Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb292180 Zea mays HOM05D009528 ORTHO05D443816 2.3e-63 245.4 121 100.0
Zm00001eb292190 Zea mays HOM05D009528 ORTHO05D441949 9.7e-62 240.0 121 97.5
Zm00001eb292170 Zea mays HOM05D009528 ORTHO05D443529 3.1e-60 235.0 121 95.9
Zm00001eb175370 Zea mays HOM05D009528 ORTHO05D443444 1.7e-58 229.2 121 92.6
Zm00001eb175290 Zea mays HOM05D009528 ORTHO05D444927 2.2e-58 228.8 121 92.6
Zm00001eb375630 Zea mays HOM05D009528 ORTHO05D443277 4.2e-57 224.6 121 90.9
Zm00001eb175310 Zea mays HOM05D009528 ORTHO05D446762 9.4e-57 223.4 121 90.9
Zm00001eb175340 Zea mays HOM05D009528 ORTHO05D445156 1.2e-56 223.0 121 90.9
Zm00001eb292210 Zea mays HOM05D009528 ORTHO05D443224 5.2e-55 217.6 121 86.0
Zm00001eb175360 Zea mays HOM05D009528 ORTHO05D443856 5.7e-54 214.2 113 92.0
Zm00001eb175320 Zea mays HOM05D009528 ORTHO05D446523 6.3e-53 210.7 117 88.0
Zm00001eb175330 Zea mays HOM05D009528 ORTHO05D444019 4.2e-49 198.0 96 95.8
Zm00001eb163820 Zea mays HOM05D009528 ORTHO05D013902 5.9e-27 124.4 112 57.1
Os06g0662900 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.5e-25 119.0 121 55.4
Os04g0317800 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.2e-24 116.7 121 53.7
Os06g0662500 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.2e-24 116.7 121 54.5
Os06g0662850 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.2e-24 116.7 121 54.5
Os04g0329300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.6e-24 116.3 121 53.7
Os04g0317400 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.1e-24 115.9 121 52.9
Os06g0663300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.8e-24 115.5 121 53.7
Os06g0655200 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 6.2e-24 114.4 121 53.7
Os04g0317500 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.0e-24 114.0 121 52.9
Os04g0328900 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.4e-23 113.2 110 52.7
Os06g0662600 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.8e-23 112.8 121 53.7
Os06g0662300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.2e-22 110.2 120 50.8
Os04g0329200 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.0e-22 109.4 121 52.1
Os06g0662225 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 3.4e-22 108.6 120 52.5
Os06g0662700 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 7.8e-19 97.4 101 50.5
Zm00001eb292160 Zea mays HOM05D009528 ORTHO05D442452 9.5e-17 90.5 70 60.0
Os03g0106800 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D000730 2.5e-09 65.9 100 38.0
Zm00001eb251790 Zea mays HOM05D000383 ORTHO05D000730 2.5e-09 65.9 92 39.1
Prupe.2G136500 Prunus persica HOM05D000383 ORTHO05D000730 1.2e-08 63.5 100 33.0
Zm00001eb251730 Zea mays HOM05D000383 ORTHO05D000730 1.2e-08 63.5 92 38.0
Zm00001eb251740 Zea mays HOM05D000383 ORTHO05D000730 1.2e-08 63.5 92 38.0
Zm00001eb251750 Zea mays HOM05D000383 ORTHO05D000730 1.2e-08 63.5 92 38.0
Zm00001eb251760 Zea mays HOM05D000383 ORTHO05D000730 1.2e-08 63.5 92 38.0
Zm00001eb251770 Zea mays HOM05D000383 ORTHO05D000730 1.2e-08 63.5 92 38.0
Zm00001eb130150 Zea mays HOM05D000383 ORTHO05D000730 1.1e-07 60.5 94 35.1
Zm00001eb130160 Zea mays HOM05D000383 ORTHO05D000730 2.3e-07 59.3 94 34.0
AT1G65680 Arabidopsis thaliana HOM05D000383 ORTHO05D000730 5.2e-07 58.2 100 35.0
Zm00001eb402900 Zea mays HOM05D000383 ORTHO05D000730 8.9e-07 57.4 92 33.7
Actinidia33485 Actinidia chinensis HOM05D000383 ORTHO05D000730 2.0e-06 56.2 99 30.3
Cfa012919 Carpinus fangiana HOM05D000383 ORTHO05D000730 2.0e-06 56.2 106 33.0
MD07G1113600 Malus domestica HOM05D000383 ORTHO05D000730 2.6e-06 55.8 105 28.6
HPP92_014489 Vanilla planifolia HOM05D000383 ORTHO05D000730 2.6e-06 55.8 69 40.6
Os04g0552200 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D000730 4.4e-06 55.1 99 32.3
Rhsim07G0032100 Rhododendron simsii HOM05D000383 ORTHO05D000730 5.8e-06 54.7 97 27.8
CARHR058290 Cardamine hirsuta HOM05D000383 ORTHO05D000730 9.9e-06 53.9 100 29.0
vmacro13450 Vaccinium macrocarpon HOM05D000383 ORTHO05D000730 9.9e-06 53.9 97 26.8


User provided reference genes

Program Settings