Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 0.0e+00 1085.5 601 100.0
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 1.3e-202 710.3 516 78.5
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 7.0e-169 598.2 610 55.2
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 3.2e-166 589.3 442 67.9
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 5.5e-166 588.6 606 53.5
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 2.7e-165 586.3 618 54.7
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 8.0e-165 584.7 639 52.6
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 8.0e-165 584.7 634 52.7
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 2.3e-164 583.2 613 54.5
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 1.5e-163 580.5 442 67.2
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.6e-163 579.7 442 66.7
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 7.5e-163 578.2 615 54.3
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 1.8e-161 573.5 438 66.4
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 9.1e-161 571.2 608 52.6
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 2.7e-160 569.7 446 63.9
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 2.7e-160 569.7 614 53.1
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 2.7e-160 569.7 606 52.6
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 1.0e-159 567.8 440 65.2
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 3.8e-159 565.8 609 53.0
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 5.0e-159 565.5 607 51.6
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 8.6e-159 564.7 440 65.5
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 8.6e-159 564.7 607 51.7
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 1.1e-158 564.3 607 52.4
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.2e-158 562.8 603 51.1
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 5.5e-158 562.0 638 53.4
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 7.2e-158 561.6 442 63.8
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 1.6e-157 560.5 608 52.5
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.6e-157 559.3 439 64.0
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 6.1e-157 558.5 653 50.7
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.0e-156 557.8 653 50.8
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.4e-156 557.4 439 63.8
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.4e-156 557.4 395 69.9
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 5.2e-156 555.4 610 52.1
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 8.8e-156 554.7 608 52.0
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 2.0e-155 553.5 649 51.9
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 2.0e-155 553.5 439 64.9
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 3.4e-155 552.7 619 50.7
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 9.8e-155 551.2 440 63.0
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 1.7e-154 550.4 606 52.0
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 3.7e-154 549.3 651 49.6
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 8.3e-154 548.1 635 52.0
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 1.8e-153 547.0 624 52.4
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 4.1e-153 545.8 420 63.8
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 3.5e-152 542.7 440 64.1
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 4.5e-152 542.3 440 62.7
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-151 540.0 464 61.0
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 3.8e-151 539.3 487 58.1
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 2.5e-150 536.6 431 64.5
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 2.5e-150 536.6 613 49.4
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 5.6e-150 535.4 623 50.6
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 3.6e-149 532.7 436 61.9
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 8.0e-149 531.6 461 60.7
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 8.0e-149 531.6 441 62.6
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 1.0e-148 531.2 392 68.1
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 3.0e-148 529.6 423 65.0
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.0e-148 529.6 442 61.5
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 1.2e-147 527.7 636 50.5
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 2.6e-147 526.6 615 48.6
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 4.9e-146 522.3 419 63.2
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 1.4e-145 520.8 677 47.4
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 5.4e-145 518.8 653 47.5
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 3.5e-144 516.2 431 60.1
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 6.6e-143 511.9 611 47.3
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 1.1e-142 511.1 610 47.7
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 1.9e-142 510.4 614 47.4
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 7.3e-142 508.4 404 64.1
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 1.2e-141 507.7 442 61.3
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 2.8e-141 506.5 451 60.8
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 8.0e-141 505.0 429 59.9
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 2.3e-140 503.4 632 48.4
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 3.1e-140 503.1 624 48.2
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 8.9e-140 501.5 553 52.4
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.6e-139 500.0 373 66.0
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 5.8e-139 498.8 377 67.6
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 6.4e-138 495.4 431 58.9
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 8.3e-138 495.0 410 61.0
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 6.0e-136 488.8 440 58.4
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 8.9e-132 474.9 661 43.4
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 8.9e-132 474.9 576 49.0
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 8.9e-132 474.9 402 61.7
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 5.8e-131 472.2 615 48.1
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 7.5e-131 471.9 674 47.0
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 3.7e-130 469.5 407 59.2
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 1.1e-129 468.0 647 45.7
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 3.6e-125 453.0 601 48.1
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 3.1e-124 449.9 425 52.5
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 3.1e-124 449.9 413 57.6
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 4.0e-124 449.5 359 62.7
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 2.0e-123 447.2 402 58.0
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 2.0e-123 447.2 607 45.8
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 2.0e-123 447.2 492 50.8
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 5.4e-121 439.1 604 44.2
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 5.6e-118 429.1 365 60.5
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 7.6e-115 418.7 432 52.1
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 1.2e-112 411.4 441 51.5
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 6.0e-112 409.1 406 54.7
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.8e-108 397.5 489 47.2
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 8.4e-106 388.7 443 48.8
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 2.1e-104 384.0 288 67.7
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 9.6e-102 375.2 571 41.2
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 3.8e-98 363.2 342 55.0
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 3.8e-98 363.2 401 49.4
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 9.3e-97 358.6 348 57.8
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 1.0e-90 338.6 465 45.2
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 6.0e-88 329.3 279 63.4
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 6.7e-87 325.9 410 46.6
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 6.3e-85 319.3 550 41.8
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.4e-84 318.2 756 34.7
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 5.3e-84 316.2 409 46.9
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 1.0e-82 312.0 418 47.8
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 2.8e-69 267.3 417 42.0
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 3.1e-68 263.8 212 59.9
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 5.9e-67 259.6 408 43.1
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 1.3e-66 258.5 225 58.2
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 6.5e-66 256.1 195 67.2
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.1e-57 228.8 325 42.2
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.6e-56 224.9 223 53.4
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 2.7e-56 224.2 352 38.9
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 8.0e-56 222.6 567 34.4
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 1.8e-55 221.5 169 63.3
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 2.6e-54 217.6 188 61.7
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 2.2e-53 214.5 164 64.6
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 5.3e-52 209.9 177 57.1
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 2.0e-51 208.0 162 62.3
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 7.2e-49 199.5 161 60.9
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 1.0e-47 195.7 292 43.2
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 6.3e-45 186.4 386 32.4
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.1e-41 175.6 145 57.9
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 3.6e-40 170.6 380 33.4
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.0e-38 164.9 136 66.9
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 5.7e-38 163.3 324 36.4
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 4.9e-37 160.2 175 52.6
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 9.2e-36 156.0 157 56.7
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 6.6e-34 149.8 132 63.6
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 9.5e-33 146.0 120 59.2
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 4.7e-32 143.7 145 50.3
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 8.0e-32 142.9 120 65.0
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 2.4e-28 131.3 134 50.0
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 6.0e-27 126.7 135 50.4
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 1.7e-26 125.2 60 96.7
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 1.7e-26 125.2 60 96.7
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 3.9e-26 124.0 488 23.6
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 5.0e-26 123.6 60 95.0
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 8.6e-26 122.9 86 66.3
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 3.6e-24 117.5 239 34.3
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 3.6e-24 117.5 239 34.3
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 1.1e-20 105.9 68 77.9
Os03g0715332 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 3.2e-20 104.4 56 87.5
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.2e-19 102.4 276 30.8
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 1.8e-15 88.6 63 69.8
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-15 88.2 85 54.1
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-15 88.2 85 54.1
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-15 88.2 85 54.1
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-15 88.2 85 54.1
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 4.0e-15 87.4 84 56.0
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 1.2e-14 85.9 110 47.3
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 7.5e-14 83.2 147 38.8
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 9.9e-14 82.8 86 51.2
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 4.9e-13 80.5 54 70.4
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 1.4e-12 79.0 71 56.3
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 1.9e-12 78.6 89 49.4
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 7.1e-12 76.6 254 28.0
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.1e-11 75.1 52 75.0
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 3.9e-10 70.9 57 59.6
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 5.1e-10 70.5 51 56.9
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 5.1e-10 70.5 81 45.7
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 8.6e-10 69.7 64 53.1
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 1.9e-09 68.6 53 66.0
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 7.3e-09 66.6 65 53.8
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 3.6e-08 64.3 52 63.5
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 1.1e-07 62.8 39 66.7
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 5.2e-07 60.5 36 72.2
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 7.6e-06 56.6 40 72.5
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 9.9e-06 56.2 56 57.1


User provided reference genes

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