Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 1.9e-265 918.7 484 100.0
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 5.7e-121 438.7 498 51.6
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.4e-98 364.4 502 46.6
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.4e-98 364.4 502 46.6
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 3.7e-96 356.3 479 45.7
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 8.3e-96 355.1 480 44.0
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 3.8e-93 346.3 471 44.6
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 9.5e-92 341.7 482 44.4
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 2.3e-90 337.0 477 42.1
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 1.3e-88 331.3 482 44.2
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 8.3e-88 328.6 483 43.7
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 8.3e-88 328.6 443 47.9
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 1.1e-87 328.2 489 43.4
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.2e-86 324.7 426 46.9
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 1.6e-86 324.3 476 45.2
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 2.7e-86 323.6 476 41.4
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 4.6e-86 322.8 473 41.2
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.3e-85 320.5 413 46.5
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.3e-85 320.5 414 46.1
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 3.0e-85 320.1 482 43.6
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 5.0e-85 319.3 413 46.2
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 3.3e-84 316.6 487 42.9
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 3.3e-84 316.6 472 43.9
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 7.3e-84 315.5 486 44.2
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 3.6e-83 313.2 490 42.9
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 3.6e-83 313.2 500 42.0
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 4.7e-83 312.8 440 45.9
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 4.7e-83 312.8 481 43.0
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 4.7e-83 312.8 484 43.0
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 1.1e-82 311.6 475 43.2
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 1.4e-82 311.2 475 43.6
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 1.8e-82 310.8 487 42.1
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 2.3e-82 310.5 485 44.3
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 6.8e-82 308.9 447 44.5
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 8.9e-82 308.5 485 43.9
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 8.9e-82 308.5 477 43.8
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 1.2e-81 308.1 479 44.3
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.5e-81 307.8 491 42.6
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 2.0e-81 307.4 488 40.4
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 2.6e-81 307.0 480 43.3
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 3.4e-81 306.6 459 44.7
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 4.4e-81 306.2 491 42.4
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 9.8e-81 305.1 477 42.1
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 2.2e-80 303.9 489 42.5
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 2.9e-80 303.5 484 40.9
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 3.7e-80 303.1 470 40.0
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 4.9e-80 302.8 489 41.9
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 2.4e-79 300.4 500 40.6
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 9.2e-79 298.5 482 40.9
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 3.5e-78 296.6 467 42.0
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 1.0e-77 295.0 486 41.4
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.1e-76 291.6 487 41.3
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 1.6e-75 287.7 495 40.6
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 1.6e-75 287.7 410 46.3
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 1.6e-75 287.7 478 40.8
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 8.1e-75 285.4 479 42.4
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 1.1e-74 285.0 497 41.2
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 5.2e-74 282.7 423 42.8
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 2.0e-73 280.8 473 40.6
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 2.2e-72 277.3 477 39.4
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 3.7e-72 276.6 493 39.4
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 8.3e-72 275.4 484 40.3
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 1.1e-71 275.0 414 44.4
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.1e-71 275.0 493 39.1
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 9.2e-71 271.9 495 39.2
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 3.0e-69 266.9 423 41.6
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.9e-69 266.5 471 40.1
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.9e-68 264.2 359 46.0
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 2.5e-68 263.8 408 43.6
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.5e-68 263.8 493 38.3
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 4.3e-68 263.1 418 41.1
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 7.3e-68 262.3 441 39.5
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 7.3e-68 262.3 489 39.9
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 9.5e-68 261.9 467 41.1
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 2.1e-67 260.8 496 38.1
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 2.8e-67 260.4 508 35.2
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 6.2e-67 259.2 414 44.7
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 1.8e-66 257.7 480 39.2
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 3.1e-66 256.9 486 39.1
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.0e-65 254.2 496 38.5
TAR633G0371 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.8e-65 252.7 344 44.2
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 1.3e-64 251.5 488 37.5
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 1.7e-64 251.1 475 38.5
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 2.2e-64 250.8 489 37.4
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 2.9e-64 250.4 420 40.5
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 2.9e-64 250.4 489 37.4
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.9e-64 250.4 486 38.9
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 3.8e-64 250.0 505 36.4
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 8.4e-64 248.8 414 40.8
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 1.1e-63 248.4 499 37.7
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 1.4e-63 248.1 484 38.4
Atru.chr6.2392 Acer truncatum HOM05D004871 ORTHO05D005755 4.2e-63 246.5 313 45.4
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 7.1e-63 245.7 498 37.3
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 7.1e-63 245.7 498 37.3
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 7.1e-63 245.7 333 43.8
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 7.1e-63 245.7 452 41.2
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 9.2e-63 245.4 414 41.3
GSVIVG01032408001 Vitis vinifera HOM05D004871 ORTHO05D005755 1.0e-61 241.9 252 53.2
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 1.3e-61 241.5 503 35.4
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 4.3e-60 236.5 336 42.6
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 5.6e-60 236.1 490 37.3
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 7.3e-60 235.7 407 42.8
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 1.6e-59 234.6 481 36.0
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 6.2e-59 232.6 423 39.0
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 8.1e-59 232.3 493 35.3
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.0e-58 229.9 488 37.9
Rhsim08G0049200 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.2e-57 228.4 231 52.8
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.2e-54 218.4 412 39.6
VMungo1383G0924 Vigna mungo HOM05D004871 ORTHO05D005755 2.1e-54 217.6 219 55.7
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.7e-53 214.5 487 34.3
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 2.3e-53 214.2 501 33.9
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.6e-51 208.0 296 43.6
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 2.8e-51 207.2 501 33.7
Psat3g166880 Pisum sativum HOM05D004871 ORTHO05D005755 2.8e-51 207.2 256 47.3
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 5.3e-50 203.0 273 47.3
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 4.5e-49 199.9 480 34.6
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 1.3e-48 198.4 505 32.5
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 6.4e-48 196.1 416 37.0
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 6.4e-48 196.1 416 37.0
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.6e-46 191.4 355 36.1
FAN09G0732 Fragaria x ananassa HOM05D000795 ORTHO05D005755 1.0e-45 188.7 185 53.0
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.3e-45 187.6 480 34.8
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 5.1e-45 186.4 179 54.2
Actinidia35771 Actinidia chinensis HOM05D004871 ORTHO05D005755 1.9e-44 184.5 329 39.5
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.3e-43 181.8 427 38.2
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 3.8e-40 170.2 479 31.3
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 8.4e-40 169.1 408 35.0
BcaB06g27513 Brassica carinata HOM05D004871 ORTHO05D005755 2.7e-38 164.1 371 35.8
TAR371G0343 Trochodendron aralioides HOM05D004871 ORTHO05D005755 6.0e-38 162.9 198 48.5
Rhsim08G0050300 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.1e-31 142.1 268 35.1
TAR374G1232 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.5e-31 141.0 161 53.4
ATR0589G064 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.9e-28 131.3 300 38.3
FAN27G1866 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.1e-26 125.6 130 49.2
Cc00_g26710 Coffea canephora HOM05D004871 ORTHO05D005755 1.4e-26 125.2 298 35.2
TAR629G3424 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.9e-25 119.8 242 32.6
FAN05G3698 Fragaria x ananassa HOM05D004871 ORTHO05D005755 1.3e-24 118.6 99 57.6
ATR0762G040 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.7e-24 118.2 265 38.5
CSS0034270 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 2.9e-24 117.5 99 58.6
FAN09G0037 Fragaria x ananassa HOM05D004871 ORTHO05D005755 2.9e-24 117.5 160 43.8
FAN05G3297 Fragaria x ananassa HOM05D004871 ORTHO05D005755 4.6e-22 110.2 151 42.4
BcaB07g32983 Brassica carinata HOM05D004871 ORTHO05D005755 7.9e-22 109.4 123 46.3
TPR.G1076 Trifolium pratense HOM05D004871 ORTHO05D005755 1.8e-18 98.2 413 24.9
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.2e-17 95.5 109 44.0
CSS0039002 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 1.5e-17 95.1 83 56.6
HanXRQChr07g0188231 Helianthus annuus HOM05D004871 ORTHO05D005755 1.3e-16 92.0 138 39.1
Solyc02g086440.4 Solanum lycopersicum HOM05D004871 ORTHO05D005755 3.2e-15 87.4 197 39.1
CSS0033026 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 2.3e-13 81.3 67 59.7
TAR314G0001 Trochodendron aralioides HOM05D004871 ORTHO05D005755 9.7e-12 75.9 121 40.5
FAN14G0631 Fragaria x ananassa HOM05D004871 ORTHO05D005755 3.7e-11 73.9 64 56.2
Nitab4.5_0007441g0020 Nicotiana tabacum HOM05D004871 ORTHO05D005755 3.7e-11 73.9 72 54.2
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 2.6e-09 67.8 197 31.0
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 4.5e-09 67.0 196 26.0
TAR314G0006 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.9e-08 64.3 84 45.2
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 6.5e-08 63.2 197 24.9
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 5.5e-07 60.1 157 29.9
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 1.2e-06 58.9 263 25.9


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