Gene: Lsat_1_v5_gn_6_10880

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_10880
  • Transcript Identifier Lsat_1_v5_gn_6_10880.4
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 14919126-14927649 : positive

Gene Family Information

  • ID HOM05D003107
  • #Genes/#Species 220/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_10880.v5
  • pacid 38940477

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0015979
IEA
InterProphotosynthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009523
IEA
InterProphotosystem II
GO:0009654
IEA
InterProphotosystem II oxygen evolving complex
GO:0019898
IEA
InterProextrinsic component of membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G11450
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT5G11450
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G11450
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G11450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036575 Transcription elongation factor S-II, central domain superfamily
IPR002683 PsbP, C-terminal
IPR012921 Spen paralogue and orthologue SPOC, C-terminal
IPR003618 Transcription elongation factor S-II, central domain
IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich
Mapman id Description
15.3.7.1 RNA biosynthesis.RNA polymerase II-dependent transcription.upstream transcription pausing.regulatory protein (BDR)