Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 1.7e-138 496.1 266 100.0
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 1.6e-109 399.8 273 79.9
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 1.2e-96 357.1 198 88.9
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 3.9e-95 352.1 219 81.7
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 5.0e-95 351.7 213 82.6
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 6.6e-95 351.3 198 87.9
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 1.1e-94 350.5 199 87.4
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 1.1e-94 350.5 199 87.4
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.1e-94 350.5 210 84.8
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 3.3e-94 349.0 198 86.9
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 4.3e-94 348.6 209 84.7
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 4.3e-94 348.6 209 84.7
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 5.6e-94 348.2 199 86.9
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 5.6e-94 348.2 201 85.6
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 5.6e-94 348.2 199 86.9
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 5.6e-94 348.2 199 86.9
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 9.5e-94 347.4 245 74.3
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 1.2e-93 347.1 210 82.9
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 1.6e-93 346.7 199 84.9
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 1.6e-93 346.7 218 81.2
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 1.6e-93 346.7 199 86.4
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 1.6e-93 346.7 211 81.5
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 2.1e-93 346.3 209 84.2
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 2.1e-93 346.3 199 86.4
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 2.1e-93 346.3 199 86.9
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 3.6e-93 345.5 209 82.8
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 3.6e-93 345.5 210 82.4
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 6.2e-93 344.7 237 76.8
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 8.0e-93 344.4 199 86.4
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 8.0e-93 344.4 199 85.4
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 1.1e-92 344.0 199 84.4
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 1.4e-92 343.6 206 82.5
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 1.4e-92 343.6 224 78.1
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.4e-92 343.6 211 81.5
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 1.4e-92 343.6 235 75.3
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 1.4e-92 343.6 208 83.2
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 1.8e-92 343.2 224 79.5
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 1.8e-92 343.2 203 84.7
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 2.3e-92 342.8 208 82.7
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 3.1e-92 342.4 242 75.6
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 4.0e-92 342.0 209 82.8
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 4.0e-92 342.0 218 80.3
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 5.2e-92 341.7 242 75.2
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 5.2e-92 341.7 245 73.5
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 6.8e-92 341.3 208 83.7
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 6.8e-92 341.3 201 84.6
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 6.8e-92 341.3 198 86.9
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 8.9e-92 340.9 225 78.7
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 8.9e-92 340.9 203 83.3
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 8.9e-92 340.9 217 80.6
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 8.9e-92 340.9 235 75.7
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.2e-91 340.5 203 84.2
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 1.2e-91 340.5 218 79.8
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 1.2e-91 340.5 219 80.4
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 1.5e-91 340.1 236 74.6
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 1.5e-91 340.1 212 81.1
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 1.5e-91 340.1 198 85.4
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 1.5e-91 340.1 203 83.3
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 2.0e-91 339.7 200 83.5
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 2.0e-91 339.7 235 75.3
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 2.0e-91 339.7 210 81.4
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 2.0e-91 339.7 220 78.2
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 2.6e-91 339.3 208 80.3
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 3.4e-91 339.0 203 83.7
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 4.4e-91 338.6 223 77.6
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 9.8e-91 337.4 228 77.6
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 9.8e-91 337.4 221 78.3
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 9.8e-91 337.4 211 79.6
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 9.8e-91 337.4 198 85.4
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 1.3e-90 337.0 232 74.6
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 2.2e-90 336.3 220 77.3
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 2.9e-90 335.9 198 85.4
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 2.9e-90 335.9 246 72.0
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 2.9e-90 335.9 218 77.1
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 3.7e-90 335.5 226 76.1
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 3.7e-90 335.5 226 76.1
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 4.9e-90 335.1 198 84.8
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 4.9e-90 335.1 211 80.6
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 6.4e-90 334.7 198 85.4
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 8.3e-90 334.3 224 76.3
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 1.4e-89 333.6 211 80.1
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 3.2e-89 332.4 217 75.1
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 7.0e-89 331.3 198 83.8
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 7.0e-89 331.3 206 80.1
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 9.2e-89 330.9 199 83.9
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 1.2e-88 330.5 209 79.9
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 2.0e-88 329.7 205 80.0
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 6.0e-88 328.2 201 79.6
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 1.0e-87 327.4 208 79.8
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 1.7e-87 326.6 203 79.8
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 2.3e-87 326.2 215 77.2
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 3.0e-87 325.9 222 74.3
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 3.0e-87 325.9 222 74.8
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 3.0e-87 325.9 210 77.6
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 3.0e-87 325.9 198 80.3
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.9e-87 325.5 189 84.1
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 3.9e-87 325.5 228 72.4
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 1.1e-86 323.9 222 74.8
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 1.1e-86 323.9 222 74.3
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 1.5e-86 323.6 222 73.9
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 1.5e-86 323.6 240 70.0
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 1.5e-86 323.6 205 80.5
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 7.3e-86 321.2 222 73.4
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 9.5e-86 320.9 226 73.9
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 2.8e-85 319.3 216 75.0
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 2.8e-85 319.3 196 82.1
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.4e-84 317.0 201 79.1
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 1.8e-84 316.6 196 81.1
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 5.2e-84 315.1 201 78.6
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 6.8e-84 314.7 199 78.9
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 6.8e-84 314.7 199 78.9
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 9.9e-83 310.8 224 71.4
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 1.7e-82 310.1 204 78.9
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 2.7e-80 302.8 236 66.5
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 1.2e-77 293.9 199 75.4
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.6e-77 293.5 207 74.9
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 2.1e-77 293.1 203 72.9
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 1.4e-76 290.4 166 86.1
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 3.1e-76 289.3 206 73.8
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 3.1e-76 289.3 209 71.3
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 4.0e-76 288.9 229 65.5
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 1.5e-75 287.0 198 74.2
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 5.8e-75 285.0 229 63.8
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 1.3e-74 283.9 231 67.5
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 3.2e-73 279.3 198 72.2
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 4.6e-72 275.4 157 85.4
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 5.1e-71 271.9 206 67.5
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 6.2e-69 265.0 153 83.7
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 2.4e-68 263.1 202 68.3
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 4.4e-67 258.8 191 69.6
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 5.8e-67 258.5 161 80.1
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 1.3e-66 257.3 189 71.4
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 4.9e-66 255.4 197 68.5
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.2e-64 250.8 166 73.5
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.5e-64 249.2 160 78.1
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.7e-63 246.9 147 82.3
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 1.7e-63 246.9 149 78.5
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 2.3e-63 246.5 157 79.0
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 3.0e-63 246.1 220 60.5
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 5.1e-63 245.4 154 77.3
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 4.8e-61 238.8 211 62.6
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 4.5e-59 232.3 147 78.2
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 6.4e-58 228.4 195 64.1
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 1.1e-57 227.6 157 73.2
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 1.8e-55 220.3 167 67.7
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 1.1e-54 217.6 165 70.3
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 1.6e-53 213.8 199 59.8
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 6.4e-50 201.8 196 48.0
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 6.9e-44 181.8 107 83.2
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.4e-41 174.1 106 80.2
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 5.5e-41 172.2 118 71.2
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 3.7e-37 159.5 343 35.9
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 2.4e-36 156.8 188 43.1
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 6.9e-36 155.2 159 54.7
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 4.5e-35 152.5 209 40.7
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 2.3e-31 140.2 225 37.8
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 8.2e-29 131.7 84 77.4
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 9.1e-20 101.7 69 71.0
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 4.5e-19 99.4 69 69.6
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 2.1e-16 90.5 98 51.0
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 1.8e-15 87.4 59 72.9
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.2e-11 74.7 43 79.1
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.5e-09 67.8 41 75.6
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.5e-09 67.8 52 65.4
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 4.2e-09 66.2 34 88.2
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 5.5e-09 65.9 117 36.8
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 9.4e-09 65.1 37 81.1
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 4.0e-07 59.7 34 76.5
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 6.7e-07 58.9 37 75.7
CSS0040239 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 6.7e-07 58.9 36 75.0


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