Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 5.3e-295 1016.9 510 100.0
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 6.7e-205 717.6 450 80.0
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.2e-140 504.2 439 57.6
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 1.9e-138 496.9 458 55.7
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 9.2e-138 494.6 440 56.8
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 2.1e-137 493.4 463 55.5
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 6.0e-137 491.9 456 54.6
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 1.7e-136 490.3 454 55.3
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.3e-136 490.0 442 55.7
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 6.6e-136 488.4 442 55.4
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 1.5e-135 487.3 407 60.0
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 1.9e-135 486.9 443 54.0
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 3.3e-135 486.1 441 56.0
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 9.5e-135 484.6 432 55.6
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 1.6e-134 483.8 432 55.3
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.6e-134 483.8 419 58.0
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.6e-134 482.6 459 54.9
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 4.7e-134 482.3 431 55.7
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.8e-133 480.3 442 54.5
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 3.1e-133 479.6 436 55.3
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 3.1e-133 479.6 436 55.3
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 6.8e-133 478.4 470 52.6
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 8.9e-133 478.0 441 55.1
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 8.9e-133 478.0 460 55.9
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 2.0e-132 476.9 443 52.1
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 2.6e-132 476.5 431 55.5
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 2.6e-132 476.5 465 52.3
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 3.4e-132 476.1 442 53.4
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 5.8e-132 475.3 442 52.7
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 5.8e-132 475.3 435 54.7
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 9.9e-132 474.6 444 53.4
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.7e-131 473.8 432 53.9
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 3.8e-131 472.6 444 55.2
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 4.9e-131 472.2 436 54.4
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 4.9e-131 472.2 478 50.0
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 6.4e-131 471.9 432 53.2
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 6.4e-131 471.9 439 54.0
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 1.4e-130 470.7 407 56.5
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 3.2e-130 469.5 444 54.7
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 9.2e-130 468.0 435 53.3
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 1.6e-129 467.2 435 53.6
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.6e-129 467.2 456 51.3
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 6.0e-129 465.3 444 53.4
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 6.0e-129 465.3 448 54.7
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 6.0e-129 465.3 432 53.5
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 5.1e-128 462.2 405 54.1
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 5.1e-128 462.2 446 53.6
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 5.1e-128 462.2 448 52.5
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 8.7e-128 461.5 445 54.2
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 8.7e-128 461.5 470 50.9
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 1.1e-127 461.1 438 53.4
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 2.8e-126 456.4 440 53.6
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 1.1e-125 454.5 431 52.4
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 4.0e-125 452.6 439 51.5
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 5.2e-125 452.2 431 52.7
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 6.9e-125 451.8 441 51.9
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 2.6e-124 449.9 439 51.5
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 4.4e-124 449.1 433 51.5
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 9.9e-124 448.0 435 51.5
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 9.9e-124 448.0 442 51.6
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 1.3e-123 447.6 428 53.0
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.2e-123 446.8 442 51.4
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 2.9e-123 446.4 437 51.5
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 3.8e-123 446.0 438 52.5
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 1.4e-122 444.1 442 51.4
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 2.4e-122 443.4 438 50.9
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 4.2e-122 442.6 394 54.1
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.6e-121 440.7 437 50.6
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 4.6e-121 439.1 405 53.1
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 3.9e-120 436.0 433 51.0
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 3.9e-120 436.0 397 54.9
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 5.1e-120 435.6 433 51.5
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 1.9e-119 433.7 433 50.1
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 2.5e-119 433.3 433 51.0
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 4.3e-119 432.6 433 50.6
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.3e-118 431.0 433 52.2
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 2.4e-117 426.8 433 50.8
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 1.3e-115 421.0 531 44.4
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 4.2e-114 416.0 444 50.5
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 7.1e-114 415.2 464 47.4
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.9e-107 392.5 450 48.4
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 4.6e-105 386.0 454 46.5
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.0e-104 384.8 343 54.2
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 2.0e-100 370.5 361 51.0
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 1.1e-98 364.8 394 47.2
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.2e-98 363.2 450 45.8
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 4.2e-98 362.8 362 52.5
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 6.0e-97 359.0 733 34.1
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 7.9e-97 358.6 307 56.7
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 6.7e-96 355.5 328 54.0
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 2.5e-95 353.6 317 54.9
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 5.7e-95 352.4 445 44.7
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 3.4e-92 343.2 380 48.2
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 1.4e-88 331.3 305 52.5
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.5e-87 327.0 416 43.8
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.1e-82 311.6 318 51.6
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 2.3e-80 303.9 315 50.8
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 3.9e-80 303.1 235 60.9
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 2.6e-79 300.4 308 51.6
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.2e-73 281.6 400 42.5
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 3.9e-72 276.6 331 44.7
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.6e-71 273.9 301 48.2
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 2.0e-68 264.2 307 45.6
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 9.7e-63 245.4 351 40.2
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 3.6e-57 226.9 175 56.6
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 3.5e-52 210.3 223 52.9
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.3e-51 208.4 226 50.0
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.7e-51 208.0 251 47.0
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 6.1e-49 199.5 172 60.5
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 8.9e-48 195.7 219 48.4
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 5.4e-45 186.4 226 46.0
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 2.7e-44 184.1 214 48.1
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 5.2e-40 169.9 126 63.5
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.7e-38 164.9 134 54.5
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 6.2e-25 119.8 145 45.5
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 1.4e-24 118.6 87 62.1
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 4.4e-23 113.6 139 46.0
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 2.9e-22 110.9 103 49.5
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 2.3e-19 101.3 135 47.4
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 6.6e-19 99.8 412 26.0
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 1.9e-18 98.2 371 25.1
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 8.1e-17 92.8 75 64.0
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 1.8e-16 91.7 414 25.4
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 1.1e-13 82.4 121 43.8
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.7e-11 75.1 48 70.8


User provided reference genes

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