Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 3.9e-72 274.6 131 100.0
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 1.0e-64 250.0 131 89.3
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 7.3e-63 243.8 117 99.1
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.5e-55 219.5 131 78.6
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 3.3e-55 218.4 131 77.9
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 7.3e-55 217.2 131 77.1
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 9.5e-55 216.9 131 77.1
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.1e-54 215.7 131 76.3
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 3.6e-54 214.9 131 77.1
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 3.6e-54 214.9 131 75.6
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 4.7e-54 214.5 131 77.1
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 4.7e-54 214.5 131 76.3
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 8.1e-54 213.8 131 77.9
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 1.1e-53 213.4 131 73.3
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.4e-53 213.0 131 76.3
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 1.4e-53 213.0 131 74.8
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 4.0e-53 211.5 131 74.0
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 5.2e-53 211.1 131 77.9
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 5.2e-53 211.1 131 77.9
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 5.2e-53 211.1 131 76.3
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 5.2e-53 211.1 131 76.3
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 6.8e-53 210.7 131 74.8
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 6.8e-53 210.7 131 74.8
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 8.9e-53 210.3 131 73.3
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 8.9e-53 210.3 131 75.6
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 1.2e-52 209.9 131 75.6
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.2e-52 209.9 131 74.8
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.2e-52 209.9 131 75.6
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 1.5e-52 209.5 131 76.3
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.5e-52 209.5 131 75.6
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.5e-52 209.5 131 73.3
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.5e-52 209.5 131 74.8
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 1.5e-52 209.5 131 74.8
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.0e-52 209.1 131 73.3
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 2.6e-52 208.8 131 73.3
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.6e-52 208.8 131 74.8
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 2.6e-52 208.8 131 74.8
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 2.6e-52 208.8 131 74.0
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 2.6e-52 208.8 131 74.0
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 2.6e-52 208.8 131 74.8
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 3.4e-52 208.4 131 75.6
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.4e-52 208.4 131 74.8
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 4.4e-52 208.0 131 74.8
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 4.4e-52 208.0 131 74.8
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 5.8e-52 207.6 131 74.8
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 5.8e-52 207.6 131 74.8
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 7.6e-52 207.2 131 74.8
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 7.6e-52 207.2 131 74.0
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 7.6e-52 207.2 131 74.8
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 9.9e-52 206.8 131 74.0
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 9.9e-52 206.8 131 73.3
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 9.9e-52 206.8 131 73.3
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 1.3e-51 206.5 131 74.8
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 1.7e-51 206.1 131 72.5
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.7e-51 206.1 131 73.3
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 2.9e-51 205.3 128 75.0
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.9e-51 205.3 131 72.5
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.9e-51 205.3 131 72.5
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 2.9e-51 205.3 131 72.5
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 3.7e-51 204.9 131 75.6
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 3.7e-51 204.9 131 74.0
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 3.7e-51 204.9 131 74.0
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 3.7e-51 204.9 131 71.0
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 6.4e-51 204.1 131 71.0
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 6.4e-51 204.1 131 71.8
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 6.4e-51 204.1 131 73.3
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 1.4e-50 203.0 131 71.8
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.9e-50 202.6 131 71.8
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 5.4e-50 201.1 131 71.8
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 7.1e-50 200.7 131 71.0
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 7.1e-50 200.7 131 72.5
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 9.2e-50 200.3 131 70.2
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 1.6e-49 199.5 131 70.2
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 7.8e-49 197.2 132 69.7
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.3e-48 196.4 131 68.7
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.3e-48 196.4 131 68.7
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 3.0e-48 195.3 131 68.7
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 3.0e-48 195.3 131 68.7
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 3.0e-48 195.3 131 68.7
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.9e-48 194.9 131 71.0
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 5.1e-48 194.5 132 68.9
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 5.1e-48 194.5 131 69.5
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 6.6e-48 194.1 131 69.5
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 6.6e-48 194.1 131 69.5
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 8.6e-48 193.7 131 69.5
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.9e-47 192.6 131 67.9
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.2e-46 189.9 131 65.6
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 1.6e-46 189.5 131 67.9
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 1.6e-46 189.5 158 60.1
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 2.1e-46 189.1 131 67.2
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 6.2e-46 187.6 132 68.2
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 8.1e-46 187.2 131 67.9
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 4.4e-44 181.4 131 68.7
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 2.2e-43 179.1 131 62.6
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.6e-41 172.9 170 52.4
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.6e-41 172.9 141 59.6
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 7.8e-41 170.6 124 69.4
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 5.1e-40 167.9 86 96.5
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 6.6e-40 167.5 110 72.7
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.1e-38 162.5 143 60.1
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.5e-36 156.4 101 69.3
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 7.6e-36 154.1 131 58.8
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 2.2e-35 152.5 109 68.8
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 3.0e-32 142.1 131 56.5
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.9e-31 139.4 90 71.1
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.9e-31 139.4 85 77.6
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 5.6e-31 137.9 85 76.5
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 9.9e-28 127.1 83 69.9
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.3e-27 126.7 87 65.5
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 2.9e-27 125.6 148 46.6
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 2.4e-26 122.5 87 64.4
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 3.2e-26 122.1 87 64.4
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 4.6e-25 118.2 148 40.5
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 7.9e-17 90.9 136 38.2
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 3.8e-11 72.0 41 80.5
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 3.9e-08 62.0 49 59.2
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 5.7e-07 58.2 131 27.5
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 5.7e-07 58.2 133 26.3
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 1.3e-06 57.0 133 27.1


User provided reference genes

Program Settings