Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 8.9e-99 363.6 185 100.0
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 9.9e-90 333.6 185 92.4
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 8.1e-76 287.3 191 81.2
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 2.5e-53 212.6 197 60.9
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 3.3e-53 212.2 142 77.5
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 7.4e-53 211.1 201 61.2
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 1.3e-52 210.3 183 62.3
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 1.3e-52 210.3 142 76.8
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 1.3e-52 210.3 203 60.1
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 1.6e-52 209.9 181 66.3
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 2.1e-52 209.5 181 63.5
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 2.1e-52 209.5 124 79.8
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 2.1e-52 209.5 120 85.0
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 2.8e-52 209.1 181 63.0
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 2.8e-52 209.1 185 63.8
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 2.8e-52 209.1 186 62.9
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 2.8e-52 209.1 181 63.0
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 2.8e-52 209.1 195 63.1
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 2.8e-52 209.1 124 79.8
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 3.7e-52 208.8 187 63.6
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 4.8e-52 208.4 195 61.0
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 4.8e-52 208.4 193 60.1
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 6.3e-52 208.0 185 63.2
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 6.3e-52 208.0 186 61.8
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 6.3e-52 208.0 186 61.8
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 6.3e-52 208.0 128 79.7
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 6.3e-52 208.0 186 64.0
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 6.3e-52 208.0 187 61.5
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 6.3e-52 208.0 120 84.2
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 8.2e-52 207.6 188 62.2
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 8.2e-52 207.6 201 59.2
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 8.2e-52 207.6 186 62.4
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 1.1e-51 207.2 188 62.8
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 1.1e-51 207.2 196 59.2
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 1.1e-51 207.2 199 62.3
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 1.1e-51 207.2 206 60.7
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 1.4e-51 206.8 195 60.0
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 1.4e-51 206.8 196 60.7
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 1.4e-51 206.8 183 63.9
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 1.4e-51 206.8 202 61.9
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 1.8e-51 206.5 186 63.4
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 1.8e-51 206.5 200 59.5
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 2.4e-51 206.1 203 59.1
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 2.4e-51 206.1 201 59.7
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 3.1e-51 205.7 196 60.7
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 3.1e-51 205.7 192 59.9
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 3.1e-51 205.7 196 61.7
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 3.1e-51 205.7 186 63.4
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 3.1e-51 205.7 200 61.5
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 4.1e-51 205.3 190 59.5
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 5.3e-51 204.9 172 66.9
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 5.3e-51 204.9 172 66.9
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 5.3e-51 204.9 172 66.9
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 6.9e-51 204.5 192 59.9
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 6.9e-51 204.5 188 61.7
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 6.9e-51 204.5 188 61.7
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 6.9e-51 204.5 192 60.4
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 6.9e-51 204.5 195 60.5
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 6.9e-51 204.5 202 59.4
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 9.0e-51 204.1 112 85.7
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 1.5e-50 203.4 168 66.1
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 1.5e-50 203.4 202 58.9
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 2.0e-50 203.0 160 67.5
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 2.0e-50 203.0 196 59.2
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 2.0e-50 203.0 200 61.5
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 2.0e-50 203.0 199 60.8
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 2.6e-50 202.6 114 84.2
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 2.6e-50 202.6 183 61.2
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 2.6e-50 202.6 187 61.0
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 2.6e-50 202.6 166 65.1
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 3.4e-50 202.2 186 60.8
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 3.4e-50 202.2 182 63.2
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 3.4e-50 202.2 200 60.0
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 4.5e-50 201.8 200 59.0
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 4.5e-50 201.8 117 80.3
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 4.5e-50 201.8 166 66.3
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 4.5e-50 201.8 197 57.9
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 5.9e-50 201.4 170 65.3
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 5.9e-50 201.4 112 83.9
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 5.9e-50 201.4 190 60.5
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 7.6e-50 201.1 182 64.3
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 7.6e-50 201.1 200 60.5
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 1.0e-49 200.7 193 58.0
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 1.3e-49 200.3 185 60.5
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 1.3e-49 200.3 107 86.0
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.3e-49 200.3 193 60.1
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 1.3e-49 200.3 112 83.9
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 1.3e-49 200.3 112 83.9
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 1.3e-49 200.3 104 91.3
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.7e-49 199.9 193 59.6
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 1.7e-49 199.9 193 59.6
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 1.7e-49 199.9 200 60.0
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 2.2e-49 199.5 187 57.8
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 2.2e-49 199.5 115 84.3
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 2.9e-49 199.1 198 61.6
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 2.9e-49 199.1 168 66.7
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 3.8e-49 198.7 111 84.7
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 3.8e-49 198.7 148 68.9
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 5.0e-49 198.4 104 89.4
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 5.0e-49 198.4 189 59.3
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 6.5e-49 198.0 181 62.4
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 8.5e-49 197.6 104 89.4
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 8.5e-49 197.6 186 59.1
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 1.1e-48 197.2 184 64.1
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 1.9e-48 196.4 104 88.5
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.9e-48 196.4 194 59.8
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 2.5e-48 196.1 183 60.1
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 2.5e-48 196.1 193 57.5
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.5e-48 196.1 193 57.5
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 3.2e-48 195.7 199 58.3
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 3.2e-48 195.7 199 59.8
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 4.2e-48 195.3 189 58.2
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 5.5e-48 194.9 184 58.2
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 5.5e-48 194.9 195 57.9
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 9.3e-48 194.1 204 58.3
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 9.3e-48 194.1 212 56.1
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 9.3e-48 194.1 202 55.9
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 9.3e-48 194.1 108 84.3
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 9.3e-48 194.1 188 61.2
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.2e-47 193.7 204 57.4
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.2e-47 193.7 195 57.9
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.2e-47 193.7 197 57.9
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 2.7e-47 192.6 196 57.1
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 2.7e-47 192.6 139 71.9
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 2.7e-47 192.6 196 59.2
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 2.7e-47 192.6 127 73.2
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 3.6e-47 192.2 199 58.3
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 4.6e-47 191.8 206 56.3
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 7.9e-47 191.0 185 60.0
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 2.3e-46 189.5 104 84.6
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 2.3e-46 189.5 192 57.3
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 3.9e-46 188.7 112 80.4
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 5.7e-45 184.9 201 55.2
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 1.8e-43 179.9 174 56.3
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 1.8e-43 179.9 103 84.5
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 9.1e-43 177.6 100 81.0
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 2.2e-41 172.9 131 67.9
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 9.4e-40 167.5 165 57.6
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.6e-39 166.8 112 70.5
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.4e-38 163.7 169 58.6
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 3.9e-38 162.2 183 51.9
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 8.8e-38 161.0 184 53.3
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 1.3e-36 157.1 108 68.5
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 1.3e-36 157.1 101 74.3
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 1.1e-32 144.1 105 64.8
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 1.6e-31 140.2 99 68.7
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 1.8e-27 126.7 145 51.0
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 1.6e-23 113.6 100 53.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 7.5e-21 104.8 100 50.0


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