Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0464G1907 Vigna mungo HOM05D003257 ORTHO05D003749 2.6e-109 398.7 194 100.0
VMungo0647G2577 Vigna mungo HOM05D003257 ORTHO05D003749 2.4e-78 295.8 143 97.2
Glyma.06G325300 Glycine max HOM05D003257 ORTHO05D003749 2.7e-74 282.3 143 92.3
Glyma.04G256100 Glycine max HOM05D003257 ORTHO05D003749 6.7e-73 277.7 143 90.9
arahy.Tifrunner.gnm1.ann1.ZYH4BX Arachis hypogaea HOM05D003257 ORTHO05D003749 4.8e-71 271.6 143 88.8
arahy.Tifrunner.gnm1.ann1.BPEV7T Arachis hypogaea HOM05D003257 ORTHO05D003749 8.2e-71 270.8 139 90.6
Lj3g0005174 Lotus japonicus HOM05D003257 ORTHO05D003749 5.3e-70 268.1 143 88.1
Lalb_Chr03g0037991 Lupinus albus HOM05D003257 ORTHO05D003749 1.7e-68 263.1 143 86.0
Medtr1g040105 Medicago truncatula HOM05D003257 ORTHO05D003749 2.9e-68 262.3 143 85.3
Lalb_Chr01g0020651 Lupinus albus HOM05D003257 ORTHO05D003749 5.5e-67 258.1 143 84.6
TPR.G30222 Trifolium pratense HOM05D003257 ORTHO05D003749 5.5e-67 258.1 143 85.3
CiPaw.02G126200 Carya illinoinensis HOM05D003257 ORTHO05D003749 1.6e-66 256.5 143 84.6
FvH4_1g00040 Fragaria vesca HOM05D003257 ORTHO05D003749 3.6e-66 255.4 141 83.7
FAN28G1981 Fragaria x ananassa HOM05D003257 ORTHO05D003749 3.6e-66 255.4 141 83.7
Psat6g114760 Pisum sativum HOM05D003257 ORTHO05D003749 1.0e-65 253.8 143 81.1
CiPaw.01G204000 Carya illinoinensis HOM05D003257 ORTHO05D003749 1.4e-65 253.4 141 84.4
FAN23G0512 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.4e-65 253.4 141 83.0
FAN26G1737 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.4e-65 253.4 141 83.0
Ca_26297_v3 Cicer arietinum L. HOM05D003257 ORTHO05D003749 3.0e-65 252.3 143 83.9
Haze_11091 Corylus avellana HOM05D003257 ORTHO05D003749 6.8e-65 251.1 143 82.5
MD02G1001200 Malus domestica HOM05D003257 ORTHO05D003749 6.8e-65 251.1 143 81.1
Prupe.7G271500 Prunus persica HOM05D003257 ORTHO05D003749 5.7e-64 248.1 139 81.3
RcHm_v2.0_Chr2g0084261 Rosa chinensis HOM05D003257 ORTHO05D003749 7.5e-64 247.7 143 80.4
QL10p065198 Quercus lobata HOM05D003257 ORTHO05D003749 1.3e-63 246.9 142 81.7
Cfa008541 Carpinus fangiana HOM05D003257 ORTHO05D003749 2.2e-63 246.1 143 81.1
Dinv24735 Davidia involucrata HOM05D003257 ORTHO05D003749 4.8e-63 245.0 143 79.7
MD15G1141700 Malus domestica HOM05D003257 ORTHO05D003749 4.1e-62 241.9 137 81.0
MELO3C027379.2 Cucumis melo HOM05D003257 ORTHO05D003749 7.0e-62 241.1 143 77.6
GSVIVG01019374001 Vitis vinifera HOM05D003257 ORTHO05D003749 7.0e-62 241.1 139 79.9
Actinidia18382 Actinidia chinensis HOM05D003257 ORTHO05D003749 9.1e-62 240.7 141 79.4
TAR633G0285 Trochodendron aralioides HOM05D003257 ORTHO05D003749 9.1e-62 240.7 143 77.6
CAN.G1177.14 Capsicum annuum HOM05D003257 ORTHO05D003749 1.2e-61 240.4 143 77.6
Solyc11g008870.2 Solanum lycopersicum HOM05D003257 ORTHO05D003749 1.2e-61 240.4 143 76.9
Sopen11g004650 Solanum pennellii HOM05D003257 ORTHO05D003749 1.2e-61 240.4 143 76.9
vmacro00737 Vaccinium macrocarpon HOM05D003257 ORTHO05D003749 1.2e-61 240.4 140 80.0
Potri.017G000300 Populus trichocarpa HOM05D003257 ORTHO05D003749 1.6e-61 240.0 143 77.6
CsaV3_2G011840 Cucumis sativus L. HOM05D003257 ORTHO05D003749 2.0e-61 239.6 143 76.9
Rhsim09G0000900 Rhododendron simsii HOM05D003257 ORTHO05D003749 2.0e-61 239.6 153 74.5
PGR042G2645 Punica granatum HOM05D003257 ORTHO05D003749 2.7e-61 239.2 144 77.8
THA.LOC104804412 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 2.7e-61 239.2 141 75.2
TWI15G1037 Tripterygium wilfordii HOM05D003257 ORTHO05D003749 2.7e-61 239.2 143 76.2
TAR362G0403 Trochodendron aralioides HOM05D003257 ORTHO05D003749 2.7e-61 239.2 143 76.2
Ciclev10019406m.g Citrus clementina HOM05D003257 ORTHO05D003749 3.5e-61 238.8 139 79.1
PGSC0003DMG400016168 Solanum tuberosum HOM05D003257 ORTHO05D003749 3.5e-61 238.8 143 77.6
A09p52310 Brassica napus HOM05D003257 ORTHO05D003749 4.5e-61 238.4 149 74.5
ClCG06G008390 Citrullus lanatus HOM05D003257 ORTHO05D003749 4.5e-61 238.4 143 76.2
Nitab4.5_0001653g0120 Nicotiana tabacum HOM05D003257 ORTHO05D003749 5.9e-61 238.0 143 76.2
Phvul.007G281200 Phaseolus vulgaris HOM05D003257 ORTHO05D003749 5.9e-61 238.0 117 94.0
Potri.007G147300 Populus trichocarpa HOM05D003257 ORTHO05D003749 5.9e-61 238.0 143 76.9
Cpa.g.sc9.233 Carica papaya HOM05D003257 ORTHO05D003749 7.7e-61 237.7 143 74.1
Sabra17G0005200 Salix brachista HOM05D003257 ORTHO05D003749 7.7e-61 237.7 143 76.9
BcaC07g40537 Brassica carinata HOM05D003257 ORTHO05D003749 1.0e-60 237.3 149 74.5
C08p34970 Brassica napus HOM05D003257 ORTHO05D003749 1.0e-60 237.3 149 74.5
BraA09t40660Z Brassica rapa HOM05D003257 ORTHO05D003749 1.3e-60 236.9 149 73.8
CAN.G694.27 Capsicum annuum HOM05D003257 ORTHO05D003749 1.3e-60 236.9 143 77.6
Peaxi162Scf00156g00015 Petunia axillaris HOM05D003257 ORTHO05D003749 1.3e-60 236.9 143 76.9
Sed0018493 Sechium edule HOM05D003257 ORTHO05D003749 1.3e-60 236.9 143 76.2
BcaC07g40402 Brassica carinata HOM05D003257 ORTHO05D003749 1.7e-60 236.5 149 73.8
AUR62002512 Chenopodium quinoa HOM05D003257 ORTHO05D003749 1.7e-60 236.5 140 75.0
AUR62023682 Chenopodium quinoa HOM05D003257 ORTHO05D003749 1.7e-60 236.5 140 75.0
Nitab4.5_0000971g0090 Nicotiana tabacum HOM05D003257 ORTHO05D003749 2.2e-60 236.1 143 76.2
SGA_v2.0_scaffold19G08917 Striga asiatica HOM05D003257 ORTHO05D003749 2.2e-60 236.1 143 76.9
Atru.chr3.2621 Acer truncatum HOM05D003257 ORTHO05D003749 2.9e-60 235.7 139 77.0
Oeu028194.1 Olea europaea HOM05D003257 ORTHO05D003749 2.9e-60 235.7 143 76.2
THA.LOC104802525 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 2.9e-60 235.7 140 75.0
BcaC08g45017 Brassica carinata HOM05D003257 ORTHO05D003749 3.8e-60 235.3 149 72.5
C06p26490 Brassica napus HOM05D003257 ORTHO05D003749 3.8e-60 235.3 149 72.5
BolC6t37812H Brassica oleracea HOM05D003257 ORTHO05D003749 3.8e-60 235.3 149 72.5
BolC8t51101H Brassica oleracea HOM05D003257 ORTHO05D003749 3.8e-60 235.3 149 73.8
Sed0024427 Sechium edule HOM05D003257 ORTHO05D003749 3.8e-60 235.3 143 72.7
BraA07t30134Z Brassica rapa HOM05D003257 ORTHO05D003749 6.5e-60 234.6 149 72.5
Thhalv10005854m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 6.5e-60 234.6 149 73.8
Gohir.A10G127700 Gossypium hirsutum HOM05D003257 ORTHO05D003749 8.5e-60 234.2 143 74.8
Nn7g37414 Nelumbo nucifera HOM05D003257 ORTHO05D003749 8.5e-60 234.2 143 74.8
AT3G59970 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 1.9e-59 233.0 149 72.5
Gohir.D10G138300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.9e-59 233.0 139 76.3
Gorai.011G153400 Gossypium raimondii HOM05D003257 ORTHO05D003749 1.9e-59 233.0 139 76.3
Peaxi162Scf00344g00056 Petunia axillaris HOM05D003257 ORTHO05D003749 1.9e-59 233.0 152 73.0
A07p24920 Brassica napus HOM05D003257 ORTHO05D003749 2.5e-59 232.6 149 71.8
CSS0030539 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 2.5e-59 232.6 143 76.2
Carub.0005s2670 Capsella rubella HOM05D003257 ORTHO05D003749 2.5e-59 232.6 149 73.2
DCAR_005464 Daucus carota HOM05D003257 ORTHO05D003749 2.5e-59 232.6 143 74.1
PGSC0003DMG400023361 Solanum tuberosum HOM05D003257 ORTHO05D003749 2.5e-59 232.6 150 71.3
SalBow6G1509 Salvia bowleyana HOM05D003257 ORTHO05D003749 3.2e-59 232.3 139 76.3
Duzib151G0199 Durio zibethinus HOM05D003257 ORTHO05D003749 4.2e-59 231.9 143 73.4
Nitab4.5_0003263g0060 Nicotiana tabacum HOM05D003257 ORTHO05D003749 4.2e-59 231.9 143 75.5
Aa31LG1G25830 Aethionema arabicum HOM05D003257 ORTHO05D003749 7.2e-59 231.1 150 69.3
AT2G44160 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 7.2e-59 231.1 143 74.8
Thhalv10001367m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 7.2e-59 231.1 143 74.1
Solyc05g055730.4 Solanum lycopersicum HOM05D003257 ORTHO05D003749 7.2e-59 231.1 150 70.7
CSS0014401 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 1.2e-58 230.3 143 74.8
CSS0029511 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 1.2e-58 230.3 143 74.8
Sopen05g034140 Solanum pennellii HOM05D003257 ORTHO05D003749 1.6e-58 229.9 143 73.4
CDE07G1142 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 2.1e-58 229.6 143 73.4
C04p05050 Brassica napus HOM05D003257 ORTHO05D003749 2.7e-58 229.2 139 74.8
BolC4t22138H Brassica oleracea HOM05D003257 ORTHO05D003749 2.7e-58 229.2 139 74.8
Manes.01G008800 Manihot esculenta HOM05D003257 ORTHO05D003749 2.7e-58 229.2 143 74.1
AL5G42150 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 3.6e-58 228.8 149 71.8
Sp5g03210 Schrenkiella parvula HOM05D003257 ORTHO05D003749 3.6e-58 228.8 149 73.2
COL.COLO4_20225 Corchorus olitorius HOM05D003257 ORTHO05D003749 4.7e-58 228.4 143 72.0
Sc19g0002470 Simmondsia chinensis HOM05D003257 ORTHO05D003749 4.7e-58 228.4 139 73.4
MSTRG.24536 Avicennia marina HOM05D003257 ORTHO05D003749 8.0e-58 227.6 143 73.4
EL10Ac3g06195 Beta vulgaris HOM05D003257 ORTHO05D003749 8.0e-58 227.6 139 74.1
BcaC02g12332 Brassica carinata HOM05D003257 ORTHO05D003749 8.0e-58 227.6 139 74.1
Carub.0004s2671 Capsella rubella HOM05D003257 ORTHO05D003749 8.0e-58 227.6 143 73.4
CARHR170290 Cardamine hirsuta HOM05D003257 ORTHO05D003749 8.0e-58 227.6 149 71.1
BcaB01g03327 Brassica carinata HOM05D003257 ORTHO05D003749 1.0e-57 227.3 139 74.1
CANSAT56G2399 Cannabis sativa HOM05D003257 ORTHO05D003749 1.0e-57 227.3 144 74.3
Sp4g26240 Schrenkiella parvula HOM05D003257 ORTHO05D003749 1.4e-57 226.9 139 74.1
AL4G43040 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 2.3e-57 226.1 143 72.7
Duzib212G0020 Durio zibethinus HOM05D003257 ORTHO05D003749 2.3e-57 226.1 143 72.0
BraA05t19412Z Brassica rapa HOM05D003257 ORTHO05D003749 3.0e-57 225.7 140 74.3
DCAR_027487 Daucus carota HOM05D003257 ORTHO05D003749 3.0e-57 225.7 137 74.5
Hund22692 Selenicereus undatus HOM05D003257 ORTHO05D003749 3.0e-57 225.7 174 65.5
CARHR139330 Cardamine hirsuta HOM05D003257 ORTHO05D003749 5.2e-57 224.9 139 74.1
PSO339G3074 Papaver somniferum HOM05D003257 ORTHO05D003749 5.2e-57 224.9 143 72.7
PSO384G1169 Papaver somniferum HOM05D003257 ORTHO05D003749 5.2e-57 224.9 143 72.7
Aa31LG10G14190 Aethionema arabicum HOM05D003257 ORTHO05D003749 6.8e-57 224.6 152 69.1
CDE06G0339 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 6.8e-57 224.6 143 73.4
Eucgr.A00394 Eucalyptus grandis HOM05D003257 ORTHO05D003749 6.8e-57 224.6 144 72.9
A05p04270 Brassica napus HOM05D003257 ORTHO05D003749 8.8e-57 224.2 140 73.6
Migut.N03006 Erythranthe guttata HOM05D003257 ORTHO05D003749 8.8e-57 224.2 143 71.3
HanXRQChr06g0170341 Helianthus annuus HOM05D003257 ORTHO05D003749 8.8e-57 224.2 162 67.9
Nn1g09394 Nelumbo nucifera HOM05D003257 ORTHO05D003749 8.8e-57 224.2 143 70.6
unitig_27.g25139 Utricularia gibba HOM05D003257 ORTHO05D003749 1.5e-56 223.4 139 73.4
Duzib268G1600 Durio zibethinus HOM05D003257 ORTHO05D003749 4.4e-56 221.9 143 70.6
Aqoxy2G00629 Aquilegia oxysepala HOM05D003257 ORTHO05D003749 7.5e-56 221.1 143 70.6
SGA_v2.0_scaffold12G06250 Striga asiatica HOM05D003257 ORTHO05D003749 7.5e-56 221.1 143 72.0
BcaB06g29359 Brassica carinata HOM05D003257 ORTHO05D003749 1.7e-55 219.9 139 71.9
Pp3c24_960 Physcomitrium patens HOM05D003257 ORTHO05D003749 1.7e-55 219.9 140 71.4
HanXRQChr04g0120771 Helianthus annuus HOM05D003257 ORTHO05D003749 2.2e-55 219.5 143 71.3
ECA236G5120 Erigeron canadensis HOM05D003257 ORTHO05D003749 2.8e-55 219.2 143 72.0
Gorai.006G223600 Gossypium raimondii HOM05D003257 ORTHO05D003749 2.8e-55 219.2 143 68.5
Lju124A8T11 Lonicera japonica HOM05D003257 ORTHO05D003749 2.8e-55 219.2 153 72.5
BcaB06g29361 Brassica carinata HOM05D003257 ORTHO05D003749 3.7e-55 218.8 140 72.9
Gohir.A09G206300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 3.7e-55 218.8 143 68.5
C04p70910 Brassica napus HOM05D003257 ORTHO05D003749 4.9e-55 218.4 140 72.1
Os03g0815200 Oryza sativa ssp. japonica HOM05D003257 ORTHO05D003749 6.3e-55 218.0 139 72.7
SalBow3G4227 Salvia bowleyana HOM05D003257 ORTHO05D003749 6.3e-55 218.0 140 70.7
A04p33220 Brassica napus HOM05D003257 ORTHO05D003749 1.1e-54 217.2 140 71.4
BraA04t18781Z Brassica rapa HOM05D003257 ORTHO05D003749 1.1e-54 217.2 140 71.4
CANSAT54G2167 Cannabis sativa HOM05D003257 ORTHO05D003749 1.4e-54 216.9 145 73.1
Gohir.D09G199900 Gossypium hirsutum HOM05D003257 ORTHO05D003749 4.1e-54 215.3 143 67.1
Zm00001eb062180 Zea mays HOM05D003257 ORTHO05D003749 7.7e-53 211.1 139 68.3
Zm00001eb440710 Zea mays HOM05D003257 ORTHO05D003749 7.7e-53 211.1 139 68.3
Thecc.04G195400 Theobroma cacao HOM05D003257 ORTHO05D003749 1.0e-52 210.7 143 69.2
Pp3c10_24030 Physcomitrium patens HOM05D003257 ORTHO05D003749 1.3e-52 210.3 140 67.9
SEGI_28465 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 1.3e-52 210.3 137 70.1
AagrBONN_evm.TU.Sc2ySwM_344.3446 Anthoceros agrestis HOM05D003257 ORTHO05D003749 2.9e-52 209.1 136 71.3
Lsat_1_v5_gn_7_3921 Lactuca sativa HOM05D003257 ORTHO05D003749 1.9e-51 206.5 144 68.8
Hund12292 Selenicereus undatus HOM05D003257 ORTHO05D003749 5.6e-51 204.9 128 71.1
Mapoly0107s0040 Marchantia polymorpha HOM05D003257 ORTHO05D003749 2.3e-49 199.5 136 67.6
Ah.07g203400 Amaranthus hybridus HOM05D003257 ORTHO05D003749 3.0e-49 199.1 116 75.9
SMO367G0955 Selaginella moellendorffii HOM05D003257 ORTHO05D003749 4.4e-48 195.3 141 65.2
Actinidia02460 Actinidia chinensis HOM05D003257 ORTHO05D003749 1.4e-46 190.3 119 73.9
ATR0053G017 Amborella trichopoda HOM05D003257 ORTHO05D003749 4.6e-45 185.3 116 70.7
Sc25g0002280 Simmondsia chinensis HOM05D003257 ORTHO05D003749 5.9e-45 184.9 123 69.9
AL4G43080 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 9.5e-43 177.6 110 72.7
RcHm_v2.0_Chr1g0319671 Rosa chinensis HOM05D003257 ORTHO05D003749 1.3e-39 167.2 136 63.2
SGA_v2.0_scaffold25G11024 Striga asiatica HOM05D003257 ORTHO05D003749 2.2e-39 166.4 143 60.8
CBR_g37215 Chara braunii HOM05D003257 ORTHO05D003749 2.9e-39 166.0 141 55.3
Nitab4.5_0006595g0040 Nicotiana tabacum HOM05D003257 ORTHO05D003749 4.9e-39 165.2 96 78.1
Cre10.g433600 Chlamydomonas reinhardtii HOM05D003257 ORTHO05D003749 5.4e-38 161.8 132 57.6
THA.LOC104823108 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 1.6e-37 160.2 94 74.5
CAN.G532.79 Capsicum annuum HOM05D003257 ORTHO05D003749 3.0e-36 156.0 92 77.2
AL6G43600 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 3.9e-36 155.6 91 76.9
PRCOL_00004214 Prasinoderma coloniale HOM05D003257 ORTHO05D003749 1.1e-35 154.1 141 51.1
Hma1.2p1_1372F.1_g278690 Hydrangea macrophylla HOM05D003257 ORTHO05D003749 1.9e-35 153.3 153 54.2
AL5G24360 Arabidopsis lyrata HOM05D003257 ORTHO05D001652 2.1e-34 149.8 95 72.6
BcaB01g06154 Brassica carinata HOM05D003257 ORTHO05D003749 1.5e-32 143.7 112 59.8
SEGI_40039 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 1.5e-32 143.7 160 49.4
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 5.1e-28 128.6 75 78.7
Cfa021656 Carpinus fangiana HOM05D003257 ORTHO05D003749 9.5e-27 124.4 149 43.0
FvH4_7g02331 Fragaria vesca HOM05D003257 ORTHO05D003749 1.6e-26 123.6 89 65.2
SEGI_02109 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 8.1e-18 94.7 69 59.4
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 1.1e-17 94.4 76 60.5
Lj2A826G20 Lonicera japonica HOM05D003257 ORTHO05D003749 1.7e-15 87.0 84 57.1
MBI15_g33460_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 1.2e-13 80.9 135 37.8
GSVIVG01038275001 Vitis vinifera HOM05D003257 ORTHO05D003749 1.3e-12 77.4 50 68.0
MBI15_g33461_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 3.3e-11 72.8 44 70.5
BolC3t12564H Brassica oleracea HOM05D003257 ORTHO05D005573 1.1e-06 57.8 39 53.8


User provided reference genes

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