Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0N8L69 Arachis hypogaea HOM05D000839 ORTHO05D000664 1.1e-69 266.5 139 100.0
arahy.Tifrunner.gnm1.ann1.2NDG71 Arachis hypogaea HOM05D000839 ORTHO05D000664 5.7e-50 201.1 155 74.2
arahy.Tifrunner.gnm1.ann1.03NSXU Arachis hypogaea HOM05D000839 ORTHO05D000664 1.7e-49 199.5 149 74.5
arahy.Tifrunner.gnm1.ann1.263Z8P Arachis hypogaea HOM05D000839 ORTHO05D000664 2.9e-49 198.7 155 73.5
arahy.Tifrunner.gnm1.ann1.INL5UD Arachis hypogaea HOM05D000839 ORTHO05D000664 3.2e-48 195.3 158 72.2
arahy.Tifrunner.gnm1.ann1.T1ZYBW Arachis hypogaea HOM05D000839 ORTHO05D000664 4.1e-40 168.3 135 68.1
arahy.Tifrunner.gnm1.ann1.E0CBZR Arachis hypogaea HOM05D000839 ORTHO05D000664 6.6e-38 161.0 158 62.7
arahy.Tifrunner.gnm1.ann1.K0R7J8 Arachis hypogaea HOM05D000839 ORTHO05D000664 2.1e-36 156.0 114 75.4
Phvul.005G089600 Phaseolus vulgaris HOM05D000839 ORTHO05D000664 6.4e-33 144.4 157 51.0
Lalb_Chr22g0357211 Lupinus albus HOM05D000839 ORTHO05D000664 4.1e-32 141.7 156 50.6
QL08p014425 Quercus lobata HOM05D000839 ORTHO05D000664 7.1e-32 141.0 154 51.3
Lj3g0018221 Lotus japonicus HOM05D000839 ORTHO05D000664 9.2e-32 140.6 155 54.8
MD03G1215000 Malus domestica HOM05D000839 ORTHO05D000664 9.2e-32 140.6 156 52.6
MD11G1229700 Malus domestica HOM05D000839 ORTHO05D000664 9.2e-32 140.6 155 52.9
VMungo1080G0518 Vigna mungo HOM05D000839 ORTHO05D000664 9.2e-32 140.6 157 51.6
Glyma.12G216300 Glycine max HOM05D000839 ORTHO05D000664 6.0e-31 137.9 158 51.3
Potri.011G130533 Populus trichocarpa HOM05D000839 ORTHO05D000664 7.8e-31 137.5 155 50.3
Prupe.4G197800 Prunus persica HOM05D000839 ORTHO05D000664 1.3e-30 136.7 155 50.3
Manes.03G120832 Manihot esculenta HOM05D000839 ORTHO05D000664 1.7e-30 136.3 155 49.0
Medtr2g081930 Medicago truncatula HOM05D000839 ORTHO05D000664 3.0e-30 135.6 157 52.9
Sabra11G0117800 Salix brachista HOM05D000839 ORTHO05D000664 3.0e-30 135.6 155 49.7
TAR627G0884 Trochodendron aralioides HOM05D000839 ORTHO05D000664 5.1e-30 134.8 155 50.3
TPR.G33141 Trifolium pratense HOM05D000839 ORTHO05D000664 6.6e-30 134.4 157 54.1
CiPaw.11G180700 Carya illinoinensis HOM05D000839 ORTHO05D000664 1.1e-29 133.7 155 51.0
Ca_01781_v3 Cicer arietinum L. HOM05D000839 ORTHO05D000664 1.1e-29 133.7 155 52.9
Psat5g249000 Pisum sativum HOM05D000839 ORTHO05D000664 1.5e-29 133.3 155 52.9
Psat5g249160 Pisum sativum HOM05D000839 ORTHO05D000664 1.5e-29 133.3 159 50.3
Duzib268G0685 Durio zibethinus HOM05D000839 ORTHO05D000664 1.9e-29 132.9 154 50.0
Glyma.13G284900 Glycine max HOM05D000839 ORTHO05D000664 1.9e-29 132.9 158 50.6
Lalb_Chr01g0006231 Lupinus albus HOM05D000839 ORTHO05D000664 1.9e-29 132.9 156 51.3
GSVIVG01014555001 Vitis vinifera HOM05D000839 ORTHO05D000664 1.9e-29 132.9 155 49.7
Dinv03957 Davidia involucrata HOM05D000839 ORTHO05D000664 3.3e-29 132.1 155 50.3
TWI39G0454 Tripterygium wilfordii HOM05D000839 ORTHO05D000664 3.3e-29 132.1 156 48.1
Duzib213G0406 Durio zibethinus HOM05D000839 ORTHO05D000664 4.3e-29 131.7 154 50.6
TPR.G36803 Trifolium pratense HOM05D000839 ORTHO05D000664 5.6e-29 131.3 156 53.2
TWI39G0042 Tripterygium wilfordii HOM05D000839 ORTHO05D000664 9.5e-29 130.6 154 48.7
FAN02G4158 Fragaria x ananassa HOM05D000839 ORTHO05D000664 2.1e-28 129.4 155 47.1
FAN14G0047 Fragaria x ananassa HOM05D000839 ORTHO05D000664 2.1e-28 129.4 155 47.1
Medtr4g081490 Medicago truncatula HOM05D000839 ORTHO05D000664 2.1e-28 129.4 155 50.3
FAN05G2495 Fragaria x ananassa HOM05D000839 ORTHO05D000664 2.8e-28 129.0 155 47.1
Oeu053389.1 Olea europaea HOM05D000839 ORTHO05D000664 2.8e-28 129.0 160 50.6
Gohir.D01G059200 Gossypium hirsutum HOM05D000839 ORTHO05D000664 3.6e-28 128.6 154 53.2
Gorai.002G080200 Gossypium raimondii HOM05D000839 ORTHO05D000664 3.6e-28 128.6 154 53.2
Medtr2g081950 Medicago truncatula HOM05D000839 ORTHO05D000664 3.6e-28 128.6 155 51.0
RcHm_v2.0_Chr2g0132341 Rosa chinensis HOM05D000839 ORTHO05D000664 3.6e-28 128.6 155 47.7
CANSAT11G0476 Cannabis sativa HOM05D000839 ORTHO05D000664 4.7e-28 128.3 157 51.0
Ca_01783_v3 Cicer arietinum L. HOM05D000839 ORTHO05D000664 4.7e-28 128.3 156 46.8
FAN09G1383 Fragaria x ananassa HOM05D000839 ORTHO05D000664 4.7e-28 128.3 155 47.1
Gohir.A01G072400 Gossypium hirsutum HOM05D000839 ORTHO05D000664 8.1e-28 127.5 154 51.3
Thecc.07G059800 Theobroma cacao HOM05D000839 ORTHO05D000664 8.1e-28 127.5 154 48.7
Eucgr.F01005 Eucalyptus grandis HOM05D000839 ORTHO05D000664 1.1e-27 127.1 155 48.4
Eucgr.F01008 Eucalyptus grandis HOM05D000839 ORTHO05D000664 1.1e-27 127.1 155 48.4
Hma1.2p1_0905F.1_g235340 Hydrangea macrophylla HOM05D000839 ORTHO05D000664 1.1e-27 127.1 155 46.5
Cpa.g.sc80.119 Carica papaya HOM05D000839 ORTHO05D000664 1.8e-27 126.3 154 48.7
Eucgr.L03178 Eucalyptus grandis HOM05D000839 ORTHO05D000664 1.8e-27 126.3 155 48.4
COL.COLO4_09541 Corchorus olitorius HOM05D000839 ORTHO05D000664 2.3e-27 125.9 154 48.1
Nitab4.5_0000552g0070 Nicotiana tabacum HOM05D000839 ORTHO05D000664 4.0e-27 125.2 161 47.2
Nitab4.5_0012729g0010 Nicotiana tabacum HOM05D000839 ORTHO05D000664 4.0e-27 125.2 161 47.2
PGR083G0738 Punica granatum HOM05D000839 ORTHO05D000664 4.0e-27 125.2 152 47.4
TAR629G0964 Trochodendron aralioides HOM05D000839 ORTHO05D000664 4.0e-27 125.2 155 48.4
Ciclev10007977m.g Citrus clementina HOM05D000839 ORTHO05D000664 5.2e-27 124.8 155 45.8
Haze_09577 Corylus avellana HOM05D000839 ORTHO05D000664 5.2e-27 124.8 155 47.1
Eucgr.F00783 Eucalyptus grandis HOM05D000839 ORTHO05D000664 5.2e-27 124.8 155 47.1
Nn1g06925 Nelumbo nucifera HOM05D000839 ORTHO05D000664 5.2e-27 124.8 156 48.7
Peaxi162Scf01365g00033 Petunia axillaris HOM05D000839 ORTHO05D000664 5.2e-27 124.8 155 49.0
CAN.G162.138 Capsicum annuum HOM05D000839 ORTHO05D000664 6.8e-27 124.4 155 47.1
Cc05_g13050 Coffea canephora HOM05D000839 ORTHO05D000664 6.8e-27 124.4 134 55.2
Hma1.2p1_1054F.1_g252600 Hydrangea macrophylla HOM05D000839 ORTHO05D000664 6.8e-27 124.4 155 48.4
CsaV3_3G005710 Cucumis sativus L. HOM05D000839 ORTHO05D000664 8.9e-27 124.0 154 48.7
Eucgr.F00829 Eucalyptus grandis HOM05D000839 ORTHO05D000664 1.2e-26 123.6 155 47.1
ClCG10G006180 Citrullus lanatus HOM05D000839 ORTHO05D000664 2.0e-26 122.9 154 48.1
Lj1A861T65 Lonicera japonica HOM05D000839 ORTHO05D000664 2.0e-26 122.9 158 46.8
Sed0027275 Sechium edule HOM05D000839 ORTHO05D000664 2.0e-26 122.9 155 47.7
TPR.G35597 Trifolium pratense HOM05D000839 ORTHO05D000664 2.6e-26 122.5 155 49.0
arahy.Tifrunner.gnm1.ann1.R83HA9 Arachis hypogaea HOM05D000839 ORTHO05D000664 3.4e-26 122.1 155 47.1
HanXRQChr13g0407571 Helianthus annuus HOM05D000839 ORTHO05D000664 3.4e-26 122.1 155 47.1
Psat7g160200 Pisum sativum HOM05D000839 ORTHO05D000664 4.4e-26 121.7 155 47.7
Gohir.A13G142500 Gossypium hirsutum HOM05D000839 ORTHO05D000664 5.8e-26 121.3 154 46.1
PSO832G1601 Papaver somniferum HOM05D000839 ORTHO05D000664 5.8e-26 121.3 155 47.1
PGSC0003DMG400019233 Solanum tuberosum HOM05D000839 ORTHO05D000664 5.8e-26 121.3 155 47.7
MELO3C031857.2 Cucumis melo HOM05D000839 ORTHO05D000664 7.6e-26 120.9 154 48.1
Cpa.g.sc80.120 Carica papaya HOM05D000839 ORTHO05D000664 9.9e-26 120.6 154 45.5
Glyma.12G216400 Glycine max HOM05D000839 ORTHO05D000664 9.9e-26 120.6 158 48.7
Nitab4.5_0003620g0020 Nicotiana tabacum HOM05D000839 ORTHO05D000664 1.7e-25 119.8 155 47.1
unitig_747.g21561 Utricularia gibba HOM05D000839 ORTHO05D000664 2.2e-25 119.4 154 47.4
vmacro09599 Vaccinium macrocarpon HOM05D000839 ORTHO05D000664 2.2e-25 119.4 155 48.4
vmacro22730 Vaccinium macrocarpon HOM05D000839 ORTHO05D000664 2.2e-25 119.4 155 48.4
vmacro22762 Vaccinium macrocarpon HOM05D000839 ORTHO05D000664 2.2e-25 119.4 155 48.4
arahy.Tifrunner.gnm1.ann1.DYE5XP Arachis hypogaea HOM05D000839 ORTHO05D000664 2.9e-25 119.0 155 45.8
CSS0015337 Camellia sinensis var. sinensis HOM05D000839 ORTHO05D000664 2.9e-25 119.0 162 46.9
Gorai.013G165000 Gossypium raimondii HOM05D000839 ORTHO05D000664 3.7e-25 118.6 154 45.5
Sopen07g032070 Solanum pennellii HOM05D000839 ORTHO05D000664 4.9e-25 118.2 156 47.4
RhsimUnG0254400 Rhododendron simsii HOM05D000839 ORTHO05D000664 6.4e-25 117.9 154 48.1
arahy.Tifrunner.gnm1.ann1.ZH2YPS Arachis hypogaea HOM05D000839 ORTHO05D000664 8.4e-25 117.5 155 45.8
arahy.Tifrunner.gnm1.ann1.TJ87UR Arachis hypogaea HOM05D000839 ORTHO05D000664 1.1e-24 117.1 155 45.8
PSO210G4733 Papaver somniferum HOM05D000839 ORTHO05D000664 1.1e-24 117.1 156 46.2
TPR.G36448 Trifolium pratense HOM05D000839 ORTHO05D000664 1.1e-24 117.1 155 47.7
VMungo1127G1110 Vigna mungo HOM05D000839 ORTHO05D000664 1.4e-24 116.7 184 40.2
AUR62034194 Chenopodium quinoa HOM05D000839 ORTHO05D000664 1.9e-24 116.3 155 45.2
Glyma.06G263400 Glycine max HOM05D000839 ORTHO05D000664 1.9e-24 116.3 177 40.7
Lalb_Chr22g0357221 Lupinus albus HOM05D000839 ORTHO05D000664 1.9e-24 116.3 204 38.2
Peaxi162Scf00000g00814 Petunia axillaris HOM05D000839 ORTHO05D000664 1.9e-24 116.3 160 46.2
DCAR_022513 Daucus carota HOM05D000839 ORTHO05D000664 3.2e-24 115.5 155 45.2
Ah.04g165140 Amaranthus hybridus HOM05D000839 ORTHO05D000664 4.1e-24 115.2 161 45.3
Aqoxy1G03828 Aquilegia oxysepala HOM05D000839 ORTHO05D000664 7.1e-24 114.4 172 42.4
EL10Ac4g08002 Beta vulgaris HOM05D000839 ORTHO05D000664 1.2e-23 113.6 111 52.3
MBI02_g26226_MAGBIO Magnolia biondii HOM05D000839 ORTHO05D000664 1.2e-23 113.6 155 45.8
Gohir.D13G147200 Gossypium hirsutum HOM05D000839 ORTHO05D000664 1.6e-23 113.2 154 46.1
Aa31LG8G7450 Aethionema arabicum HOM05D000839 ORTHO05D000664 2.1e-23 112.8 156 46.2
AUR62029265 Chenopodium quinoa HOM05D000839 ORTHO05D000664 2.1e-23 112.8 155 44.5
ECA240G4758 Erigeron canadensis HOM05D000839 ORTHO05D000664 2.1e-23 112.8 154 44.2
Glyma.12G139000 Glycine max HOM05D000839 ORTHO05D000664 2.1e-23 112.8 174 41.4
Lsat_1_v5_gn_7_107740 Lactuca sativa HOM05D000839 ORTHO05D000664 2.7e-23 112.5 155 41.9
Lsat_1_v5_gn_9_94921 Lactuca sativa HOM05D000839 ORTHO05D000664 3.5e-23 112.1 155 44.5
Phvul.011G145400 Phaseolus vulgaris HOM05D000839 ORTHO05D000664 3.5e-23 112.1 183 38.8
CAN.G162.136 Capsicum annuum HOM05D000839 ORTHO05D000664 6.0e-23 111.3 157 46.5
CAN.G162.137 Capsicum annuum HOM05D000839 ORTHO05D000664 6.0e-23 111.3 157 44.6
Migut.M01826 Erythranthe guttata HOM05D000839 ORTHO05D000664 6.0e-23 111.3 156 46.8
PGSC0003DMG400019268 Solanum tuberosum HOM05D000839 ORTHO05D000664 1.7e-22 109.8 157 44.6
Eucgr.F01018 Eucalyptus grandis HOM05D000839 ORTHO05D000664 2.3e-22 109.4 143 46.2
BolC5t33079H Brassica oleracea HOM05D000839 ORTHO05D000664 3.9e-22 108.6 155 41.9
THA.LOC104798782 Tarenaya hassleriana HOM05D000839 ORTHO05D000664 3.9e-22 108.6 155 45.2
BcaB06g26133 Brassica carinata HOM05D000839 ORTHO05D000664 5.1e-22 108.2 155 41.9
A05p28130 Brassica napus HOM05D000839 ORTHO05D000664 5.1e-22 108.2 155 41.9
Sc03g0009370 Simmondsia chinensis HOM05D000839 ORTHO05D000664 6.6e-22 107.8 156 46.2
BraA05t21695Z Brassica rapa HOM05D000839 ORTHO05D000664 8.6e-22 107.5 155 41.9
Carub.0003s2064 Capsella rubella HOM05D000839 ORTHO05D000664 1.1e-21 107.1 155 41.9
BcaC05g28295 Brassica carinata HOM05D000839 ORTHO05D000664 1.5e-21 106.7 155 41.3
ECA236G0906 Erigeron canadensis HOM05D000839 ORTHO05D000664 1.5e-21 106.7 156 43.6
Thhalv10022015m.g Eutrema salsugineum HOM05D000839 ORTHO05D000664 1.5e-21 106.7 155 41.9
Solyc07g063920.3 Solanum lycopersicum HOM05D000839 ORTHO05D000664 2.5e-21 105.9 157 43.9
PGSC0003DMG400019269 Solanum tuberosum HOM05D000839 ORTHO05D000664 2.5e-21 105.9 157 43.3
CARHR096470 Cardamine hirsuta HOM05D000839 ORTHO05D000664 3.3e-21 105.5 155 41.9
Eucgr.I00079 Eucalyptus grandis HOM05D000839 ORTHO05D000664 4.3e-21 105.1 112 50.9
SGA_v2.0_scaffold495G52453 Striga asiatica HOM05D000839 ORTHO05D000664 4.3e-21 105.1 155 43.2
AL3G34560 Arabidopsis lyrata HOM05D000839 ORTHO05D000664 9.6e-21 104.0 155 41.9
Sp3g18700 Schrenkiella parvula HOM05D000839 ORTHO05D000664 9.6e-21 104.0 155 40.0
C05p43580 Brassica napus HOM05D000839 ORTHO05D000664 1.2e-20 103.6 155 40.6
TAR629G2648 Trochodendron aralioides HOM05D000839 ORTHO05D000664 1.2e-20 103.6 101 58.4
Sopen07g032060 Solanum pennellii HOM05D000839 ORTHO05D000664 3.6e-20 102.1 157 43.3
Manes.15G079000 Manihot esculenta HOM05D000839 ORTHO05D000664 6.2e-20 101.3 149 43.6
Sc03g0009360 Simmondsia chinensis HOM05D000839 ORTHO05D000664 6.2e-20 101.3 155 41.3
AUR62029266 Chenopodium quinoa HOM05D000839 ORTHO05D000664 8.1e-20 100.9 104 49.0
AT3G20660 Arabidopsis thaliana HOM05D000839 ORTHO05D000664 1.8e-19 99.8 155 40.0
MELO3C018146.2 Cucumis melo HOM05D000839 ORTHO05D000664 1.8e-19 99.8 155 40.6
CsaV3_3G022700 Cucumis sativus L. HOM05D000839 ORTHO05D000664 2.4e-19 99.4 155 41.9
Oeu060526.1 Olea europaea HOM05D000839 ORTHO05D000664 2.4e-19 99.4 101 58.4
Sc03g0009380 Simmondsia chinensis HOM05D000839 ORTHO05D000664 2.4e-19 99.4 155 43.9
ClCG05G014930 Citrullus lanatus HOM05D000839 ORTHO05D000664 3.1e-19 99.0 155 41.3
AUR62041145 Chenopodium quinoa HOM05D010307 ORTHO05D000664 4.0e-19 98.6 104 48.1
ECA236G4908 Erigeron canadensis HOM05D000839 ORTHO05D000664 5.2e-19 98.2 155 41.9
HPP92_016322 Vanilla planifolia HOM05D000839 ORTHO05D000664 1.2e-18 97.1 134 43.3
Ah.06g183200 Amaranthus hybridus HOM05D000839 ORTHO05D000664 1.5e-18 96.7 155 38.1
Sed0004837 Sechium edule HOM05D000839 ORTHO05D000664 4.4e-18 95.1 155 40.6
MBI18_g33400_MAGBIO Magnolia biondii HOM05D000839 ORTHO05D000664 5.8e-18 94.7 146 41.1
Os04g0631100 Oryza sativa ssp. japonica HOM05D000839 ORTHO05D000664 1.7e-17 93.2 151 40.4
Zm00001eb431560 Zea mays HOM05D000839 ORTHO05D000664 2.9e-17 92.4 83 59.0
Zm00001eb069630 Zea mays HOM05D000839 ORTHO05D000664 4.9e-17 91.7 86 58.1
CsaV3_3G022710 Cucumis sativus L. HOM05D000839 ORTHO05D000664 1.4e-16 90.1 134 41.0
HanXRQChr11g0332741 Helianthus annuus HOM05D000839 ORTHO05D000664 2.4e-16 89.4 134 41.0
CDE05G1178 Ceratophyllum demersum HOM05D000839 ORTHO05D000664 3.2e-16 89.0 150 40.7
ATR0804G086 Amborella trichopoda HOM05D000839 ORTHO05D000664 7.1e-16 87.8 155 37.4
MELO3C018145.2 Cucumis melo HOM05D000839 ORTHO05D000664 9.3e-16 87.4 162 36.4
HanXRQChr11g0332751 Helianthus annuus HOM05D000839 ORTHO05D000664 7.8e-15 84.3 155 36.8
SEGI_05962 Sequoiadendron giganteum HOM05D000839 ORTHO05D000664 3.0e-14 82.4 134 39.6
arahy.Tifrunner.gnm1.ann1.AN02JT Arachis hypogaea HOM05D000839 ORTHO05D000664 5.1e-14 81.6 66 66.7
HPP92_004144 Vanilla planifolia HOM05D000839 ORTHO05D000664 4.3e-13 78.6 135 35.6
SEGI_23139 Sequoiadendron giganteum HOM05D000839 ORTHO05D000664 9.6e-13 77.4 134 38.1
arahy.Tifrunner.gnm1.ann1.J5J7JZ Arachis hypogaea HOM05D000839 ORTHO05D083311 8.1e-12 74.3 53 77.4
HPP92_016544 Vanilla planifolia HOM05D000839 ORTHO05D000664 8.1e-12 74.3 83 49.4
AagrBONN_evm.TU.Sc2ySwM_228.2220 Anthoceros agrestis HOM05D000839 ORTHO05D000664 4.4e-10 68.6 137 32.8
Pp3c21_18700 Physcomitrium patens HOM05D000839 ORTHO05D000664 3.8e-09 65.5 83 41.0
Actinidia10698 Actinidia chinensis HOM05D000839 ORTHO05D000664 4.9e-09 65.1 81 46.9
Mapoly0079s0017 Marchantia polymorpha HOM05D000839 ORTHO05D000664 8.4e-09 64.3 97 40.2
Mapoly0081s0019 Marchantia polymorpha HOM05D000839 ORTHO05D000664 1.9e-08 63.2 83 42.2
Lalb_Chr22g0357251 Lupinus albus HOM05D000839 ORTHO05D000664 2.4e-08 62.8 61 49.2


User provided reference genes

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