Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 2.4e-98 362.1 174 100.0
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 1.8e-69 266.2 176 76.7
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 5.2e-40 168.3 148 58.1
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 4.4e-39 165.2 142 54.9
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 4.8e-38 161.8 120 65.0
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 4.8e-38 161.8 121 62.0
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 2.4e-37 159.5 171 50.3
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 3.1e-37 159.1 121 64.5
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 3.1e-37 159.1 121 64.5
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.1e-37 159.1 107 67.3
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 5.3e-37 158.3 121 58.7
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 5.3e-37 158.3 120 60.0
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 5.3e-37 158.3 120 64.2
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 9.1e-37 157.5 108 61.1
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 9.1e-37 157.5 121 60.3
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 1.2e-36 157.1 146 58.2
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 1.2e-36 157.1 146 58.2
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 1.2e-36 157.1 120 63.3
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 1.6e-36 156.8 146 58.2
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 1.6e-36 156.8 120 64.2
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.6e-36 156.8 120 62.5
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 1.6e-36 156.8 120 63.3
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.6e-36 156.8 147 53.1
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 1.6e-36 156.8 155 51.6
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 2.0e-36 156.4 120 60.0
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 2.7e-36 156.0 120 64.2
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.7e-36 156.0 179 47.5
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 2.7e-36 156.0 130 56.2
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 3.5e-36 155.6 112 60.7
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 3.5e-36 155.6 112 62.5
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 3.5e-36 155.6 111 63.1
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 4.5e-36 155.2 122 59.0
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 4.5e-36 155.2 162 49.4
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 4.5e-36 155.2 120 60.0
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 4.5e-36 155.2 121 58.7
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 5.9e-36 154.8 111 61.3
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 7.7e-36 154.5 120 58.3
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 7.7e-36 154.5 120 60.0
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 7.7e-36 154.5 119 60.5
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 7.7e-36 154.5 136 55.1
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 1.0e-35 154.1 121 59.5
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 1.3e-35 153.7 121 57.0
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.7e-35 153.3 179 48.0
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.2e-35 152.9 119 57.1
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.2e-35 152.9 118 60.2
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 2.9e-35 152.5 171 48.5
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 5.0e-35 151.8 118 59.3
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 5.0e-35 151.8 122 59.0
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 6.5e-35 151.4 109 61.5
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 8.5e-35 151.0 120 57.5
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 8.5e-35 151.0 120 57.5
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 8.5e-35 151.0 162 51.2
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 8.5e-35 151.0 167 47.9
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 1.1e-34 150.6 121 58.7
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.1e-34 150.6 143 52.4
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 1.1e-34 150.6 121 57.9
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 1.1e-34 150.6 120 56.7
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.9e-34 149.8 108 62.0
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 1.9e-34 149.8 172 44.2
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.9e-34 149.8 120 57.5
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.9e-34 149.8 151 52.3
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.5e-34 149.4 117 58.1
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.5e-34 149.4 117 58.1
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 3.2e-34 149.1 121 57.0
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 3.2e-34 149.1 155 49.7
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 3.2e-34 149.1 108 63.0
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 3.2e-34 149.1 119 54.6
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 4.2e-34 148.7 120 55.0
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 4.2e-34 148.7 109 59.6
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 5.5e-34 148.3 107 60.7
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 5.5e-34 148.3 107 60.7
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 5.5e-34 148.3 117 59.0
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 7.2e-34 147.9 121 58.7
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 7.2e-34 147.9 106 62.3
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 7.2e-34 147.9 117 58.1
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 9.4e-34 147.5 108 60.2
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 1.2e-33 147.1 166 47.0
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 1.2e-33 147.1 173 46.2
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.6e-33 146.7 120 56.7
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 1.6e-33 146.7 121 54.5
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 6.1e-33 144.8 151 48.3
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.0e-32 144.1 151 48.3
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.0e-32 144.1 120 56.7
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 1.4e-32 143.7 108 60.2
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 1.8e-32 143.3 106 59.4
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 2.3e-32 142.9 106 59.4
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 3.0e-32 142.5 121 52.9
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 4.0e-32 142.1 143 51.7
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 4.0e-32 142.1 108 59.3
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 6.8e-32 141.4 108 58.3
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.5e-31 140.2 173 43.9
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.5e-31 140.2 107 59.8
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 2.0e-31 139.8 154 50.0
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 7.5e-31 137.9 143 50.3
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 7.5e-31 137.9 114 56.1
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 9.1e-29 131.0 103 58.3
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.6e-28 130.2 176 41.5
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.0e-28 129.8 130 46.9
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 7.7e-28 127.9 147 44.2
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.0e-27 127.5 105 54.3
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.0e-27 127.5 106 54.7
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 1.3e-27 127.1 113 52.2
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.7e-27 126.7 110 52.7
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 2.9e-27 125.9 152 46.7
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 5.0e-27 125.2 150 40.7
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 6.5e-27 124.8 108 50.9
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 8.6e-27 124.4 110 50.9
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 8.6e-27 124.4 110 50.9
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 8.6e-27 124.4 106 53.8
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 1.1e-26 124.0 108 50.9
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.5e-26 123.6 95 55.8
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 1.5e-26 123.6 110 50.0
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 2.5e-26 122.9 141 41.8
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 3.3e-26 122.5 108 52.8
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.3e-26 122.5 110 51.8
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 5.5e-26 121.7 105 54.3
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.5e-26 121.7 105 54.3
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 5.5e-26 121.7 107 50.5
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 5.5e-26 121.7 106 51.9
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 5.5e-26 121.7 110 49.1
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 7.2e-26 121.3 108 50.0
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 7.2e-26 121.3 157 42.7
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 9.5e-26 120.9 105 53.3
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.2e-25 120.6 155 39.4
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 1.2e-25 120.6 110 49.1
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 1.6e-25 120.2 171 39.8
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.1e-25 119.8 108 50.9
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 2.8e-25 119.4 141 40.4
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.8e-25 119.4 152 42.8
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.7e-25 118.6 108 50.9
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.1e-25 118.2 105 50.5
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 8.0e-25 117.9 162 39.5
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 8.0e-25 117.9 146 41.8
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 1.0e-24 117.5 175 36.0
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.0e-24 117.5 108 50.0
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.0e-24 117.5 105 50.5
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 1.0e-24 117.5 118 50.0
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.0e-24 117.5 118 50.0
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 1.4e-24 117.1 111 47.7
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.8e-24 116.7 174 37.4
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.3e-24 116.3 124 45.2
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.3e-24 116.3 108 50.9
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.2e-23 114.0 108 46.3
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 5.7e-23 111.7 107 47.7
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 7.5e-23 111.3 100 52.0
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.3e-22 110.5 130 45.4
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 1.3e-22 110.5 103 48.5
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 3.7e-22 109.0 131 43.5
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.4e-21 106.3 110 40.9
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.4e-21 106.3 97 51.5
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 3.1e-21 105.9 139 38.8
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 5.4e-21 105.1 125 40.8
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 7.0e-21 104.8 150 40.7
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 7.0e-21 104.8 110 43.6
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 5.0e-19 98.6 105 47.6
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.5e-18 97.1 118 40.7
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.5e-18 97.1 118 40.7
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.1e-17 93.2 60 65.0
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 2.1e-17 93.2 60 66.7
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 1.0e-16 90.9 93 46.2
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 1.0e-16 90.9 110 40.9
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 4.4e-15 85.5 242 27.3
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 1.3e-14 84.0 59 59.3
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 2.2e-14 83.2 59 61.0
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 9.2e-13 77.8 62 51.6
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 2.0e-12 76.6 265 24.9
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 8.6e-11 71.2 99 40.4
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.5e-10 70.5 78 43.6
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 4.3e-10 68.9 177 33.3
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 1.1e-08 64.3 49 63.3
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 6.8e-08 61.6 104 34.6
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 3.7e-06 55.8 56 50.0


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