Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb175370 Zea mays HOM05D009528 ORTHO05D443444 6.7e-63 243.8 121 100.0
Zm00001eb175290 Zea mays HOM05D009528 ORTHO05D444927 2.2e-61 238.8 121 97.5
Zm00001eb175340 Zea mays HOM05D009528 ORTHO05D445156 2.4e-60 235.3 121 96.7
Zm00001eb175310 Zea mays HOM05D009528 ORTHO05D446762 1.6e-59 232.6 121 95.0
Zm00001eb292180 Zea mays HOM05D009528 ORTHO05D443816 1.7e-58 229.2 121 92.6
Zm00001eb292170 Zea mays HOM05D009528 ORTHO05D443529 6.5e-58 227.3 121 91.7
Zm00001eb292190 Zea mays HOM05D009528 ORTHO05D441949 8.5e-58 226.9 121 91.7
Zm00001eb375630 Zea mays HOM05D009528 ORTHO05D443277 1.9e-57 225.7 121 90.9
Zm00001eb175360 Zea mays HOM05D009528 ORTHO05D443856 2.5e-57 225.3 113 97.3
Zm00001eb175320 Zea mays HOM05D009528 ORTHO05D446523 5.2e-55 217.6 117 91.5
Zm00001eb292210 Zea mays HOM05D009528 ORTHO05D443224 2.0e-54 215.7 121 85.1
Zm00001eb175330 Zea mays HOM05D009528 ORTHO05D444019 1.0e-50 203.4 96 100.0
Zm00001eb163820 Zea mays HOM05D009528 ORTHO05D013902 3.0e-26 122.1 115 54.8
Os04g0329300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.8e-24 115.5 121 53.7
Os04g0317400 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 3.6e-24 115.2 121 52.9
Os04g0317800 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 6.2e-24 114.4 121 52.9
Os06g0662500 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.0e-24 114.0 121 53.7
Os06g0662850 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.0e-24 114.0 121 53.7
Os04g0317500 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.4e-23 113.2 121 52.9
Os06g0662900 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.4e-23 113.2 121 53.7
Os06g0655200 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.8e-23 112.8 121 52.9
Os06g0663300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.8e-23 112.8 121 52.9
Os06g0662300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 6.8e-23 110.9 120 51.7
Os06g0662225 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.9e-23 110.5 120 53.3
Os06g0662600 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.2e-22 110.2 121 52.9
Os04g0329200 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 3.4e-22 108.6 121 52.1
Os04g0328900 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 5.8e-22 107.8 108 50.9
Os06g0662700 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 6.6e-18 94.4 101 49.5
Zm00001eb292160 Zea mays HOM05D009528 ORTHO05D442452 5.6e-17 91.3 59 67.8
Os03g0106800 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D000730 7.3e-09 64.3 100 36.0
Zm00001eb251790 Zea mays HOM05D000383 ORTHO05D000730 9.5e-09 63.9 92 38.0
Zm00001eb251730 Zea mays HOM05D000383 ORTHO05D000730 4.7e-08 61.6 92 37.0
Zm00001eb251740 Zea mays HOM05D000383 ORTHO05D000730 4.7e-08 61.6 92 37.0
Zm00001eb251750 Zea mays HOM05D000383 ORTHO05D000730 4.7e-08 61.6 92 37.0
Zm00001eb251760 Zea mays HOM05D000383 ORTHO05D000730 4.7e-08 61.6 92 37.0
Zm00001eb251770 Zea mays HOM05D000383 ORTHO05D000730 4.7e-08 61.6 92 37.0
Prupe.2G136500 Prunus persica HOM05D000383 ORTHO05D000730 6.2e-08 61.2 100 32.0
Zm00001eb130150 Zea mays HOM05D000383 ORTHO05D000730 6.2e-08 61.2 94 35.1
Zm00001eb130160 Zea mays HOM05D000383 ORTHO05D000730 6.2e-08 61.2 94 35.1
HPP92_014489 Vanilla planifolia HOM05D000383 ORTHO05D000730 1.2e-06 57.0 72 40.3
Zm00001eb402900 Zea mays HOM05D000383 ORTHO05D000730 1.2e-06 57.0 92 33.7
Cfa012919 Carpinus fangiana HOM05D000383 ORTHO05D000730 5.8e-06 54.7 95 33.7
AT1G65680 Arabidopsis thaliana HOM05D000383 ORTHO05D000730 7.6e-06 54.3 100 32.0
Zm00001eb000380 Zea mays HOM05D000383 ORTHO05D000730 7.6e-06 54.3 99 29.3
Actinidia33485 Actinidia chinensis HOM05D000383 ORTHO05D000730 9.9e-06 53.9 99 29.3


User provided reference genes

Program Settings