Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0464G1105 Vigna mungo HOM05D002270 ORTHO05D002866 1.3e-301 1038.9 518 100.0
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 8.3e-211 737.3 470 82.8
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 2.6e-180 636.0 466 72.5
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 8.7e-176 620.9 467 71.9
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 1.1e-175 620.5 465 70.1
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.9e-170 603.2 470 67.4
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 4.2e-162 575.5 463 66.5
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 1.8e-160 570.1 470 65.5
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 5.1e-160 568.5 463 63.9
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 5.1e-160 568.5 465 63.4
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.6e-156 556.2 463 63.9
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 2.0e-124 450.3 468 52.6
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 2.0e-124 450.3 465 51.8
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 1.1e-122 444.5 465 51.6
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 2.1e-121 440.3 468 50.9
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 2.7e-121 439.9 464 49.8
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 1.0e-120 438.0 466 51.1
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 2.0e-116 423.7 469 47.8
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.0e-115 421.4 464 48.1
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.7e-115 420.6 469 47.5
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 2.2e-115 420.2 464 47.4
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 1.5e-114 417.5 472 47.2
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 2.5e-114 416.8 463 48.8
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 5.5e-114 415.6 465 47.1
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 2.1e-113 413.7 467 46.0
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 4.7e-113 412.5 436 55.3
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 2.6e-111 406.8 460 47.2
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 8.3e-110 401.7 462 48.1
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.8e-109 400.6 498 45.0
vmacro22216 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 4.1e-109 399.4 463 47.5
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 5.4e-109 399.1 467 46.9
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 7.0e-109 398.7 458 48.0
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 9.1e-109 398.3 474 46.8
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 2.0e-108 397.1 464 48.1
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 1.0e-107 394.8 488 46.3
Cpa.g.sc30.6 Carica papaya HOM05D002270 ORTHO05D002866 2.9e-107 393.3 465 46.7
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.5e-106 391.0 474 46.6
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 8.0e-105 385.2 474 47.5
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 1.0e-104 384.8 475 43.8
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 1.4e-104 384.4 464 45.5
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 2.3e-104 383.6 474 45.6
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 4.4e-103 379.4 465 45.8
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 9.8e-103 378.3 468 42.9
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.3e-102 377.9 466 45.7
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.1e-101 374.8 472 43.6
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 3.1e-101 373.2 465 43.4
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 7.0e-101 372.1 408 49.8
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 1.3e-99 367.9 482 42.5
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 5.6e-98 362.5 463 42.3
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 1.2e-97 361.3 470 41.3
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 6.1e-97 359.0 467 44.5
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.4e-96 357.8 467 42.8
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 5.2e-96 355.9 467 43.7
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 6.8e-96 355.5 503 40.0
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 2.0e-95 354.0 465 42.2
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 5.7e-95 352.4 475 41.3
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 1.3e-94 351.3 464 41.8
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 2.2e-94 350.5 465 40.9
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 2.9e-94 350.1 465 41.1
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 4.9e-94 349.4 467 42.2
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 8.3e-94 348.6 484 39.9
TAR636G2809 Trochodendron aralioides HOM05D002270 ORTHO05D002866 1.8e-93 347.4 362 50.3
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 5.4e-93 345.9 468 41.0
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 9.2e-93 345.1 485 41.4
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 9.2e-93 345.1 475 41.5
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 1.2e-92 344.7 465 41.1
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 1.2e-92 344.7 461 41.6
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 3.5e-92 343.2 496 39.3
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 7.8e-92 342.0 469 42.2
QL01p054541 Quercus lobata HOM05D002270 ORTHO05D002866 1.3e-91 341.3 456 45.2
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 3.9e-91 339.7 470 39.8
TPR.G29949 Trifolium pratense HOM05D002270 ORTHO05D002866 1.9e-90 337.4 470 46.0
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 7.3e-90 335.5 467 40.7
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 9.5e-90 335.1 471 38.2
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 2.1e-89 334.0 487 39.4
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 2.8e-89 333.6 470 40.9
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 3.6e-89 333.2 465 39.6
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 6.2e-89 332.4 465 39.4
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 8.0e-89 332.0 465 39.4
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 8.0e-89 332.0 472 39.8
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 2.3e-88 330.5 470 39.1
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 2.9e-86 323.6 533 37.7
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 3.7e-86 323.2 470 39.6
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 6.6e-83 312.4 473 37.4
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 8.6e-83 312.0 476 39.7
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 6.2e-81 305.8 469 39.9
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 5.2e-80 302.8 473 37.4
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 2.0e-79 300.8 467 38.5
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.3e-78 298.1 467 37.3
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 2.9e-78 297.0 422 40.8
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 1.1e-77 295.0 478 38.3
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 6.6e-75 285.8 471 36.1
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 9.5e-74 282.0 458 37.1
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 8.4e-70 268.9 464 35.1
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 3.5e-68 263.5 458 34.1
BcaNung06980 Brassica carinata HOM05D002270 ORTHO05D002866 4.3e-66 256.5 398 36.4
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 2.8e-65 253.8 471 34.6
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 2.0e-63 247.7 452 35.0
SEGI_33198 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 2.1e-60 237.7 474 35.0
SEGI_22741 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 3.5e-60 236.9 472 35.2
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 4.3e-58 229.9 456 32.2
SHI16816 Sapria himalayana HOM05D002270 ORTHO05D002866 3.0e-51 207.2 402 37.8
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 5.1e-51 206.5 469 30.9
Ah.08g216550 Amaranthus hybridus HOM05D002270 ORTHO05D002866 9.3e-45 185.7 491 27.1
C05p38590 Brassica napus HOM05D002270 ORTHO05D002866 1.8e-40 171.4 460 28.0
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 3.2e-37 160.6 488 26.8
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 1.0e-35 155.6 512 24.8
CBR_g741 Chara braunii HOM05D002270 ORTHO05D002866 2.4e-32 144.4 524 24.0
Aqoxy6G02935 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 3.4e-31 140.6 155 48.4
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 4.5e-31 140.2 496 25.2
ECA067G0001 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.3e-30 138.7 280 32.9
COL.COLO4_12566 Corchorus olitorius HOM05D002270 ORTHO05D002866 7.2e-29 132.9 112 55.4
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 2.2e-22 111.3 165 40.6
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 6.1e-20 103.2 251 29.5
QL03p018747 Quercus lobata HOM05D002270 ORTHO05D002866 2.8e-17 94.4 152 41.4
COL.COLO4_30772 Corchorus olitorius HOM05D002270 ORTHO05D002866 3.7e-17 94.0 186 36.0
COL.COLO4_12567 Corchorus olitorius HOM05D002270 ORTHO05D044752 1.4e-16 92.0 148 34.5
COL.COLO4_16853 Corchorus olitorius HOM05D000629 ORTHO05D016154 1.4e-16 92.0 245 26.9
BolC5t32597H Brassica oleracea HOM05D002270 ORTHO05D002866 2.6e-15 87.8 79 53.2
COL.COLO4_26664 Corchorus olitorius HOM05D002270 ORTHO05D011956 1.7e-14 85.1 74 54.1
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 3.6e-12 77.4 154 36.4
Lsat_1_v5_gn_4_95801 Lactuca sativa HOM05D000640 ORTHO05D229177 1.5e-10 72.0 87 41.4
Lsat_1_v5_gn_8_57560 Lactuca sativa HOM05D002270 ORTHO05D044752 1.5e-10 72.0 137 30.7
PRCOL_00003697 Prasinoderma coloniale HOM05D002270 ORTHO05D002866 1.5e-10 72.0 130 30.0
Psat1g148840 Pisum sativum HOM05D002270 ORTHO05D012184 2.8e-09 67.8 49 69.4
SHI16817 Sapria himalayana HOM05D002270 ORTHO05D002866 8.2e-09 66.2 64 43.8
TAR636G1145 Trochodendron aralioides HOM05D002270 ORTHO05D002866 3.1e-08 64.3 42 71.4
VMungo0720G2346 Vigna mungo HOM05D001127 ORTHO05D002230 5.9e-07 60.1 60 51.7


User provided reference genes

Program Settings