Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0464G1388 Vigna mungo HOM05D004929 ORTHO05D006492 5.2e-204 714.1 358 100.0
Phvul.004G004700 Phaseolus vulgaris HOM05D004929 ORTHO05D006492 1.5e-182 642.9 357 89.1
Glyma.05G002500 Glycine max HOM05D004929 ORTHO05D006492 6.4e-178 627.5 350 86.6
TPR.G31950 Trifolium pratense HOM05D004929 ORTHO05D006492 7.6e-163 577.4 353 80.2
Medtr6g004430 Medicago truncatula HOM05D004929 ORTHO05D006492 1.9e-161 572.8 347 80.7
arahy.Tifrunner.gnm1.ann1.FEY4ZS Arachis hypogaea HOM05D004929 ORTHO05D006492 5.4e-161 571.2 346 80.1
arahy.Tifrunner.gnm1.ann1.NF5K9F Arachis hypogaea HOM05D004929 ORTHO05D006492 1.6e-160 569.7 346 79.8
Lj2g0024676 Lotus japonicus HOM05D004929 ORTHO05D006492 1.8e-159 566.2 356 78.7
Ca_04143_v3 Cicer arietinum L. HOM05D004929 ORTHO05D006492 5.1e-159 564.7 347 80.1
ClCG09G019380 Citrullus lanatus HOM05D004929 ORTHO05D006492 4.8e-157 558.1 348 76.4
Lalb_Chr06g0176621 Lupinus albus HOM05D004929 ORTHO05D006492 1.8e-156 556.2 351 76.4
Haze_14758 Corylus avellana HOM05D004929 ORTHO05D006492 3.1e-156 555.4 347 77.8
MELO3C021592.2 Cucumis melo HOM05D004929 ORTHO05D006492 4.0e-156 555.1 348 76.7
CsaV3_5G027030 Cucumis sativus L. HOM05D004929 ORTHO05D006492 6.9e-156 554.3 346 77.5
Nn8g40033 Nelumbo nucifera HOM05D004929 ORTHO05D006492 6.9e-156 554.3 350 76.3
Cfa007339 Carpinus fangiana HOM05D004929 ORTHO05D006492 1.2e-155 553.5 348 77.3
CiPaw.03G045500 Carya illinoinensis HOM05D004929 ORTHO05D006492 2.0e-155 552.7 347 77.8
CiPaw.04G029600 Carya illinoinensis HOM05D004929 ORTHO05D006492 3.4e-155 552.0 347 77.8
Thecc.04G019500 Theobroma cacao HOM05D004929 ORTHO05D006492 2.2e-154 549.3 346 77.7
Sed0020215 Sechium edule HOM05D004929 ORTHO05D006492 6.4e-154 547.7 348 76.4
GSVIVG01032385001 Vitis vinifera HOM05D004929 ORTHO05D006492 6.4e-154 547.7 346 77.7
QL02p074005 Quercus lobata HOM05D004929 ORTHO05D006492 1.1e-153 547.0 350 76.0
Gohir.A09G030100 Gossypium hirsutum HOM05D004929 ORTHO05D006492 2.4e-153 545.8 346 75.7
Potri.001G343400 Populus trichocarpa HOM05D004929 ORTHO05D006492 3.2e-153 545.4 351 75.8
Lju41A43T26 Lonicera japonica HOM05D004929 ORTHO05D006492 4.2e-153 545.0 350 75.4
Gohir.D09G029800 Gossypium hirsutum HOM05D004929 ORTHO05D006492 5.5e-153 544.7 346 76.0
Gorai.006G034800 Gossypium raimondii HOM05D004929 ORTHO05D006492 5.5e-153 544.7 346 76.3
MD09G1023000 Malus domestica HOM05D004929 ORTHO05D006492 5.5e-153 544.7 350 77.1
Sabra16G0222700 Salix brachista HOM05D004929 ORTHO05D006492 5.5e-153 544.7 351 75.2
Rhsim10G0014700 Rhododendron simsii HOM05D004929 ORTHO05D006492 9.3e-153 543.9 350 76.3
Ciclev10015593m.g Citrus clementina HOM05D004929 ORTHO05D006492 2.7e-152 542.3 346 76.0
Aqoxy5G00914 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 4.6e-152 541.6 348 75.6
Duzib147G0164 Durio zibethinus HOM05D004929 ORTHO05D006492 4.6e-152 541.6 346 76.3
Sed0027438 Sechium edule HOM05D004929 ORTHO05D006492 6.0e-152 541.2 346 76.0
Actinidia05982 Actinidia chinensis HOM05D004929 ORTHO05D006492 1.8e-151 539.7 346 74.6
Prupe.3G293800 Prunus persica HOM05D004929 ORTHO05D006492 1.8e-151 539.7 346 76.6
FvH4_6g51800 Fragaria vesca HOM05D004929 ORTHO05D006492 2.3e-151 539.3 350 75.4
MD17G1022300 Malus domestica HOM05D004929 ORTHO05D006492 2.3e-151 539.3 350 76.0
Cc09_g04510 Coffea canephora HOM05D004929 ORTHO05D006492 3.0e-151 538.9 350 74.9
Manes.15G151900 Manihot esculenta HOM05D004929 ORTHO05D006492 3.0e-151 538.9 353 74.8
RcHm_v2.0_Chr2g0173281 Rosa chinensis HOM05D004929 ORTHO05D006492 6.7e-151 537.7 350 75.1
FAN09G2944 Fragaria x ananassa HOM05D004929 ORTHO05D006492 8.7e-151 537.3 350 75.1
FAN14G2766 Fragaria x ananassa HOM05D004929 ORTHO05D006492 8.7e-151 537.3 350 75.1
Dinv25726 Davidia involucrata HOM05D004929 ORTHO05D006492 4.3e-150 535.0 350 74.9
CANSAT64G1903 Cannabis sativa HOM05D004929 ORTHO05D006492 5.6e-150 534.6 346 74.9
TAR633G2310 Trochodendron aralioides HOM05D004929 ORTHO05D006492 1.6e-149 533.1 343 75.2
FAN05G4087 Fragaria x ananassa HOM05D004929 ORTHO05D006492 2.1e-149 532.7 346 75.1
PSO699G0033 Papaver somniferum HOM05D004929 ORTHO05D006492 3.7e-149 531.9 349 73.1
PGR142G3088 Punica granatum HOM05D004929 ORTHO05D006492 8.2e-149 530.8 346 75.1
Peaxi162Scf03028g00012 Petunia axillaris HOM05D004929 ORTHO05D006492 1.4e-148 530.0 350 74.6
PSO384G0906 Papaver somniferum HOM05D004929 ORTHO05D006492 2.4e-148 529.3 350 72.6
Carub.0003s0042 Capsella rubella HOM05D004929 ORTHO05D006492 3.1e-148 528.9 346 73.7
vmacro05876 Vaccinium macrocarpon HOM05D004929 ORTHO05D006492 3.1e-148 528.9 350 73.1
Peaxi162Scf00129g01650 Petunia axillaris HOM05D004929 ORTHO05D006492 4.0e-148 528.5 350 74.3
AL3G10510 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 9.0e-148 527.3 346 72.8
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 9.0e-148 527.3 348 72.7
THA.LOC104821096 Tarenaya hassleriana HOM05D004929 ORTHO05D006492 9.0e-148 527.3 346 73.7
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 1.5e-147 526.6 346 74.3
TWI12G0632 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 2.0e-147 526.2 347 74.1
SalBow7G3047 Salvia bowleyana HOM05D004929 ORTHO05D006492 2.6e-147 525.8 358 70.7
MSTRG.3138 Avicennia marina HOM05D004929 ORTHO05D006492 7.6e-147 524.2 346 72.5
Solyc02g093440.4 Solanum lycopersicum HOM05D004929 ORTHO05D006492 7.6e-147 524.2 350 73.4
Aqoxy4G03095 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 1.3e-146 523.5 348 72.4
FAN02G0047 Fragaria x ananassa HOM05D004929 ORTHO05D006492 1.7e-146 523.1 362 71.8
CARHR075280 Cardamine hirsuta HOM05D004929 ORTHO05D006492 2.2e-146 522.7 346 72.5
Nitab4.5_0001860g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 2.2e-146 522.7 350 72.9
Sp3g00410 Schrenkiella parvula HOM05D004929 ORTHO05D006492 2.2e-146 522.7 346 72.0
BcaC01g04530 Brassica carinata HOM05D004929 ORTHO05D006492 2.9e-146 522.3 346 71.7
Sopen02g038230 Solanum pennellii HOM05D004929 ORTHO05D006492 2.9e-146 522.3 350 73.4
AT3G01640 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 3.8e-146 521.9 346 72.3
arahy.Tifrunner.gnm1.ann1.BJ3QP1 Arachis hypogaea HOM05D004929 ORTHO05D006492 4.9e-146 521.5 313 80.8
CAN.G473.20 Capsicum annuum HOM05D004929 ORTHO05D006492 6.5e-146 521.2 357 71.4
Aa31LG5G10780 Aethionema arabicum HOM05D004929 ORTHO05D006492 8.4e-146 520.8 346 73.1
BraA03t12414Z Brassica rapa HOM05D004929 ORTHO05D006492 8.4e-146 520.8 346 71.4
TWI56G0780 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 1.4e-145 520.0 346 72.8
Migut.K01411 Erythranthe guttata HOM05D004929 ORTHO05D006492 2.5e-145 519.2 350 70.9
Carub.0006s1265 Capsella rubella HOM05D004929 ORTHO05D006492 3.2e-145 518.8 353 70.5
Thhalv10020980m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 3.2e-145 518.8 346 71.4
Lsat_1_v5_gn_0_18301 Lactuca sativa HOM05D004929 ORTHO05D006492 3.2e-145 518.8 349 71.1
PGSC0003DMG400012608 Solanum tuberosum HOM05D004929 ORTHO05D006492 3.2e-145 518.8 357 71.7
A03p32440 Brassica napus HOM05D004929 ORTHO05D006492 5.5e-145 518.1 346 71.1
C03p39500 Brassica napus HOM05D004929 ORTHO05D006492 1.6e-144 516.5 346 70.8
EL10Ac6g14097 Beta vulgaris HOM05D004929 ORTHO05D006492 2.1e-144 516.2 343 72.6
HPP92_015407 Vanilla planifolia HOM05D004929 ORTHO05D006492 2.7e-144 515.8 348 72.4
AL6G25200 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 3.5e-144 515.4 345 71.3
Hund23289 Selenicereus undatus HOM05D004929 ORTHO05D006492 3.5e-144 515.4 352 71.9
AT5G14470 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 4.6e-144 515.0 345 71.3
CARHR198840 Cardamine hirsuta HOM05D004929 ORTHO05D006492 6.0e-144 514.6 347 70.6
BolC3t16218H Brassica oleracea HOM05D004929 ORTHO05D006492 7.9e-144 514.2 346 70.5
DCAR_021732 Daucus carota HOM05D004929 ORTHO05D006492 7.9e-144 514.2 323 76.2
Thhalv10013912m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 7.9e-144 514.2 352 68.8
MBI05_g22077_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 7.9e-144 514.2 346 72.8
HanXRQChr17g0548641 Helianthus annuus HOM05D004929 ORTHO05D006492 1.8e-143 513.1 349 71.6
HanXRQChr17g0548651 Helianthus annuus HOM05D004929 ORTHO05D006492 1.8e-143 513.1 345 72.2
Zm00001eb025800 Zea mays HOM05D004929 ORTHO05D006492 2.3e-143 512.7 346 72.0
BraA10t44472Z Brassica rapa HOM05D004929 ORTHO05D006492 9.7e-142 507.3 345 69.9
Ah.03g137000 Amaranthus hybridus HOM05D004929 ORTHO05D006492 1.6e-141 506.5 353 70.8
ECA246G1179 Erigeron canadensis HOM05D004929 ORTHO05D006492 3.7e-141 505.4 349 70.8
AUR62008872 Chenopodium quinoa HOM05D004929 ORTHO05D006492 6.9e-140 501.1 347 70.6
Duzib264G0638 Durio zibethinus HOM05D004929 ORTHO05D006492 2.0e-139 499.6 380 68.4
BcaB08g36997 Brassica carinata HOM05D004929 ORTHO05D006492 2.9e-138 495.7 348 69.0
Os11g0217300 Oryza sativa ssp. japonica HOM05D004929 ORTHO05D006492 3.8e-138 495.4 342 70.2
AUR62031837 Chenopodium quinoa HOM05D004929 ORTHO05D006492 4.6e-136 488.4 387 63.0
BcaC04g19032 Brassica carinata HOM05D004929 ORTHO05D006492 9.7e-134 480.7 347 68.0
ATR0827G043 Amborella trichopoda HOM05D004929 ORTHO05D006492 2.2e-133 479.6 366 66.1
BcaB08g36995 Brassica carinata HOM05D004929 ORTHO05D006492 1.2e-131 473.8 353 66.9
Oeu018151.1 Olea europaea HOM05D004929 ORTHO05D006492 1.4e-129 466.8 349 66.5
SHI00354 Sapria himalayana HOM05D004929 ORTHO05D006492 1.0e-127 460.7 342 66.4
Psat1g053480 Pisum sativum HOM05D004929 ORTHO05D006492 2.3e-127 459.5 269 82.2
Eucgr.I01731 Eucalyptus grandis HOM05D004929 ORTHO05D006492 8.8e-127 457.6 285 76.8
COL.COLO4_29172 Corchorus olitorius HOM05D004929 ORTHO05D006492 6.5e-122 441.4 346 64.7
SMO145G0043 Selaginella moellendorffii HOM05D004929 ORTHO05D006492 2.1e-120 436.4 328 64.3
A10p24090 Brassica napus HOM05D004929 ORTHO05D006492 1.3e-117 427.2 346 60.4
Dinv33427 Davidia involucrata HOM05D004929 ORTHO05D006492 8.2e-117 424.5 268 76.1
SGA_v2.0_scaffold30G12409 Striga asiatica HOM05D004929 ORTHO05D006492 9.1e-116 421.0 268 75.7
HPP92_026990 Vanilla planifolia HOM05D004929 ORTHO05D006492 4.7e-112 408.7 270 73.7
CBR_g3618 Chara braunii HOM05D004929 ORTHO05D006492 6.7e-111 404.8 346 59.0
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 2.0e-110 403.3 276 70.3
Sc03g0007290 Simmondsia chinensis HOM05D004929 ORTHO05D006492 1.3e-109 400.6 268 71.6
Mapoly0023s0058 Marchantia polymorpha HOM05D004929 ORTHO05D006492 1.4e-108 397.1 342 59.6
AagrBONN_evm.TU.Sc2ySwM_228.449 Anthoceros agrestis HOM05D000718 ORTHO05D002712 5.9e-107 391.7 296 63.2
Nitab4.5_0006683g0060 Nicotiana tabacum HOM05D004929 ORTHO05D006492 6.5e-106 388.3 346 58.4
Atru.chr6.2430 Acer truncatum HOM05D004929 ORTHO05D006492 2.2e-101 373.2 236 77.5
Pp3c22_9380 Physcomitrium patens HOM05D004929 ORTHO05D006492 6.3e-101 371.7 269 65.8
ATR0681G379 Amborella trichopoda HOM05D004929 ORTHO05D006492 3.3e-97 359.4 251 71.3
SGA_v2.0_scaffold47G17516 Striga asiatica HOM05D004929 ORTHO05D006492 3.3e-97 359.4 330 57.9
SHI25478 Sapria himalayana HOM05D004929 ORTHO05D006492 6.1e-96 355.1 276 65.2
C09p62710 Brassica napus HOM05D004929 ORTHO05D006492 5.6e-89 332.0 346 51.4
BolC9t59108H Brassica oleracea HOM05D004929 ORTHO05D006492 2.8e-88 329.7 355 50.7
CDE07G0337 Ceratophyllum demersum HOM05D004929 ORTHO05D006492 4.0e-87 325.9 210 73.8
Cre02.g107600 Chlamydomonas reinhardtii HOM05D004929 ORTHO05D006492 5.2e-87 325.5 350 50.3
MCO09G795 Micromonas commoda HOM05D004929 ORTHO05D006492 7.8e-83 311.6 356 47.2
Nitab4.5_0000040g0670 Nicotiana tabacum HOM05D004929 ORTHO05D006492 1.0e-82 311.2 350 50.6
PRCOL_00005101 Prasinoderma coloniale HOM05D004929 ORTHO05D006492 2.3e-79 300.1 342 48.5
Nitab4.5_0001550g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 4.9e-69 265.8 233 60.9
Oeu033729.3 Olea europaea HOM05D004929 ORTHO05D006492 4.7e-64 249.2 212 62.7
BcaB08g36982 Brassica carinata HOM05D004929 ORTHO05D006492 7.6e-62 241.9 166 69.3
MBI05_g01825_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 2.5e-57 226.9 216 56.5
BolC9t59344H Brassica oleracea HOM05D004929 ORTHO05D006492 7.8e-51 205.3 194 55.7
MSTRG.3285 Avicennia marina HOM05D004929 ORTHO05D006492 2.5e-49 200.3 131 73.3
Atru.chr6.2429 Acer truncatum HOM05D004929 ORTHO05D006492 4.3e-41 172.9 114 73.7
CDE07G1161 Ceratophyllum demersum HOM05D004929 ORTHO05D043891 8.2e-32 142.1 116 61.2
A10p26090 Brassica napus HOM05D004929 ORTHO05D006492 1.3e-24 118.2 187 40.1
BcaNung06761 Brassica carinata HOM05D004929 ORTHO05D006492 3.4e-22 110.2 70 71.4
MD17G1022500 Malus domestica HOM05D004929 ORTHO05D006492 2.0e-17 94.4 66 69.7
Sp6g29550 Schrenkiella parvula HOM05D004929 ORTHO05D043891 2.0e-17 94.4 64 68.8
Sopen02g038030 Solanum pennellii HOM05D004929 ORTHO05D006492 8.2e-16 89.0 63 65.1
Glyma.19G002700 Glycine max HOM05D004929 ORTHO05D215243 3.1e-15 87.0 85 58.8
arahy.Tifrunner.gnm1.ann1.6CI6DX Arachis hypogaea HOM05D004929 ORTHO05D031499 4.7e-11 73.2 44 72.7
arahy.Tifrunner.gnm1.ann1.XQCE19 Arachis hypogaea HOM05D004929 ORTHO05D031499 8.8e-10 68.9 43 67.4
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 2.6e-06 57.4 233 23.2
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 4.5e-06 56.6 241 23.2


User provided reference genes

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