.7e-253 879.8 894 54.6
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 1.9e-252 876.3 891 56.9
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.2e-252 875.2 948 55.3
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 7.2e-252 874.4 891 54.9
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 4.7e-251 871.7 879 56.2
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 1.4e-250 870.2 820 57.6
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.5e-249 866.7 775 60.3
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 1.7e-248 863.2 923 53.3
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 2.2e-248 862.8 897 56.5
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 1.1e-247 860.5 796 57.4
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.6e-246 856.7 808 57.4
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 4.5e-246 855.1 891 56.9
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 5.9e-246 854.7 726 61.6
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.9e-244 849.7 749 60.6
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 3.2e-244 849.0 884 52.8
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.6e-243 846.7 892 54.3
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.4e-242 843.6 744 60.5
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 3.8e-237 825.5 819 58.5
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 1.5e-236 823.5 790 57.2
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 1.2e-235 820.5 944 49.9
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 6.8e-234 814.7 926 52.2
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 8.8e-234 814.3 808 54.3
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.1e-231 807.4 827 55.1
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 1.8e-231 806.6 900 55.0
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 2.4e-231 806.2 872 52.2
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 3.1e-231 805.8 810 54.7
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 5.4e-231 805.1 890 53.4
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 4.5e-230 802.0 808 55.9
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 5.0e-229 798.5 774 55.3
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 5.0e-229 798.5 774 55.7
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 6.6e-229 798.1 795 55.5
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 1.1e-228 797.3 724 57.7
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.1e-228 797.3 817 53.5
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.2e-227 793.9 802 54.2
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 2.8e-227 792.7 721 57.6
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 1.8e-226 790.0 718 58.2
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 2.3e-226 789.6 721 57.0
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 4.0e-226 788.9 890 50.1
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 1.5e-225 786.9 900 51.8
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 2.2e-224 783.1 738 57.3
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 7.0e-223 778.1 882 51.7
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 1.7e-221 773.5 754 56.9
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 2.3e-221 773.1 813 53.3
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 2.9e-221 772.7 761 56.0
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 1.4e-215 753.8 799 52.8
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 5.4e-215 751.9 721 56.0
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 2.7e-206 723.0 733 53.2
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 2.5e-204 716.5 711 53.6
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 4.7e-203 712.2 681 60.1
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 2.9e-200 703.0 830 48.9
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 4.6e-198 695.7 863 48.6
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 2.3e-189 666.8 641 57.3
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.1e-186 657.9 721 49.8
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 1.8e-186 657.1 700 52.4
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 1.7e-184 650.6 770 48.3
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 2.7e-182 643.3 800 47.4
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 5.1e-173 612.5 749 47.5
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 1.6e-166 590.9 585 55.0
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 2.3e-165 587.0 492 61.2
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 1.9e-164 583.9 872 42.9
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 1.0e-160 571.6 553 61.3
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 2.5e-151 540.4 478 60.0
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 2.3e-149 533.9 408 65.7
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 6.7e-149 532.3 884 42.0
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 4.8e-139 499.6 582 51.4
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 2.4e-130 470.7 401 60.3
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 1.3e-107 395.2 712 36.2
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 2.3e-93 347.8 381 54.6
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 9.8e-92 342.4 222 75.2
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 9.2e-90 335.9 475 44.2
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 1.1e-87 328.9 799 32.8
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 6.8e-85 319.7 667 32.4
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 1.7e-83 315.1 978 28.3
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 4.3e-79 300.4 1087 27.3
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 2.9e-59 234.6 223 61.9
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 2.1e-57 228.4 238 50.8
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 9.0e-53 213.0 128 77.3
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 1.6e-46 192.2 251 53.0
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.0e-40 172.9 201 48.8
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 3.7e-38 164.5 219 43.4
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 1.1e-21 109.8 63 76.2
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 4.2e-18 97.8 59 76.3
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 3.3e-15 88.2 726 26.4
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 4.4e-15 87.8 122 45.1
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.4e-13 82.8 143 46.2
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 9.1e-13 80.1 563 20.1
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.3e-11 76.3 49 77.6
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 2.2e-11 75.5 86 50.0
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 2.2e-11 75.5 86 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 5.7e-07 60.8 96 41.7


User provided reference genes

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