Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 1.6e-135 486.1 242 100.0
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.5e-85 320.1 242 73.1
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.5e-77 293.5 242 68.6
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 9.6e-77 290.8 245 67.8
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 2.6e-74 282.7 239 66.5
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 1.7e-73 280.0 242 65.3
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 3.8e-73 278.9 239 65.7
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 1.1e-72 277.3 243 65.4
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 3.1e-67 259.2 241 62.2
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 1.5e-66 256.9 181 76.2
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 1.9e-64 250.0 243 60.1
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 2.5e-64 249.6 241 58.1
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 2.5e-64 249.6 244 60.7
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 4.2e-64 248.8 241 58.5
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 5.5e-64 248.4 241 58.1
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 9.3e-64 247.7 243 59.7
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 3.5e-63 245.7 241 58.1
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.8e-62 243.4 241 57.7
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.1e-61 240.7 241 59.8
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.5e-61 240.4 241 57.7
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 7.4e-61 238.0 241 58.5
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 7.4e-61 238.0 241 58.5
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 1.3e-60 237.3 171 73.7
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 2.8e-60 236.1 241 57.3
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.8e-60 236.1 241 58.1
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 6.2e-60 235.0 239 57.7
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 2.4e-59 233.0 240 55.8
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 4.1e-59 232.3 185 66.5
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 5.3e-59 231.9 240 57.5
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 6.9e-59 231.5 182 69.8
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 6.9e-59 231.5 182 69.8
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 6.9e-59 231.5 241 57.3
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 9.0e-59 231.1 240 57.9
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 2.0e-58 229.9 243 57.2
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 8.4e-57 224.6 240 56.7
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 5.5e-56 221.9 240 56.2
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 7.2e-56 221.5 182 66.5
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 2.1e-55 219.9 241 54.8
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 8.7e-54 214.5 244 54.1
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 2.5e-53 213.0 236 56.8
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 4.3e-53 212.2 182 66.5
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.3e-52 210.7 174 67.8
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 2.2e-52 209.9 243 54.7
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 2.2e-52 209.9 243 54.7
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.8e-52 209.5 243 54.7
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 3.7e-52 209.1 185 63.8
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 1.8e-51 206.8 244 52.9
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 3.1e-51 206.1 246 54.9
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 3.1e-51 206.1 223 54.7
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 5.3e-51 205.3 175 65.1
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 5.3e-51 205.3 174 66.7
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 6.9e-51 204.9 241 53.9
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.4e-50 202.6 238 50.8
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 3.4e-50 202.6 241 51.0
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 4.5e-50 202.2 176 64.8
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 4.5e-50 202.2 184 65.2
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 5.9e-50 201.8 188 60.6
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 1.3e-49 200.7 243 50.2
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.7e-49 200.3 173 67.1
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 2.9e-49 199.5 184 64.1
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 3.8e-49 199.1 185 62.2
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 1.1e-48 197.6 172 65.1
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 1.4e-48 197.2 241 52.7
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.4e-48 197.2 243 49.4
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.2e-48 196.1 241 51.9
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 5.5e-48 195.3 241 49.4
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 5.5e-48 195.3 184 60.9
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 9.4e-48 194.5 172 64.0
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 2.1e-47 193.4 182 58.2
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 2.7e-47 193.0 171 63.2
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 3.6e-47 192.6 171 63.2
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 2.3e-46 189.9 174 63.2
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 8.8e-46 188.0 173 61.8
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 1.5e-45 187.2 241 50.6
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 1.7e-44 183.7 169 59.2
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 1.7e-44 183.7 146 69.2
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.2e-44 183.3 172 59.9
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.4e-43 180.6 187 54.0
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.8e-43 180.3 242 46.7
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 4.1e-43 179.1 185 57.3
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 4.1e-43 179.1 182 57.1
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 9.1e-43 177.9 185 54.1
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 2.0e-42 176.8 169 57.4
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 7.7e-42 174.9 169 59.8
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 7.7e-42 174.9 185 53.0
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 7.7e-42 174.9 185 53.0
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.9e-41 172.9 244 45.1
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 3.8e-41 172.6 169 55.6
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 1.4e-40 170.6 171 59.1
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 2.5e-40 169.9 148 63.5
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.2e-39 167.5 244 43.0
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 4.7e-39 165.6 244 46.7
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 1.0e-38 164.5 244 46.7
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 1.4e-38 164.1 175 53.1
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 3.9e-38 162.5 169 53.8
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 2.0e-37 160.2 148 64.2
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 3.3e-37 159.5 168 55.4
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 4.4e-37 159.1 175 51.4
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 5.7e-37 158.7 158 58.2
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 9.7e-37 157.9 181 52.5
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 2.8e-36 156.4 111 72.1
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 3.7e-36 156.0 181 53.6
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 8.2e-36 154.8 185 50.3
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 7.0e-35 151.8 178 50.6
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.2e-33 146.7 146 58.9
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 5.0e-33 145.6 170 51.2
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 1.9e-32 143.7 175 48.6
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 3.2e-32 142.9 243 38.3
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 4.2e-32 142.5 141 57.4
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 5.5e-32 142.1 170 51.8
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 1.3e-28 131.0 190 42.1
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.7e-28 130.6 147 54.4
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.2e-28 130.2 168 47.0
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.2e-28 130.2 198 43.9
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 3.7e-28 129.4 168 44.6
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 3.7e-28 129.4 168 44.6
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 4.1e-27 125.9 169 44.4
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 9.1e-27 124.8 146 51.4
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 1.7e-25 120.6 168 43.5
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 3.8e-25 119.4 75 82.7
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 5.5e-24 115.5 82 74.4
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 2.6e-21 106.7 88 64.8
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 3.4e-21 106.3 60 88.3
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 4.4e-21 105.9 184 41.8
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 3.7e-20 102.8 158 45.6
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 1.6e-18 97.4 62 80.6
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 5.9e-18 95.5 62 79.0
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 7.7e-18 95.1 88 59.1
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.3e-17 94.4 62 77.4
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 5.0e-17 92.4 90 60.0
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 1.2e-15 87.8 67 65.7
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 2.1e-15 87.0 90 56.7
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 1.5e-13 80.9 75 53.3
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 1.3e-12 77.8 60 71.7
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 3.7e-12 76.3 137 38.7
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.1e-11 72.8 118 47.5
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 2.7e-10 70.1 86 47.7
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 8.6e-09 65.1 84 47.6
CiPaw.15G164900 Carya illinoinensis HOM05D005762 ORTHO05D006823 1.6e-07 60.8 88 46.6
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 1.6e-07 60.8 54 61.1
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 4.0e-06 56.2 168 31.0


User provided reference genes

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