Gene: AT1G65680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G65680
  • Transcript Identifier AT1G65680.1
  • Gene Type Coding gene
  • Location Chr1 : 24427266-24428399 : positive

Gene Family Information

  • ID HOM05D000383
  • #Genes/#Species 1279/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G65680.1
  • symbol EXPB2
  • Alias ATEXPB2,expansin B2,ATHEXP BETA 1.4
  • uniprot Q9SHY6

Descriptions

  • Description expansin B2
  • Computational description expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019953
IEA
Gene Ontologysexual reproduction
GO:0019953
IEA
InterProsexual reproduction
GO:0009826
NAS
Gene Ontologyunidimensional cell growth1
GO:0009828
NAS
Gene Ontologyplant-type cell wall loosening1
GO:0071555
IEA
GOA Databasecell wall organization

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005576
IEA
InterProextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007117 Expansin, cellulose-binding-like domain
IPR036749 Expansin, cellulose-binding-like domain superfamily
IPR036908 RlpA-like domain superfamily
IPR009009 RlpA-like protein, double-psi beta-barrel domain
IPR007112 Expansin/pollen allergen, DPBB domain
IPR007118 Expansin/Lol pI
IPR005795 Major pollen allergen Lol pI
Mapman id Description
35.1 not assigned.annotated