Gene: AT3G20660

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G20660
  • Transcript Identifier AT3G20660.1
  • Gene Type Coding gene
  • Location Chr3 : 7225271-7228510 : negative

Gene Family Information

  • ID HOM05D000839
  • #Genes/#Species 711/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G20660.1
  • symbol OCT4
  • Alias AtOCT4,organic cation/carnitine transporter4
  • uniprot Q9LHQ6

Descriptions

  • Description organic cation/carnitine transporter4
  • Computational description organic cation/carnitine transporter4 (4-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: pseudogene (TAIR:AT1G73220.1); Has 27723 Blast hits to 27519 proteins in 2032 species: Archae - 544; Bacteria - 15020; Metazoa - 4940; Fungi - 4480; Plants - 1745; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
Gene Ontologytransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006811
IEA
GOA Databaseion transport
GO:0042631
IEP
Gene Ontologycellular response to water deprivation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022857
IEA
Gene Ontologytransmembrane transporter activity
GO:0022857
IEA
InterProtransmembrane transporter activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0015144
ISS
Gene Ontologycarbohydrate transmembrane transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
IEA
GOA Databasevacuole
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0009535
IDA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane2
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0009705
IDA
Gene Ontologyplant-type vacuole membrane1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036259 MFS transporter superfamily
IPR005828 Major facilitator, sugar transporter-like
Mapman id Description
24.2.2.3.2 Solute transport.carrier-mediated transport.MFS superfamily.OCT family.organic cation transporter (OCT)