Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb388540 Zea mays HOM05D019930 ORTHO05D000635 8.2e-222 773.5 405 100.0
Zm00001eb143860 Zea mays HOM05D019930 ORTHO05D000635 2.8e-137 492.7 368 78.3
Zm00001eb390010 Zea mays HOM05D019930 ORTHO05D000635 3.9e-123 445.7 361 75.3
Zm00001eb368630 Zea mays HOM05D019930 ORTHO05D000635 1.1e-117 427.6 361 72.3
Zm00001eb406660 Zea mays HOM05D019930 ORTHO05D000635 6.1e-76 288.9 197 87.3
Zm00001eb406610 Zea mays HOM05D019930 ORTHO05D000635 6.7e-75 285.4 239 75.7
Zm00001eb338300 Zea mays HOM05D001720 ORTHO05D001813 7.1e-32 142.5 96 74.0
Os02g0325600 Oryza sativa ssp. japonica HOM05D000767 ORTHO05D000635 1.9e-24 117.9 153 49.7
Os01g0208600 Oryza sativa ssp. japonica HOM05D001720 ORTHO05D001813 7.1e-24 115.9 95 58.9
Carub.0001s2493 Capsella rubella HOM05D000767 ORTHO05D000635 1.5e-13 81.6 174 33.3
MBI09_g05204_MAGBIO Magnolia biondii HOM05D000767 ORTHO05D000635 2.5e-13 80.9 146 40.4
Gohir.D12G173000 Gossypium hirsutum HOM05D000767 ORTHO05D000635 1.6e-12 78.2 149 36.9
Gorai.008G185500 Gossypium raimondii HOM05D000767 ORTHO05D000635 2.8e-12 77.4 149 37.6
PGR119G0636 Punica granatum HOM05D000767 ORTHO05D000635 4.8e-12 76.6 175 34.9
Aqoxy3G00358 Aquilegia oxysepala HOM05D000767 ORTHO05D000635 1.1e-11 75.5 145 37.9
Gohir.A12G169700 Gossypium hirsutum HOM05D000767 ORTHO05D000635 1.1e-11 75.5 149 37.6
Sp5g23770 Schrenkiella parvula HOM05D000767 ORTHO05D000635 1.1e-11 75.5 176 33.0
Manes.06G071500 Manihot esculenta HOM05D000767 ORTHO05D000635 1.2e-10 72.0 163 33.1
AL1G39750 Arabidopsis lyrata HOM05D000767 ORTHO05D000635 2.0e-10 71.2 145 35.2
Aa31sc1211G10 Aethionema arabicum HOM05D000767 ORTHO05D000635 3.4e-10 70.5 146 38.4
Nn3g17763 Nelumbo nucifera HOM05D000767 ORTHO05D000635 4.5e-10 70.1 150 38.0
Sp1g22660 Schrenkiella parvula HOM05D000767 ORTHO05D000635 4.5e-10 70.1 149 34.9
PGSC0003DMG400000828 Solanum tuberosum HOM05D000767 ORTHO05D000635 1.3e-09 68.6 154 36.4
Sopen05g005540 Solanum pennellii HOM05D000767 ORTHO05D000635 2.2e-09 67.8 156 37.2
Hma1.2p1_0862F.1_g229940 Hydrangea macrophylla HOM05D000767 ORTHO05D000635 2.9e-09 67.4 142 35.9
HPP92_021801 Vanilla planifolia HOM05D000767 ORTHO05D000635 2.9e-09 67.4 144 38.2
Cpa.g.sc1.213 Carica papaya HOM05D000767 ORTHO05D000635 3.8e-09 67.0 149 32.9
FvH4_1g15450 Fragaria vesca HOM05D000767 ORTHO05D000635 3.8e-09 67.0 157 32.5
FvH4_1g15470 Fragaria vesca HOM05D000767 ORTHO05D000635 3.8e-09 67.0 157 32.5
FAN19G1657 Fragaria x ananassa HOM05D000767 ORTHO05D000635 3.8e-09 67.0 157 32.5
Solyc05g009720.3 Solanum lycopersicum HOM05D000767 ORTHO05D000635 3.8e-09 67.0 154 36.4
HPP92_019975 Vanilla planifolia HOM05D000767 ORTHO05D000635 4.9e-09 66.6 144 37.5
Ah.02g127090 Amaranthus hybridus HOM05D000767 ORTHO05D000635 8.4e-09 65.9 163 33.7
Nn4g23748 Nelumbo nucifera HOM05D000767 ORTHO05D000635 8.4e-09 65.9 150 36.7
Prupe.1G306300 Prunus persica HOM05D000767 ORTHO05D000635 8.4e-09 65.9 177 32.2
AL2G27590 Arabidopsis lyrata HOM05D000767 ORTHO05D000635 1.1e-08 65.5 148 35.8
Sabra10G0098000 Salix brachista HOM05D000767 ORTHO05D000635 1.1e-08 65.5 154 36.4
BcaB05g24404 Brassica carinata HOM05D000767 ORTHO05D000635 1.4e-08 65.1 152 33.6
TWI31G1259 Tripterygium wilfordii HOM05D000767 ORTHO05D000635 1.4e-08 65.1 148 35.1
Atru.chr11.1341 Acer truncatum HOM05D000767 ORTHO05D000635 1.9e-08 64.7 155 32.9
HanXRQChr17g0567951 Helianthus annuus HOM05D000767 ORTHO05D000635 2.4e-08 64.3 167 33.5
MSTRG.2256 Avicennia marina HOM05D000767 ORTHO05D000635 3.2e-08 63.9 199 30.7
FAN26G0594 Fragaria x ananassa HOM05D000767 ORTHO05D000635 3.2e-08 63.9 165 32.1
THA.LOC104821960 Tarenaya hassleriana HOM05D000767 ORTHO05D000635 3.2e-08 63.9 180 33.3
Dinv21124 Davidia involucrata HOM05D000767 ORTHO05D000635 4.2e-08 63.5 155 33.5
Potri.010G128900 Populus trichocarpa HOM05D000767 ORTHO05D000635 4.2e-08 63.5 146 34.2
MSTRG.819 Avicennia marina HOM05D000767 ORTHO05D000635 5.4e-08 63.2 170 32.9
Carub.0002s1521 Capsella rubella HOM05D000767 ORTHO05D000635 5.4e-08 63.2 157 32.5
Duzib248G1037 Durio zibethinus HOM05D000767 ORTHO05D000635 5.4e-08 63.2 156 31.4
Thhalv10008115m.g Eutrema salsugineum HOM05D000767 ORTHO05D000635 5.4e-08 63.2 149 32.9
FAN07G1023 Fragaria x ananassa HOM05D000767 ORTHO05D000635 5.4e-08 63.2 149 34.9
AT1G68670 Arabidopsis thaliana HOM05D000767 ORTHO05D000635 7.1e-08 62.8 148 34.5
BcaB03g15830 Brassica carinata HOM05D000767 ORTHO05D000635 7.1e-08 62.8 163 32.5
CARHR061480 Cardamine hirsuta HOM05D000767 ORTHO05D000635 7.1e-08 62.8 145 33.8
Thhalv10018737m.g Eutrema salsugineum HOM05D000767 ORTHO05D000635 9.3e-08 62.4 151 33.8
Sc04g0006650 Simmondsia chinensis HOM05D000767 ORTHO05D000635 9.3e-08 62.4 145 36.6
ATR1100G033 Amborella trichopoda HOM05D000767 ORTHO05D000635 1.2e-07 62.0 166 30.7
Lalb_Chr02g0151731 Lupinus albus HOM05D000767 ORTHO05D000635 1.2e-07 62.0 177 31.6
MBI16_g25110_MAGBIO Magnolia biondii HOM05D000767 ORTHO05D000635 1.2e-07 62.0 165 32.7
COL.COLO4_07878 Corchorus olitorius HOM05D000767 ORTHO05D000635 1.6e-07 61.6 158 31.6
Duzib268G1649 Durio zibethinus HOM05D000767 ORTHO05D000635 1.6e-07 61.6 149 31.5
Migut.L01092 Erythranthe guttata HOM05D000767 ORTHO05D000635 1.6e-07 61.6 145 34.5
FAN28G2559 Fragaria x ananassa HOM05D000767 ORTHO05D000635 1.6e-07 61.6 160 31.9
Glyma.01G086700 Glycine max HOM05D000767 ORTHO05D000635 1.6e-07 61.6 150 30.0
Nn2g11874 Nelumbo nucifera HOM05D000767 ORTHO05D000635 1.6e-07 61.6 181 29.8
BcaC08g46320 Brassica carinata HOM05D000767 ORTHO05D000635 2.1e-07 61.2 166 31.3
C06p41180 Brassica napus HOM05D000767 ORTHO05D000635 2.1e-07 61.2 166 31.3
BolC6t39307H Brassica oleracea HOM05D000767 ORTHO05D000635 2.1e-07 61.2 166 31.3
FAN17G0808 Fragaria x ananassa HOM05D000767 ORTHO05D000635 2.1e-07 61.2 149 34.2
Cfa018621 Carpinus fangiana HOM05D000767 ORTHO05D000635 2.7e-07 60.8 149 33.6
Duzib251G0675 Durio zibethinus HOM05D000767 ORTHO05D000635 2.7e-07 60.8 149 34.2
Nn8g39325 Nelumbo nucifera HOM05D000767 ORTHO05D000635 2.7e-07 60.8 167 31.1
Hund09165 Selenicereus undatus HOM05D000767 ORTHO05D000635 2.7e-07 60.8 176 30.7
GSVIVG01011942001 Vitis vinifera HOM05D000767 ORTHO05D000635 2.7e-07 60.8 145 33.8
Pp3c20_11430 Physcomitrium patens HOM05D000767 ORTHO05D000635 3.5e-07 60.5 168 31.5
SalBow8G1915 Salvia bowleyana HOM05D000767 ORTHO05D000635 3.5e-07 60.5 147 34.7
Actinidia14858 Actinidia chinensis HOM05D000767 ORTHO05D000635 4.6e-07 60.1 145 34.5
Hund05760 Selenicereus undatus HOM05D000767 ORTHO05D000635 4.6e-07 60.1 145 33.1
Glyma.20G186500 Glycine max HOM05D000767 ORTHO05D000635 6.0e-07 59.7 148 31.1
Gohir.A07G002600 Gossypium hirsutum HOM05D000767 ORTHO05D000635 6.0e-07 59.7 156 31.4
Aqoxy3G03925 Aquilegia oxysepala HOM05D000767 ORTHO05D000635 7.9e-07 59.3 168 29.8
ECA234G4102 Erigeron canadensis HOM05D000767 ORTHO05D000635 7.9e-07 59.3 167 31.7
Ciclev10031793m.g Citrus clementina HOM05D000767 ORTHO05D000635 1.0e-06 58.9 153 33.3
Duzib150G0837 Durio zibethinus HOM05D000767 ORTHO05D000635 1.0e-06 58.9 178 29.2
SMO351G0476 Selaginella moellendorffii HOM05D000767 ORTHO05D000635 1.0e-06 58.9 147 29.3
A07p35090 Brassica napus HOM05D000767 ORTHO05D000635 1.3e-06 58.5 173 31.2
AUR62011050 Chenopodium quinoa HOM05D000767 ORTHO05D000635 1.3e-06 58.5 157 29.3
FvH4_4g27990 Fragaria vesca HOM05D000767 ORTHO05D000635 1.3e-06 58.5 177 30.5
QL01p044829 Quercus lobata HOM05D000767 ORTHO05D000635 1.3e-06 58.5 145 32.4
unitig_27.g25244 Utricularia gibba HOM05D000767 ORTHO05D000635 1.3e-06 58.5 169 33.1
Aqoxy7G01947 Aquilegia oxysepala HOM05D000767 ORTHO05D000635 1.8e-06 58.2 154 33.1
C02p25120 Brassica napus HOM05D000767 ORTHO05D000635 1.8e-06 58.2 153 32.7
Manes.14G098400 Manihot esculenta HOM05D000767 ORTHO05D000635 1.8e-06 58.2 177 28.8
Sabra08G0089100 Salix brachista HOM05D000767 ORTHO05D000635 1.8e-06 58.2 146 34.2
Gohir.D07G002900 Gossypium hirsutum HOM05D000767 ORTHO05D000635 2.3e-06 57.8 156 30.1
Ah.09g227620 Amaranthus hybridus HOM05D000767 ORTHO05D000635 3.0e-06 57.4 167 31.1
CSS0006078 Camellia sinensis var. sinensis HOM05D000767 ORTHO05D000635 3.0e-06 57.4 145 33.1
CSS0031258 Camellia sinensis var. sinensis HOM05D000767 ORTHO05D000635 3.0e-06 57.4 145 33.1
Rhsim09G0111400 Rhododendron simsii HOM05D000767 ORTHO05D000635 3.0e-06 57.4 145 34.5
TPR.G38347 Trifolium pratense HOM05D000767 ORTHO05D000635 3.0e-06 57.4 186 28.0
vmacro10535 Vaccinium macrocarpon HOM05D000767 ORTHO05D000635 3.0e-06 57.4 241 26.6
AT1G25550 Arabidopsis thaliana HOM05D000767 ORTHO05D000635 3.9e-06 57.0 178 29.8
BcaC03g14977 Brassica carinata HOM05D000767 ORTHO05D000635 3.9e-06 57.0 150 31.3
BolC2t08591H Brassica oleracea HOM05D000767 ORTHO05D000635 3.9e-06 57.0 150 31.3
ClCG05G022990 Citrullus lanatus HOM05D000767 ORTHO05D000635 3.9e-06 57.0 148 33.8
Glyma.02G098800 Glycine max HOM05D000767 ORTHO05D000635 3.9e-06 57.0 148 31.1
Gorai.001G002800 Gossypium raimondii HOM05D000767 ORTHO05D000635 3.9e-06 57.0 156 30.1
Lj5g0011154 Lotus japonicus HOM05D000767 ORTHO05D000635 3.9e-06 57.0 152 31.6
THA.LOC104808201 Tarenaya hassleriana HOM05D000767 ORTHO05D000635 3.9e-06 57.0 203 29.1
EL10Ac8g18569 Beta vulgaris HOM05D000767 ORTHO05D000635 5.1e-06 56.6 168 31.0
FAN22G2012 Fragaria x ananassa HOM05D000767 ORTHO05D000635 5.1e-06 56.6 149 32.9
Lsat_1_v5_gn_4_20080 Lactuca sativa HOM05D000767 ORTHO05D000635 5.1e-06 56.6 145 33.8
ATR0083G005 Amborella trichopoda HOM05D000767 ORTHO05D000635 6.7e-06 56.2 152 29.6
RcHm_v2.0_Chr4g0435701 Rosa chinensis HOM05D000767 ORTHO05D000635 6.7e-06 56.2 179 30.2
unitig_699.g19516 Utricularia gibba HOM05D000767 ORTHO05D000635 6.7e-06 56.2 145 31.7
VMungo1215G0175 Vigna mungo HOM05D000767 ORTHO05D000635 6.7e-06 56.2 176 29.5
Lj2g0021880 Lotus japonicus HOM05D000767 ORTHO05D000635 8.7e-06 55.8 153 33.3
HPP92_018723 Vanilla planifolia HOM05D000767 ORTHO05D000635 8.7e-06 55.8 157 34.4


User provided reference genes

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