Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 2.8e-143 511.9 259 100.0
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 7.5e-104 380.9 254 74.4
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 1.4e-102 376.7 259 72.6
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 9.2e-102 374.0 266 71.8
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.8e-97 359.8 255 70.2
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 6.8e-97 357.8 255 69.4
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 1.5e-96 356.7 255 69.4
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 3.2e-94 349.0 240 71.7
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 3.3e-91 339.0 240 68.3
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 7.8e-85 317.8 210 75.7
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 2.3e-84 316.2 181 89.5
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.5e-80 303.5 265 57.0
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 2.2e-79 299.7 195 80.0
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 4.2e-78 295.4 263 57.4
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 7.1e-78 294.7 264 56.8
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.1e-77 293.1 266 55.3
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 2.7e-77 292.7 266 55.6
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 7.9e-77 291.2 269 54.6
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 1.8e-76 290.0 269 54.3
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 3.0e-76 289.3 266 51.9
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 8.7e-76 287.7 269 53.9
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 1.5e-75 287.0 267 52.4
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 1.9e-75 286.6 270 51.1
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 2.1e-74 283.1 268 53.4
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 1.4e-73 280.4 275 53.1
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 2.4e-73 279.6 268 51.1
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 1.5e-72 276.9 255 54.1
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.0e-72 276.6 268 51.1
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.3e-71 273.9 260 53.5
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.3e-71 273.9 264 52.7
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 4.9e-71 271.9 266 50.8
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 3.2e-70 269.2 264 54.2
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 3.2e-70 269.2 273 51.3
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 9.3e-70 267.7 271 51.7
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 9.3e-70 267.7 231 56.7
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.6e-69 266.9 294 48.6
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 1.6e-69 266.9 268 50.7
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 6.0e-69 265.0 263 52.1
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 6.0e-69 265.0 230 58.3
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 1.3e-68 263.8 268 53.7
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 1.3e-68 263.8 250 54.0
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 3.0e-68 262.7 265 52.8
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 5.1e-68 261.9 252 52.8
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 5.1e-68 261.9 265 52.8
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 1.5e-67 260.4 268 49.6
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 1.5e-67 260.4 253 49.4
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 2.5e-67 259.6 252 54.0
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 1.3e-66 257.3 258 51.2
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 1.3e-66 257.3 267 49.1
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 1.3e-66 257.3 255 51.0
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 1.6e-66 256.9 267 48.3
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 2.8e-66 256.1 260 53.1
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 6.2e-66 255.0 257 49.8
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 6.2e-66 255.0 251 51.0
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 2.4e-65 253.1 252 52.8
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 2.6e-64 249.6 256 51.6
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 7.6e-64 248.1 269 47.2
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 2.2e-63 246.5 269 46.8
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 3.8e-63 245.7 269 46.5
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 4.9e-63 245.4 282 46.5
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 8.4e-63 244.6 254 47.6
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 1.1e-62 244.2 258 50.0
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 4.2e-62 242.3 233 51.1
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 5.5e-62 241.9 207 57.0
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 5.5e-62 241.9 267 49.8
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 7.1e-62 241.5 258 51.2
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.2e-61 240.7 265 47.2
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.1e-61 240.0 265 44.9
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 2.7e-61 239.6 267 46.4
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 4.6e-61 238.8 233 53.2
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 1.8e-60 236.9 217 57.1
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 1.1e-59 234.2 268 46.3
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 1.9e-59 233.4 273 44.3
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 2.5e-59 233.0 246 50.4
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 4.3e-59 232.3 229 49.8
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 2.8e-58 229.6 219 54.3
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 5.3e-57 225.3 208 54.8
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 3.2e-54 216.1 229 47.2
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 1.2e-53 214.2 269 43.5
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.6e-53 213.8 261 42.1
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 3.6e-53 212.6 191 56.0
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.6e-53 212.2 229 46.3
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 6.1e-53 211.8 282 40.1
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.0e-52 211.1 263 43.0
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.8e-52 210.3 204 50.5
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.1e-51 207.6 256 43.8
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 6.3e-50 201.8 211 49.3
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 2.4e-49 199.9 189 54.0
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 3.1e-49 199.5 183 55.7
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 3.1e-49 199.5 261 41.0
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 3.1e-49 199.5 254 42.1
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 5.9e-48 195.3 220 44.1
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 8.5e-47 191.4 228 44.7
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 1.4e-41 174.1 103 83.5
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 5.9e-40 168.7 170 48.2
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 3.8e-31 139.4 135 52.6
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.2e-13 81.3 85 47.1
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 2.8e-13 80.1 268 27.2
MCO04G533 Micromonas commoda HOM05D007546 ORTHO05D009542 7.8e-08 62.0 243 24.3
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.9e-07 60.1 51 52.9
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.9e-07 60.1 51 52.9


User provided reference genes

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