Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0912 Vigna mungo HOM05D037023 ORTHO05D017166 1.5e-74 282.7 140 100.0
VMungo1309G2115 Vigna mungo HOM05D000104 ORTHO05D003467 8.4e-41 170.6 100 89.0
VMungo1383G0634 Vigna mungo HOM05D037023 ORTHO05D017166 2.7e-39 165.6 100 86.0
VMungo1127G1155 Vigna mungo HOM05D037023 ORTHO05D017166 1.3e-38 163.3 101 84.2
VMungo0720G0250 Vigna mungo HOM05D003344 ORTHO05D003981 2.6e-34 149.1 93 84.9
Phvul.009G088700 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 4.9e-33 144.8 100 76.0
Glyma.06G063400 Glycine max HOM05D000104 ORTHO05D003467 6.9e-27 124.4 100 65.0
Glyma.04G062400 Glycine max HOM05D000104 ORTHO05D003467 2.2e-25 119.4 100 61.0
Medtr3g106210 Medicago truncatula HOM05D000104 ORTHO05D003467 2.3e-22 109.4 100 58.0
TPR.G3131 Trifolium pratense HOM05D000104 ORTHO05D003467 1.1e-21 107.1 91 60.4
Lj1g0020904 Lotus japonicus HOM05D000104 ORTHO05D003467 1.2e-18 97.1 87 56.3
Ca_13055_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 8.4e-17 90.9 100 49.0
Psat5g031880 Pisum sativum HOM05D000104 ORTHO05D003467 1.1e-16 90.5 95 52.6
arahy.Tifrunner.gnm1.ann1.QU94QB Arachis hypogaea HOM05D000104 ORTHO05D003467 4.2e-16 88.6 123 47.2
Lalb_Chr08g0244361 Lupinus albus HOM05D000104 ORTHO05D003467 6.0e-15 84.7 97 47.4
Lalb_Chr23g0268291 Lupinus albus HOM05D000104 ORTHO05D003467 1.6e-12 76.6 90 47.8
Ca_15766_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 8.2e-12 74.3 84 52.4
Glyma.17G217300 Glycine max HOM05D000104 ORTHO05D003467 8.2e-12 74.3 99 45.5
Atru.chr7.2523 Acer truncatum HOM05D000104 ORTHO05D017166 3.1e-11 72.4 83 43.4
Psat6g027200 Pisum sativum HOM05D000104 ORTHO05D003467 4.1e-11 72.0 102 42.2
Lalb_Chr24g0402041 Lupinus albus HOM05D000104 ORTHO05D003467 1.2e-10 70.5 74 52.7
QL02p019684 Quercus lobata HOM05D000104 ORTHO05D003467 1.5e-10 70.1 95 41.1
TWI63G1656 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 3.4e-10 68.9 119 37.0
Manes.16G127700 Manihot esculenta HOM05D000104 ORTHO05D003467 4.5e-10 68.6 97 42.3
CiPaw.08G007100 Carya illinoinensis HOM05D000104 ORTHO05D003467 7.6e-10 67.8 127 33.9
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 1.0e-09 67.4 89 43.8
GSVIVG01035901001 Vitis vinifera HOM05D000104 ORTHO05D003467 1.0e-09 67.4 70 50.0
Manes.03G010400 Manihot esculenta HOM05D000104 ORTHO05D003467 1.7e-09 66.6 92 39.1
Rhsim07G0163100 Rhododendron simsii HOM05D000104 ORTHO05D003467 1.7e-09 66.6 77 41.6
Ciclev10010331m.g Citrus clementina HOM05D000104 ORTHO05D003467 2.2e-09 66.2 69 47.8
vmacro05141 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 1.1e-08 63.9 89 38.2
MELO3C016973.2 Cucumis melo HOM05D000104 ORTHO05D003467 1.4e-08 63.5 82 42.7
TWI32G0850 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 1.4e-08 63.5 95 37.9
Sed0022321 Sechium edule HOM05D000104 ORTHO05D003467 2.5e-08 62.8 93 41.9
Sed0013682 Sechium edule HOM05D000104 ORTHO05D003467 3.2e-08 62.4 69 46.4
Rhsim02G0208100 Rhododendron simsii HOM05D000001 ORTHO05D009891 5.5e-08 61.6 103 38.8
HanXRQChr01g0030671 Helianthus annuus HOM05D000104 ORTHO05D003467 7.2e-08 61.2 85 41.2
CSS0003293 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 9.3e-08 60.8 70 40.0
PGR044G1954 Punica granatum HOM05D000104 ORTHO05D003467 9.3e-08 60.8 73 45.2
HanXRQChr07g0188191 Helianthus annuus HOM05D000104 ORTHO05D017166 1.2e-07 60.5 86 41.9
CSS0032982 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 2.1e-07 59.7 87 46.0
CsaV3_4G036700 Cucumis sativus L. HOM05D000104 ORTHO05D003467 2.7e-07 59.3 82 41.5
Rhsim02G0208200 Rhododendron simsii HOM05D000104 ORTHO05D003467 2.7e-07 59.3 100 37.0
Actinidia13201 Actinidia chinensis HOM05D000104 ORTHO05D017166 3.6e-07 58.9 94 34.0
ATR1153G016 Amborella trichopoda HOM05D000104 ORTHO05D003467 3.6e-07 58.9 82 39.0
Haze_21436 Corylus avellana HOM05D000104 ORTHO05D003467 3.6e-07 58.9 61 52.5
HanXRQChr11g0353801 Helianthus annuus HOM05D000104 ORTHO05D003467 7.9e-07 57.8 123 31.7
ClCG05G016460 Citrullus lanatus HOM05D000104 ORTHO05D003467 1.0e-06 57.4 69 43.5
ECA248G2891 Erigeron canadensis HOM05D000104 ORTHO05D003467 2.3e-06 56.2 85 43.5
Eucgr.G00556 Eucalyptus grandis HOM05D000104 ORTHO05D003467 3.0e-06 55.8 70 44.3
Lj7A730T43 Lonicera japonica HOM05D000104 ORTHO05D003467 3.9e-06 55.5 79 39.2
SEGI_33990 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 3.9e-06 55.5 88 35.2
Potri.018G021100 Populus trichocarpa HOM05D000104 ORTHO05D003467 5.1e-06 55.1 77 36.4
Prupe.1G391600 Prunus persica HOM05D000104 ORTHO05D003467 5.1e-06 55.1 76 42.1
Hma1.2p1_0392F.1_g143010 Hydrangea macrophylla HOM05D000104 ORTHO05D003467 8.7e-06 54.3 75 40.0


User provided reference genes

Program Settings