Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G0932 Vigna mungo HOM05D002077 ORTHO05D000818 1.9e-65 252.3 123 100.0
Phvul.008G073500 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 9.0e-47 190.3 121 75.2
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 7.6e-46 187.2 132 75.8
Phvul.008G073600 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 6.9e-39 164.1 108 67.6
Glyma.02G057300 Glycine max HOM05D002077 ORTHO05D000818 2.4e-31 139.0 103 66.0
Glyma.01G100400 Glycine max HOM05D002077 ORTHO05D000818 1.5e-30 136.3 103 65.0
Glyma.15G192600 Glycine max HOM05D002077 ORTHO05D000818 1.6e-27 126.3 92 64.1
Medtr1g029330 Medicago truncatula HOM05D002077 ORTHO05D000818 7.4e-25 117.5 108 54.6
Medtr7g074430 Medicago truncatula HOM05D002077 ORTHO05D000818 9.7e-25 117.1 110 55.5
Glyma.16G140400 Glycine max HOM05D002077 ORTHO05D000818 6.9e-23 110.9 78 65.4
Medtr7g074410 Medicago truncatula HOM05D002077 ORTHO05D000818 1.5e-22 109.8 110 50.9
TPR.G14717 Trifolium pratense HOM05D002077 ORTHO05D000818 1.3e-21 106.7 120 47.5
Medtr7g075970 Medicago truncatula HOM05D002077 ORTHO05D000818 2.9e-21 105.5 109 48.6
Psat3g113640 Pisum sativum HOM05D002077 ORTHO05D000818 7.2e-20 100.9 120 43.3
arahy.Tifrunner.gnm1.ann1.Z3M8QU Arachis hypogaea HOM05D002077 ORTHO05D000818 2.1e-19 99.4 118 41.5
Psat3g113600 Pisum sativum HOM05D002077 ORTHO05D000818 3.6e-19 98.6 120 42.5
arahy.Tifrunner.gnm1.ann1.UUWI9C Arachis hypogaea HOM05D002077 ORTHO05D000818 4.6e-19 98.2 120 40.0
arahy.Tifrunner.gnm1.ann1.BD57PC Arachis hypogaea HOM05D002077 ORTHO05D000818 7.9e-19 97.4 122 39.3
arahy.Tifrunner.gnm1.ann1.R7U9VL Arachis hypogaea HOM05D002077 ORTHO05D000818 1.8e-18 96.3 118 41.5
arahy.Tifrunner.gnm1.ann1.HTS5S3 Arachis hypogaea HOM05D002077 ORTHO05D000818 5.1e-18 94.7 120 38.3
Lj1g0005001 Lotus japonicus HOM05D002077 ORTHO05D000818 6.7e-18 94.4 120 41.7
arahy.Tifrunner.gnm1.ann1.DJ3X7X Arachis hypogaea HOM05D002077 ORTHO05D000818 2.5e-17 92.4 122 39.3
arahy.Tifrunner.gnm1.ann1.BCS63D Arachis hypogaea HOM05D002077 ORTHO05D000818 9.7e-17 90.5 122 39.3
QL09p041417 Quercus lobata HOM05D002077 ORTHO05D000818 1.1e-15 87.0 109 41.3
arahy.Tifrunner.gnm1.ann1.33M2C5 Arachis hypogaea HOM05D002077 ORTHO05D000818 4.1e-15 85.1 116 39.7
QL12p002854 Quercus lobata HOM05D002077 ORTHO05D000818 1.2e-14 83.6 124 40.3
THA.LOC104806991 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 2.9e-13 79.0 102 43.1
CSS0014052 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 3.8e-13 78.6 115 40.0
Ciclev10005501m.g Citrus clementina HOM05D002077 ORTHO05D000818 5.0e-13 78.2 124 37.9
Aa31LG4G17390 Aethionema arabicum HOM05D002077 ORTHO05D000818 2.5e-12 75.9 121 38.8
arahy.Tifrunner.gnm1.ann1.7PN750 Arachis hypogaea HOM05D002077 ORTHO05D000818 7.2e-12 74.3 118 32.2
Eucgr.A02798 Eucalyptus grandis HOM05D002077 ORTHO05D000818 7.2e-12 74.3 104 41.3
Potri.015G139700 Populus trichocarpa HOM05D002077 ORTHO05D000818 7.2e-12 74.3 104 42.3
FvH4_3g32353 Fragaria vesca HOM05D002077 ORTHO05D000818 9.4e-12 73.9 102 35.3
CARHR157690 Cardamine hirsuta HOM05D002077 ORTHO05D000818 1.2e-11 73.6 104 39.4
COL.COLO4_14296 Corchorus olitorius HOM05D002077 ORTHO05D000818 1.2e-11 73.6 104 41.3
Dinv35206 Davidia involucrata HOM05D002077 ORTHO05D000818 1.6e-11 73.2 124 37.1
THA.LOC104824394 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 1.6e-11 73.2 104 40.4
Manes.06G146400 Manihot esculenta HOM05D002077 ORTHO05D000818 2.1e-11 72.8 104 41.3
AL5G28390 Arabidopsis lyrata HOM05D002077 ORTHO05D000818 2.7e-11 72.4 104 39.4
Thhalv10010519m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 2.7e-11 72.4 104 39.4
GSVIVG01010544001 Vitis vinifera HOM05D002077 ORTHO05D000818 2.7e-11 72.4 124 36.3
Ca_10779_v3 Cicer arietinum L. HOM05D002077 ORTHO05D000818 3.6e-11 72.0 121 37.2
Manes.02G024600 Manihot esculenta HOM05D002077 ORTHO05D000818 3.6e-11 72.0 106 38.7
BcaC07g39363 Brassica carinata HOM05D002077 ORTHO05D000818 4.7e-11 71.6 103 38.8
CiPaw.03G105400 Carya illinoinensis HOM05D002077 ORTHO05D000818 4.7e-11 71.6 107 39.3
Lalb_Chr06g0161071 Lupinus albus HOM05D002077 ORTHO05D000818 4.7e-11 71.6 124 37.1
Medtr1g100697 Medicago truncatula HOM05D002077 ORTHO05D000818 4.7e-11 71.6 121 37.2
Medtr1g100707 Medicago truncatula HOM05D002077 ORTHO05D000818 4.7e-11 71.6 121 37.2
BcaC09g49912 Brassica carinata HOM05D002077 ORTHO05D000818 6.1e-11 71.2 104 37.5
A01p25170 Brassica napus HOM05D002077 ORTHO05D000818 6.1e-11 71.2 104 37.5
BolC1t03074H Brassica oleracea HOM05D002077 ORTHO05D000818 6.1e-11 71.2 104 37.5
BraA01t02425Z Brassica rapa HOM05D002077 ORTHO05D000818 6.1e-11 71.2 104 37.5
Cpa.g.sc107.40 Carica papaya HOM05D002077 ORTHO05D000818 6.1e-11 71.2 117 39.3
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 6.1e-11 71.2 104 40.4
VMungo0720G0161 Vigna mungo HOM05D002077 ORTHO05D000818 6.1e-11 71.2 125 36.8
Atru.chr1.476 Acer truncatum HOM05D002077 ORTHO05D000818 7.9e-11 70.9 124 37.1
AT3G48880 Arabidopsis thaliana HOM05D002077 ORTHO05D000818 7.9e-11 70.9 104 38.5
arahy.Tifrunner.gnm1.ann1.6H6H67 Arachis hypogaea HOM05D002077 ORTHO05D000818 7.9e-11 70.9 124 36.3
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea HOM05D002077 ORTHO05D000818 7.9e-11 70.9 124 36.3
BcaB05g22980 Brassica carinata HOM05D002077 ORTHO05D000818 7.9e-11 70.9 104 37.5
Carub.0005s1505 Capsella rubella HOM05D002077 ORTHO05D000818 7.9e-11 70.9 104 38.5
TPR.G14327 Trifolium pratense HOM05D002077 ORTHO05D000818 7.9e-11 70.9 124 35.5
Glyma.20G157500 Glycine max HOM05D002077 ORTHO05D000818 1.0e-10 70.5 124 37.1
Phvul.007G069000 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 1.0e-10 70.5 124 37.1
Potri.012G137700 Populus trichocarpa HOM05D002077 ORTHO05D000818 1.0e-10 70.5 104 40.4
QL09p014520 Quercus lobata HOM05D002077 ORTHO05D000818 1.0e-10 70.5 104 38.5
Sabra15G0150400 Salix brachista HOM05D002077 ORTHO05D000818 1.0e-10 70.5 104 41.3
Sp5g13170 Schrenkiella parvula HOM05D002077 ORTHO05D000818 1.0e-10 70.5 104 38.5
TWI14G1216 Tripterygium wilfordii HOM05D002077 ORTHO05D000818 1.0e-10 70.5 124 36.3
HPP92_008435 Vanilla planifolia HOM05D002077 ORTHO05D000818 1.0e-10 70.5 105 32.4
C01p31370 Brassica napus HOM05D002077 ORTHO05D000818 1.4e-10 70.1 104 36.5
Lj5g0027705 Lotus japonicus HOM05D002077 ORTHO05D000818 1.4e-10 70.1 124 35.5
HanXRQChr07g0207061 Helianthus annuus HOM05D002077 ORTHO05D000818 1.8e-10 69.7 107 38.3
Thecc.03G175300 Theobroma cacao HOM05D002077 ORTHO05D000818 1.8e-10 69.7 105 40.0
HPP92_008461 Vanilla planifolia HOM05D002077 ORTHO05D000818 1.8e-10 69.7 105 32.4
Migut.F01126 Erythranthe guttata HOM05D002077 ORTHO05D000818 2.3e-10 69.3 121 34.7
FvH4_7g29350 Fragaria vesca HOM05D002077 ORTHO05D000818 2.3e-10 69.3 104 39.4
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 2.3e-10 69.3 104 39.4
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 2.3e-10 69.3 104 39.4
Gohir.D09G041900 Gossypium hirsutum HOM05D002077 ORTHO05D000818 2.3e-10 69.3 107 38.3
Gorai.006G048100 Gossypium raimondii HOM05D002077 ORTHO05D000818 2.3e-10 69.3 107 38.3
HanXRQChr15g0495591 Helianthus annuus HOM05D002077 ORTHO05D000818 2.3e-10 69.3 121 35.5
C08p23850 Brassica napus HOM05D002077 ORTHO05D000818 3.0e-10 68.9 103 37.9
BolC8t50011H Brassica oleracea HOM05D002077 ORTHO05D000818 3.0e-10 68.9 103 37.9
Dinv28453 Davidia involucrata HOM05D002077 ORTHO05D000818 3.0e-10 68.9 104 38.5
Gohir.A09G041000 Gossypium hirsutum HOM05D002077 ORTHO05D000818 3.0e-10 68.9 107 37.4
Os10g0502900 Oryza sativa ssp. japonica HOM05D002077 ORTHO05D000818 3.0e-10 68.9 106 32.1
Aqoxy5G03957 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 3.9e-10 68.6 104 38.5
CAN.G913.3 Capsicum annuum HOM05D002077 ORTHO05D000818 3.9e-10 68.6 124 35.5
Glyma.10G236900 Glycine max HOM05D002077 ORTHO05D000818 3.9e-10 68.6 104 40.4
THA.LOC104814386 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 3.9e-10 68.6 123 34.1
vmacro06694 Vaccinium macrocarpon HOM05D002077 ORTHO05D000818 3.9e-10 68.6 104 37.5
A06p18870 Brassica napus HOM05D002077 ORTHO05D000818 5.1e-10 68.2 103 36.9
CSS0043009 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 5.1e-10 68.2 87 40.2
Eucgr.A02799 Eucalyptus grandis HOM05D002077 ORTHO05D000818 5.1e-10 68.2 123 35.8
Hma1.2p1_3140F.1_g333050 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 6.7e-10 67.8 125 35.2
Ciclev10021301m.g Citrus clementina HOM05D002077 ORTHO05D000818 8.8e-10 67.4 126 38.9
Nitab4.5_0000716g0180 Nicotiana tabacum HOM05D002077 ORTHO05D000818 8.8e-10 67.4 124 34.7
Nitab4.5_0003365g0050 Nicotiana tabacum HOM05D002077 ORTHO05D000818 8.8e-10 67.4 124 34.7
Oeu021781.1 Olea europaea HOM05D002077 ORTHO05D000818 8.8e-10 67.4 112 35.7
RcHm_v2.0_Chr1g0377111 Rosa chinensis HOM05D002077 ORTHO05D000818 8.8e-10 67.4 107 38.3
SGA_v2.0_scaffold10G05344 Striga asiatica HOM05D002077 ORTHO05D000818 8.8e-10 67.4 121 34.7
Prupe.2G293200 Prunus persica HOM05D002077 ORTHO05D000818 1.1e-09 67.0 124 33.9
Aa31LG11G3080 Aethionema arabicum HOM05D002077 ORTHO05D000818 1.5e-09 66.6 105 39.0
ECA238G3926 Erigeron canadensis HOM05D002077 ORTHO05D000818 1.5e-09 66.6 104 37.5
Lsat_1_v5_gn_2_131821 Lactuca sativa HOM05D002077 ORTHO05D000818 1.5e-09 66.6 104 38.5
SalBow2G3420 Salvia bowleyana HOM05D002077 ORTHO05D000818 1.5e-09 66.6 124 37.9
Cc02_g03120 Coffea canephora HOM05D002077 ORTHO05D000818 2.0e-09 66.2 104 38.5
Actinidia34102 Actinidia chinensis HOM05D002077 ORTHO05D000818 2.6e-09 65.9 124 34.7
DCAR_009358 Daucus carota HOM05D002077 ORTHO05D000818 3.3e-09 65.5 107 35.5
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 4.4e-09 65.1 103 38.8
Zm00001eb044180 Zea mays HOM05D002077 ORTHO05D000818 4.4e-09 65.1 106 31.1
Duzib205G0590 Durio zibethinus HOM05D002077 ORTHO05D000818 5.7e-09 64.7 117 33.3
PGSC0003DMG403014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 5.7e-09 64.7 124 34.7
Hma1.2p1_2482F.1_g323020 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 7.4e-09 64.3 107 37.4
Solyc03g025920.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 7.4e-09 64.3 124 34.7
Sopen03g004730 Solanum pennellii HOM05D002077 ORTHO05D000818 7.4e-09 64.3 124 34.7
PGSC0003DMG402014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 7.4e-09 64.3 126 35.7
Sp2g23500 Schrenkiella parvula HOM05D002077 ORTHO05D000818 9.7e-09 63.9 108 37.0
Hund11495 Selenicereus undatus HOM05D002077 ORTHO05D000818 1.3e-08 63.5 115 31.3
Aqoxy3G02725 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 1.7e-08 63.2 104 37.5
Rhsim03G0179600 Rhododendron simsii HOM05D002077 ORTHO05D000818 1.7e-08 63.2 107 36.4
CSS0043143 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 2.2e-08 62.8 127 34.6
Peaxi162Scf00915g00025 Petunia axillaris HOM05D002077 ORTHO05D000818 2.2e-08 62.8 124 33.1
ECA232G3548 Erigeron canadensis HOM05D002077 ORTHO05D000818 2.8e-08 62.4 124 33.1
MD07G1267400 Malus domestica HOM05D002077 ORTHO05D000818 2.8e-08 62.4 113 34.5
Solyc03g025940.3 Solanum lycopersicum HOM05D002077 ORTHO05D000818 4.8e-08 61.6 129 34.1
Lj8A25T67 Lonicera japonica HOM05D002077 ORTHO05D000818 8.2e-08 60.8 104 34.6
THA.LOC104814426 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 8.2e-08 60.8 121 33.9
PGSC0003DMG401014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.1e-07 60.5 124 33.9
Medtr1g051645 Medicago truncatula HOM05D002077 ORTHO05D000818 1.4e-07 60.1 48 56.2
Solyc03g025930.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 1.4e-07 60.1 107 37.4
Sopen03g004750 Solanum pennellii HOM05D002077 ORTHO05D000818 1.4e-07 60.1 107 37.4
PGSC0003DMG400014329 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.4e-07 60.1 127 33.1
MD01G1199600 Malus domestica HOM05D002077 ORTHO05D000818 1.8e-07 59.7 106 31.1
MD06G1077200 Malus domestica HOM05D002077 ORTHO05D000818 2.4e-07 59.3 52 53.8
Sopen03g004760 Solanum pennellii HOM05D002077 ORTHO05D000818 2.4e-07 59.3 129 34.1
PGSC0003DMG400030222 Solanum tuberosum HOM05D002077 ORTHO05D000818 3.1e-07 58.9 124 32.3
C04p53730 Brassica napus HOM05D002077 ORTHO05D000818 4.1e-07 58.5 103 38.8
BcaC02g08493 Brassica carinata HOM05D002077 ORTHO05D000818 1.5e-06 56.6 108 37.0
A04p18450 Brassica napus HOM05D002077 ORTHO05D000818 1.5e-06 56.6 110 38.2
Thhalv10005418m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 3.4e-06 55.5 108 35.2
RcHm_v2.0_Chr1g0377091 Rosa chinensis HOM05D002077 ORTHO05D000818 3.4e-06 55.5 134 33.6
AL6G46110 Arabidopsis lyrata HOM05D002077 ORTHO05D000818 5.9e-06 54.7 110 34.5
Thhalv10016006m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 5.9e-06 54.7 105 36.2
TPR.G14336 Trifolium pratense HOM05D002077 ORTHO05D000818 5.9e-06 54.7 119 30.3
BraA04t17457Z Brassica rapa HOM05D002077 ORTHO05D000818 7.7e-06 54.3 110 38.2
Medtr0013s0100 Medicago truncatula HOM05D002077 ORTHO05D000818 7.7e-06 54.3 123 30.9


User provided reference genes

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