Gene: COL.COLO4_00685

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_00685
  • Transcript Identifier COL.rna516
  • Gene Type Coding gene
  • Location AWUE01002890.1 : 82-2872 : positive

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid rna516
  • GenBank OMP13902.1
  • id gene679
  • gene_name COLO4_00685
  • uniprot A0A1R3L3I0

Descriptions

  • Description Tetrapyrrole methylase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006275
IEA
GOA Databaseregulation of DNA replication
GO:0006275
IEA
InterProregulation of DNA replication
GO:0006270
IEA
GOA DatabaseDNA replication initiation
GO:0006270
IEA
InterProDNA replication initiation
GO:0032259
IEA
GOA Databasemethylation
GO:0006260
IEA
GOA DatabaseDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003887
ISO
PLAZA Homology (enrichment)DNA-directed DNA polymerase activity HOM05D030008
GO:0008408
ISO
PLAZA Homology (enrichment)3'-5' exonuclease activity HOM05D030008
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003688
IEA
GOA DatabaseDNA replication origin binding
GO:0003688
IEA
InterProDNA replication origin binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009360
ISO
PLAZA Homology (enrichment)DNA polymerase III complex HOM05D030008
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024633 DnaA N-terminal domain
IPR013159 Chromosomal replication initiator, DnaA C-terminal
IPR010921 Trp repressor/replication initiator
IPR001957 Chromosomal replication control, initiator DnaA
IPR023485 Phosphotyrosine protein phosphatase I
IPR014776 Tetrapyrrole methylase, subdomain 2
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR035996 Tetrapyrrole methylase superfamily
IPR013317 Chromosomal replication initiator protein DnaA
IPR036196 Phosphotyrosine protein phosphatase I superfamily
IPR038454 DnaA, N-terminal domain superfamily
IPR020591 Chromosomal replication control, initiator DnaA-like
Mapman id Description
18.4.24.2 Protein modification.phosphorylation.protein tyrosine phosphatase (PTP) superfamily.PTP phosphatase (LMW)