Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.2e-172 609.8 301 100.0
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 1.7e-155 552.7 302 91.7
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 2.9e-123 445.7 268 82.8
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.6e-100 369.4 265 68.7
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 3.4e-100 369.0 311 61.7
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 2.9e-99 365.9 266 67.3
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 6.1e-97 358.2 256 69.5
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 1.0e-96 357.5 246 69.5
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 5.2e-96 355.1 307 60.3
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 8.8e-96 354.4 263 66.2
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 3.3e-95 352.4 309 59.2
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 4.4e-95 352.1 302 60.6
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 4.4e-95 352.1 305 61.6
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 7.4e-95 351.3 303 60.1
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 7.4e-95 351.3 299 61.9
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 7.4e-95 351.3 259 66.0
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 9.7e-95 350.9 260 67.7
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 1.3e-94 350.5 308 61.0
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 1.7e-94 350.1 258 68.2
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 1.7e-94 350.1 259 66.8
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 3.7e-94 349.0 312 59.6
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 3.7e-94 349.0 286 59.8
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 3.7e-94 349.0 241 69.7
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 4.8e-94 348.6 305 61.3
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 6.3e-94 348.2 264 64.8
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 6.3e-94 348.2 241 71.8
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 1.1e-93 347.4 241 71.4
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.1e-93 347.4 264 65.5
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 2.4e-93 346.3 219 74.4
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.1e-93 345.9 241 71.0
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.1e-93 345.9 241 71.0
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 3.1e-93 345.9 241 71.0
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 4.1e-93 345.5 263 65.0
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 5.3e-93 345.1 264 63.3
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 7.0e-93 344.7 267 62.9
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 7.0e-93 344.7 241 69.3
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 9.1e-93 344.4 303 60.1
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 2.0e-92 343.2 241 69.3
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 4.5e-92 342.0 304 60.2
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 7.7e-92 341.3 243 67.9
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 7.7e-92 341.3 302 59.3
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 2.2e-91 339.7 243 65.8
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 2.2e-91 339.7 243 65.8
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 2.2e-91 339.7 243 65.8
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 2.2e-91 339.7 243 65.8
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 2.9e-91 339.3 243 65.8
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 6.5e-91 338.2 248 65.3
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.1e-90 337.4 222 71.6
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.5e-90 337.0 304 59.5
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 3.2e-90 335.9 302 59.3
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 4.2e-90 335.5 241 66.4
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 5.5e-90 335.1 248 64.5
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 7.2e-90 334.7 293 58.4
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 2.7e-89 332.8 241 68.0
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 3.6e-89 332.4 263 62.7
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 3.6e-89 332.4 297 58.2
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 3.6e-89 332.4 303 58.1
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 6.1e-89 331.6 259 63.7
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.0e-88 330.9 303 57.1
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.4e-88 330.5 311 57.9
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 1.4e-88 330.5 251 63.7
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.8e-88 330.1 241 67.2
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 2.3e-88 329.7 259 62.5
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 4.0e-88 328.9 301 57.8
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 2.6e-87 326.2 250 63.2
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.6e-87 326.2 241 66.4
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 3.3e-87 325.9 307 55.0
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 4.4e-87 325.5 241 66.0
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 9.7e-87 324.3 262 61.5
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 9.7e-87 324.3 293 60.1
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 1.7e-86 323.6 247 63.6
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 4.8e-86 322.0 256 62.1
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 8.2e-86 321.2 263 60.8
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 3.1e-85 319.3 256 62.1
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 9.1e-85 317.8 300 57.3
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 9.1e-85 317.8 241 63.1
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.6e-84 317.0 267 59.6
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 2.7e-84 316.2 235 66.0
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 3.5e-84 315.8 241 62.7
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 5.9e-84 315.1 241 62.7
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 7.7e-84 314.7 291 59.5
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 7.2e-82 308.1 241 62.2
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 6.8e-80 301.6 211 67.3
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.5e-79 300.4 326 50.9
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 2.6e-79 299.7 258 58.5
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 2.8e-78 296.2 187 76.5
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 8.3e-78 294.7 244 63.1
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 2.0e-76 290.0 218 65.6
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 1.7e-75 287.0 372 46.8
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.1e-74 284.3 245 58.4
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 3.0e-72 276.2 230 59.6
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 4.0e-72 275.8 213 63.4
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 6.8e-72 275.0 265 56.2
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 2.6e-71 273.1 263 52.5
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.7e-68 263.1 210 63.8
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 4.0e-64 249.2 195 64.1
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 7.5e-63 245.0 158 74.1
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.0e-60 236.9 167 69.5
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.3e-58 229.6 209 57.9
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.3e-58 229.6 209 57.9
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 9.5e-58 228.0 200 57.5
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 8.0e-57 224.9 220 55.5
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 8.3e-54 214.9 289 43.6
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 4.1e-53 212.6 175 61.7
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 2.7e-44 183.3 130 69.2
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 6.6e-43 178.7 101 80.2
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 8.9e-40 168.3 259 40.2
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.3e-35 153.7 106 69.8
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 6.0e-28 129.0 201 36.8
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 7.4e-10 68.9 101 38.6
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 5.8e-07 59.3 56 53.6


User provided reference genes

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