Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 9.6e-175 616.7 303 100.0
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 8.1e-166 587.0 303 94.4
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 3.6e-158 561.6 298 89.6
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 2.9e-147 525.4 299 85.6
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 4.2e-146 521.5 299 84.6
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 6.0e-145 517.7 299 83.6
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 1.3e-144 516.5 301 83.7
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 5.1e-144 514.6 302 82.8
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 3.4e-140 501.9 304 80.9
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 9.3e-138 493.8 291 82.1
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 4.1e-133 478.4 296 77.4
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 6.9e-133 477.6 301 78.1
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 3.4e-132 475.3 296 78.0
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 1.7e-131 473.0 301 76.4
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 2.5e-130 469.2 300 76.0
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 4.2e-130 468.4 298 75.5
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 1.0e-128 463.8 304 74.3
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 6.7e-128 461.1 304 74.3
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 4.4e-127 458.4 304 73.0
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.7e-127 458.0 298 74.2
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 9.7e-127 457.2 299 74.6
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.3e-126 456.8 291 75.3
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 1.8e-125 453.0 297 73.4
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 5.3e-125 451.4 295 72.5
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 9.1e-125 450.7 306 72.5
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.2e-124 450.3 298 73.8
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 3.4e-124 448.7 301 71.4
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.5e-122 442.6 301 70.1
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 5.5e-122 441.4 301 69.8
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.2e-121 440.3 301 69.8
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 2.7e-121 439.1 295 71.9
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.7e-121 438.3 300 69.7
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 7.9e-121 437.6 308 69.2
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 2.3e-120 436.0 304 68.1
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 3.0e-120 435.6 296 70.6
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 3.0e-120 435.6 304 69.4
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 3.9e-120 435.3 300 70.0
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 3.9e-120 435.3 296 70.3
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 5.2e-120 434.9 299 70.2
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 8.8e-120 434.1 307 68.4
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 1.5e-119 433.3 305 69.8
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 2.0e-119 433.0 290 70.7
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 2.0e-119 433.0 298 70.1
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 2.6e-119 432.6 296 69.9
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 5.7e-119 431.4 296 69.6
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 7.4e-119 431.0 298 69.8
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.7e-118 429.9 307 69.1
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 2.2e-118 429.5 295 69.5
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.2e-118 429.5 294 71.1
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 5.3e-117 424.9 302 70.5
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.2e-116 423.7 309 68.3
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 1.2e-116 423.7 312 67.6
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 1.2e-116 423.7 297 68.0
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 1.6e-116 423.3 306 67.0
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 2.0e-116 422.9 301 67.8
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 1.3e-115 420.2 321 66.7
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 9.4e-114 414.1 296 69.9
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 1.2e-113 413.7 291 69.4
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 3.6e-113 412.1 307 66.4
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 4.7e-113 411.8 287 66.6
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 2.3e-112 409.5 304 64.8
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 1.5e-111 406.8 301 66.1
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 1.5e-111 406.8 302 66.6
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 2.0e-111 406.4 301 64.8
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 4.4e-111 405.2 306 67.0
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 7.5e-111 404.4 248 77.8
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 8.2e-110 401.0 309 64.7
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 3.1e-109 399.1 302 65.6
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 4.1e-109 398.7 300 65.0
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 3.5e-108 395.6 295 64.7
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 5.9e-108 394.8 296 63.5
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 5.9e-108 394.8 304 64.5
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.2e-107 392.9 281 69.8
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 2.2e-107 392.9 302 64.2
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 6.5e-107 391.3 300 62.3
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 6.5e-107 391.3 292 63.4
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 5.5e-106 388.3 298 62.4
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 8.8e-104 380.9 300 61.3
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 9.8e-103 377.5 305 61.6
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 6.3e-102 374.8 307 60.9
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 1.1e-101 374.0 287 61.3
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 7.0e-101 371.3 290 62.8
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 4.7e-97 358.6 305 61.0
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 4.4e-95 352.1 307 59.9
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 3.5e-92 342.4 298 56.0
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 7.8e-92 341.3 229 69.0
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 4.3e-90 335.5 234 70.9
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 5.6e-90 335.1 232 71.6
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 1.2e-89 334.0 242 66.9
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.3e-88 329.7 294 58.5
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 1.1e-85 320.9 266 61.7
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 2.6e-79 299.7 417 39.3
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 3.7e-78 295.8 230 66.5
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.9e-78 295.4 298 52.3
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.4e-77 293.9 293 53.9
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.3e-75 286.6 198 69.2
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 2.1e-73 280.0 202 65.8
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 1.3e-67 260.8 189 63.5
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.9e-67 259.2 289 51.6
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 8.6e-67 258.1 207 61.4
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 5.4e-61 238.8 165 64.2
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 3.0e-59 233.0 168 70.2
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 9.6e-58 228.0 190 64.7
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 1.4e-56 224.2 127 75.6
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 5.2e-56 222.2 251 49.8
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 4.9e-54 215.7 158 67.1
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 6.4e-54 215.3 146 68.5
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 6.4e-54 215.3 146 68.5
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 1.1e-53 214.5 133 72.2
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 2.4e-53 213.4 161 66.5
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 3.2e-53 213.0 139 69.1
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.6e-49 199.5 103 88.3
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.7e-46 190.7 166 58.4
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 2.2e-46 190.3 123 82.1
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.9e-42 177.2 128 65.6
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 5.6e-42 175.6 127 63.0
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.4e-38 161.8 137 65.0
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 1.5e-31 141.0 97 75.3
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 1.8e-24 117.5 139 46.8
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.0e-24 115.2 100 57.0
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.0e-24 115.2 100 57.0
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.0e-23 114.0 101 57.4
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.0e-23 114.0 100 56.0
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 7.9e-20 102.1 166 37.3
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.3e-19 100.5 84 60.7
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 9.7e-18 95.1 84 53.6
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 6.9e-16 89.0 71 59.2
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.1e-10 71.6 56 66.1
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 1.3e-09 68.2 65 52.3
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 1.7e-09 67.8 52 57.7
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 2.2e-09 67.4 65 52.3


User provided reference genes

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