Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 1.9e-96 355.9 188 100.0
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 1.5e-85 319.7 191 86.9
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 4.7e-79 298.1 188 86.7
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 7.0e-75 284.3 167 80.8
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 6.6e-57 224.6 154 68.8
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 1.9e-56 223.0 183 72.7
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 2.5e-56 222.6 114 90.4
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 8.0e-55 217.6 114 88.6
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 2.4e-51 206.1 149 64.4
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 3.2e-51 205.7 185 61.1
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 3.2e-51 205.7 155 63.9
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 1.2e-50 203.8 150 64.0
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 2.7e-50 202.6 153 62.7
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 4.6e-50 201.8 149 73.2
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 5.9e-50 201.4 149 67.8
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 5.9e-50 201.4 157 69.4
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 7.8e-50 201.1 149 71.1
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 1.0e-49 200.7 149 63.1
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 1.0e-49 200.7 149 62.4
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 1.3e-49 200.3 154 62.3
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 1.3e-49 200.3 181 56.9
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 2.3e-49 199.5 149 65.1
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 2.3e-49 199.5 188 55.3
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 3.9e-49 198.7 163 65.6
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 3.9e-49 198.7 149 61.7
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 5.0e-49 198.4 191 60.2
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 6.6e-49 198.0 188 53.2
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 6.6e-49 198.0 181 59.1
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 1.1e-48 197.2 149 61.1
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 1.1e-48 197.2 160 70.0
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 1.5e-48 196.8 185 55.1
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 1.9e-48 196.4 178 53.9
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 1.9e-48 196.4 161 64.6
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 1.9e-48 196.4 188 57.4
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 1.9e-48 196.4 163 65.0
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 1.9e-48 196.4 149 62.4
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 2.5e-48 196.1 150 60.7
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 2.5e-48 196.1 150 60.0
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 3.3e-48 195.7 150 60.0
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 4.3e-48 195.3 168 54.8
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 5.6e-48 194.9 186 54.3
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 7.3e-48 194.5 157 70.7
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 9.5e-48 194.1 150 69.3
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 9.5e-48 194.1 157 60.5
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 1.2e-47 193.7 115 76.5
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 1.2e-47 193.7 163 60.1
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.2e-47 193.7 154 60.4
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 1.2e-47 193.7 154 60.4
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 1.6e-47 193.4 113 76.1
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 1.6e-47 193.4 157 62.4
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 2.1e-47 193.0 165 64.8
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 2.8e-47 192.6 113 77.9
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 2.8e-47 192.6 150 60.7
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.8e-47 192.6 150 60.7
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 2.8e-47 192.6 191 53.4
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 2.8e-47 192.6 149 61.7
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 2.8e-47 192.6 149 63.8
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 3.6e-47 192.2 168 54.2
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 3.6e-47 192.2 113 75.2
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 3.6e-47 192.2 113 75.2
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 3.6e-47 192.2 149 61.1
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 3.6e-47 192.2 149 61.1
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 4.7e-47 191.8 185 52.4
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 4.7e-47 191.8 150 60.0
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 6.2e-47 191.4 113 75.2
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 6.2e-47 191.4 179 54.2
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 8.0e-47 191.0 154 59.7
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 8.0e-47 191.0 149 67.1
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 1.1e-46 190.7 148 59.5
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 1.1e-46 190.7 114 72.8
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.1e-46 190.7 148 69.6
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 1.1e-46 190.7 185 51.9
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 1.1e-46 190.7 114 75.4
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 1.1e-46 190.7 188 52.7
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 2.3e-46 189.5 171 54.4
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 3.1e-46 189.1 113 75.2
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 8.9e-46 187.6 113 74.3
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 8.9e-46 187.6 171 54.4
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 1.5e-45 186.8 169 53.3
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 1.5e-45 186.8 115 72.2
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 1.5e-45 186.8 202 49.5
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 2.0e-45 186.4 174 54.0
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 2.6e-45 186.0 113 74.3
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 4.4e-45 185.3 113 72.6
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 1.3e-44 183.7 191 55.5
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 1.3e-44 183.7 187 51.3
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 1.7e-44 183.3 145 60.0
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 2.2e-44 183.0 114 70.2
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 2.9e-44 182.6 113 70.8
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 3.7e-44 182.2 111 73.0
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 3.7e-44 182.2 111 73.0
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 3.7e-44 182.2 111 73.0
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 3.7e-44 182.2 111 73.0
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 3.7e-44 182.2 111 73.0
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 3.7e-44 182.2 155 56.8
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 4.9e-44 181.8 111 72.1
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 4.9e-44 181.8 114 71.1
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.1e-43 180.6 145 55.9
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.4e-43 180.3 179 49.7
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 4.1e-43 178.7 179 55.9
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 5.4e-43 178.3 111 70.3
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 9.2e-43 177.6 116 69.8
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 1.6e-42 176.8 106 73.6
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 1.6e-42 176.8 109 70.6
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 2.0e-42 176.4 149 58.4
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.3e-41 173.7 116 68.1
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 8.6e-41 171.0 158 60.1
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 5.6e-40 168.3 106 69.8
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 1.2e-39 167.2 93 77.4
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 1.1e-38 164.1 108 69.4
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 2.3e-38 162.9 108 66.7
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 3.1e-38 162.5 138 68.1
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 3.1e-38 162.5 114 65.8
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 1.5e-37 160.2 108 68.5
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 3.4e-37 159.1 118 61.9
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 4.4e-37 158.7 141 52.5
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 5.8e-37 158.3 160 48.8
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 9.9e-37 157.5 108 63.9
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 1.9e-35 153.3 158 54.4
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 1.6e-34 150.2 126 64.3
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 2.1e-34 149.8 117 58.1
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 1.1e-32 144.1 82 78.0
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 2.7e-26 122.9 108 50.0
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 4.6e-26 122.1 116 46.6
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 3.3e-24 115.9 98 65.3
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 6.2e-23 111.7 112 47.3
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 6.4e-12 75.1 92 38.0
Actinidia36920 Actinidia chinensis HOM05D006377 ORTHO05D057244 6.2e-07 58.5 123 33.3


User provided reference genes

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