Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 6.4e-179 630.6 304 100.0
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 9.4e-138 493.8 270 84.4
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 6.1e-129 464.5 303 71.9
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 3.0e-128 462.2 301 72.8
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 5.2e-128 461.5 300 71.3
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.5e-127 459.9 300 72.3
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.5e-127 459.9 299 70.6
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 2.6e-127 459.1 301 70.8
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.3e-127 458.8 300 70.0
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.3e-127 458.8 300 70.0
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.4e-127 458.4 300 70.0
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 7.4e-127 457.6 298 70.8
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 7.4e-127 457.6 298 70.5
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 7.4e-127 457.6 301 72.1
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 9.7e-127 457.2 300 69.7
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.7e-126 456.4 298 70.5
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.2e-126 456.1 297 71.0
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.2e-126 456.1 300 69.7
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.7e-126 455.3 286 73.4
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 4.8e-126 454.9 298 70.5
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 6.3e-126 454.5 302 71.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.4e-125 453.4 298 70.5
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.8e-125 453.0 293 72.4
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 2.4e-125 452.6 294 71.8
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 2.4e-125 452.6 298 71.5
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 4.1e-125 451.8 300 70.3
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 5.3e-125 451.4 303 70.0
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 7.0e-125 451.1 300 70.3
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 9.1e-125 450.7 297 70.0
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 9.1e-125 450.7 297 71.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 1.2e-124 450.3 303 70.0
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.2e-124 450.3 299 70.6
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.6e-124 449.9 302 67.5
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 2.0e-124 449.5 297 70.7
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 2.0e-124 449.5 301 71.1
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 3.5e-124 448.7 298 69.5
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.5e-124 448.7 300 70.0
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 3.5e-124 448.7 300 70.0
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 3.5e-124 448.7 303 70.0
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 4.5e-124 448.4 300 71.0
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.9e-123 445.7 293 71.3
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 3.8e-123 445.3 298 69.1
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 8.5e-123 444.1 300 69.0
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 1.1e-122 443.7 295 70.5
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.5e-122 443.4 301 69.1
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.5e-122 443.4 318 66.7
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.9e-122 443.0 299 69.6
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 2.5e-122 442.6 297 68.4
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 2.5e-122 442.6 293 69.3
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 3.2e-122 442.2 295 68.5
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 3.2e-122 442.2 294 70.1
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 5.5e-122 441.4 303 68.6
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 7.2e-122 441.0 301 69.1
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.2e-121 440.3 296 67.9
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 1.2e-121 440.3 303 68.6
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 2.1e-121 439.5 298 67.8
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.7e-121 439.1 316 67.1
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 2.7e-121 439.1 306 69.0
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 4.7e-121 438.3 299 67.2
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 6.1e-121 438.0 300 70.3
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 6.1e-121 438.0 301 67.1
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 6.1e-121 438.0 303 69.6
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 2.3e-120 436.0 296 67.6
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 2.3e-120 436.0 293 67.9
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 5.2e-120 434.9 297 67.3
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 5.2e-120 434.9 292 68.2
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 6.8e-120 434.5 296 67.6
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 6.8e-120 434.5 296 67.6
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 6.8e-120 434.5 296 67.6
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.2e-119 433.7 296 67.2
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.6e-119 432.6 296 67.2
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.6e-119 432.6 296 67.2
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 9.7e-119 430.6 307 65.5
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 9.7e-119 430.6 293 67.9
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.7e-118 429.9 302 66.2
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 2.2e-118 429.5 296 67.2
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 2.2e-118 429.5 296 67.9
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 1.8e-117 426.4 351 60.4
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 1.8e-117 426.4 318 64.5
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 2.4e-117 426.0 297 64.3
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 2.4e-117 426.0 299 67.9
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.6e-116 423.3 276 71.4
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.0e-116 422.9 297 68.4
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 2.7e-116 422.5 336 63.1
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 4.5e-116 421.8 293 65.9
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 5.9e-116 421.4 294 68.0
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 3.8e-115 418.7 321 62.0
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 2.5e-114 416.0 290 67.2
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 9.4e-114 414.1 296 64.5
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 2.1e-113 412.9 291 67.0
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.3e-110 403.7 262 71.4
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 3.3e-106 389.0 300 61.3
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 7.0e-101 371.3 301 60.5
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 2.7e-92 342.8 292 57.2
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 3.5e-92 342.4 288 53.8
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 7.8e-92 341.3 223 70.0
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 4.7e-89 332.0 283 54.8
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 4.0e-88 328.9 287 54.0
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 3.7e-86 322.4 197 74.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 7.1e-85 318.2 202 70.3
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.1e-80 304.3 193 71.0
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.3e-67 260.8 184 65.8
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 8.7e-67 258.1 166 71.7
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 4.0e-64 249.2 259 48.3
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.4e-53 214.2 150 62.0
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.6e-52 210.7 142 68.3
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 5.1e-43 179.1 148 60.1
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.9e-38 163.3 141 58.9
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 6.9e-32 142.1 109 61.5
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 5.0e-30 136.0 99 63.6
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.1e-29 134.8 336 28.6
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 8.2e-25 118.6 120 55.0
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 3.4e-23 113.2 243 29.6
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 8.5e-22 108.6 76 67.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 1.4e-21 107.8 294 25.9
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.5e-21 107.1 77 66.2
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.2e-21 106.3 74 71.6
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 4.2e-21 106.3 73 64.4
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.4e-08 64.7 41 70.7


User provided reference genes

Program Settings