Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb175330 Zea mays HOM05D009528 ORTHO05D444019 4.4e-58 227.6 107 100.0
Zm00001eb175290 Zea mays HOM05D009528 ORTHO05D444927 6.8e-51 203.8 96 100.0
Zm00001eb175370 Zea mays HOM05D009528 ORTHO05D443444 6.8e-51 203.8 96 100.0
Zm00001eb175310 Zea mays HOM05D009528 ORTHO05D446762 4.4e-50 201.1 96 99.0
Zm00001eb175340 Zea mays HOM05D009528 ORTHO05D445156 5.8e-50 200.7 96 99.0
Zm00001eb292170 Zea mays HOM05D009528 ORTHO05D443529 9.9e-50 199.9 96 96.9
Zm00001eb375630 Zea mays HOM05D009528 ORTHO05D443277 1.3e-49 199.5 96 95.8
Zm00001eb292180 Zea mays HOM05D009528 ORTHO05D443816 2.2e-49 198.7 96 95.8
Zm00001eb292190 Zea mays HOM05D009528 ORTHO05D441949 2.2e-49 198.7 96 95.8
Zm00001eb175320 Zea mays HOM05D009528 ORTHO05D446523 1.3e-46 189.5 96 93.8
Zm00001eb175360 Zea mays HOM05D009528 ORTHO05D443856 1.3e-46 189.5 88 100.0
Zm00001eb292210 Zea mays HOM05D009528 ORTHO05D443224 2.3e-46 188.7 96 89.6
Zm00001eb163820 Zea mays HOM05D009528 ORTHO05D013902 6.7e-22 107.5 90 57.8
Os04g0329300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.8e-20 102.1 95 53.7
Os06g0662900 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.8e-20 102.1 95 54.7
Os04g0317400 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 3.7e-20 101.7 95 52.6
Os04g0317800 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 6.2e-20 100.9 95 52.6
Os04g0317500 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.1e-20 100.5 95 53.7
Os06g0662500 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.1e-20 100.5 95 53.7
Os06g0662850 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.1e-20 100.5 95 53.7
Os06g0663300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 8.1e-20 100.5 95 53.7
Os04g0329200 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.4e-19 99.8 95 53.7
Os06g0662300 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.4e-19 99.8 94 53.2
Os06g0662600 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 2.4e-19 99.0 95 53.7
Os04g0328900 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 4.0e-19 98.2 95 51.6
Os06g0655200 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 5.3e-19 97.8 95 51.6
Os06g0662225 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 1.2e-18 96.7 94 53.2
Zm00001eb292160 Zea mays HOM05D009528 ORTHO05D442452 4.9e-17 91.3 59 67.8
Os06g0662700 Oryza sativa ssp. japonica HOM05D009528 ORTHO05D013902 3.2e-16 88.6 95 49.5
Zm00001eb251790 Zea mays HOM05D000383 ORTHO05D000730 6.5e-09 64.3 92 38.0
Os03g0106800 Oryza sativa ssp. japonica HOM05D000383 ORTHO05D000730 1.4e-08 63.2 113 33.6
Prupe.2G136500 Prunus persica HOM05D000383 ORTHO05D000730 1.9e-08 62.8 114 30.7
Zm00001eb130150 Zea mays HOM05D000383 ORTHO05D000730 3.2e-08 62.0 94 35.1
Zm00001eb130160 Zea mays HOM05D000383 ORTHO05D000730 3.2e-08 62.0 94 35.1
Zm00001eb251730 Zea mays HOM05D000383 ORTHO05D000730 3.2e-08 62.0 92 37.0
Zm00001eb251740 Zea mays HOM05D000383 ORTHO05D000730 3.2e-08 62.0 92 37.0
Zm00001eb251750 Zea mays HOM05D000383 ORTHO05D000730 3.2e-08 62.0 92 37.0
Zm00001eb251760 Zea mays HOM05D000383 ORTHO05D000730 3.2e-08 62.0 92 37.0
Zm00001eb251770 Zea mays HOM05D000383 ORTHO05D000730 3.2e-08 62.0 92 37.0
Cfa012919 Carpinus fangiana HOM05D000383 ORTHO05D000730 4.6e-07 58.2 109 33.0
Zm00001eb402900 Zea mays HOM05D000383 ORTHO05D000730 7.9e-07 57.4 92 33.7
HPP92_014489 Vanilla planifolia HOM05D000383 ORTHO05D000730 1.0e-06 57.0 72 40.3
MD07G1113600 Malus domestica HOM05D000383 ORTHO05D000730 2.3e-06 55.8 111 27.9
Zm00001eb000380 Zea mays HOM05D000383 ORTHO05D000730 3.9e-06 55.1 113 28.3
Actinidia33485 Actinidia chinensis HOM05D000383 ORTHO05D000730 5.1e-06 54.7 113 28.3
AT1G65680 Arabidopsis thaliana HOM05D000383 ORTHO05D000730 5.1e-06 54.7 100 32.0
FAN06G3176 Fragaria x ananassa HOM05D000383 ORTHO05D000730 5.1e-06 54.7 105 32.4
Haze_21274 Corylus avellana HOM05D000383 ORTHO05D000730 6.7e-06 54.3 112 28.6


User provided reference genes

Program Settings