Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 0.0e+00 1275.4 690 100.0
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 5.8e-228 794.7 567 79.7
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 6.9e-221 771.2 692 67.8
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 2.0e-95 354.4 901 36.7
Ca_12179_v3 Cicer arietinum L. HOM05D006920 ORTHO05D005895 4.6e-92 343.2 881 35.2
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 2.5e-90 337.4 916 35.0
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 2.5e-85 320.9 801 36.7
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 4.7e-84 316.6 833 35.8
Glyma.18G092000 Glycine max HOM05D006920 ORTHO05D005895 7.9e-84 315.8 306 60.1
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 1.5e-74 285.0 762 35.8
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 1.8e-72 278.1 703 40.1
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 5.9e-71 273.1 389 55.3
Medtr3g053340 Medicago truncatula HOM05D006920 ORTHO05D005895 1.2e-66 258.8 830 32.9
Glyma.08G320300 Glycine max HOM05D006920 ORTHO05D005895 1.4e-64 251.9 191 70.7
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 1.6e-63 248.4 701 36.9
Glyma.02G244050 Glycine max HOM05D006920 ORTHO05D005895 1.3e-46 192.2 339 40.1
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 4.3e-45 187.2 729 31.6
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 1.9e-37 161.8 572 34.6
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 3.1e-35 154.5 617 34.4
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 2.6e-34 151.4 886 29.1
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 7.5e-34 149.8 573 34.0
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 3.7e-33 147.5 619 34.1
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 1.9e-32 145.2 882 29.9
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 5.4e-32 143.7 817 27.9
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 7.1e-32 143.3 912 28.4
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 7.1e-32 143.3 440 38.4
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 1.2e-31 142.5 614 33.1
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 1.1e-29 136.0 617 32.3
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 3.3e-29 134.4 612 29.4
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 4.3e-29 134.0 602 28.7
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 4.3e-29 134.0 628 31.7
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 7.3e-29 133.3 629 31.3
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 9.5e-29 132.9 864 28.0
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 3.6e-28 131.0 420 37.6
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 1.1e-27 129.4 384 35.2
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.1e-27 129.4 367 39.0
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 1.4e-27 129.0 483 35.2
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.3e-27 128.3 381 38.6
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.3e-27 128.3 381 38.6
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 3.1e-27 127.9 790 29.9
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 1.2e-26 125.9 882 26.9
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 1.2e-26 125.9 440 35.0
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 7.6e-26 123.2 723 30.2
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 7.6e-26 123.2 468 34.6
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 7.6e-26 123.2 367 37.9
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 2.2e-25 121.7 399 31.6
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 2.9e-25 121.3 621 30.9
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 4.9e-25 120.6 588 31.3
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 4.9e-25 120.6 717 29.0
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 1.4e-24 119.0 771 29.6
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 5.4e-24 117.1 754 26.3
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 5.4e-24 117.1 547 32.9
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 7.1e-24 116.7 395 36.7
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 1.6e-23 115.5 867 27.9
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 2.1e-23 115.2 429 36.8
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 6.0e-23 113.6 501 33.1
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 3.9e-22 110.9 589 30.6
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 5.1e-22 110.5 478 33.1
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 5.1e-22 110.5 453 34.4
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 1.5e-21 109.0 452 31.6
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 1.5e-21 109.0 436 34.6
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 3.3e-21 107.8 293 40.6
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 9.6e-21 106.3 647 30.6
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 1.2e-20 105.9 414 35.3
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 2.8e-20 104.8 654 24.8
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 3.6e-20 104.4 473 32.6
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 4.7e-20 104.0 529 30.4
Lj3g0018977 Lotus japonicus HOM05D006920 ORTHO05D005895 6.9e-19 100.1 127 42.5
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 8.9e-19 99.8 290 38.3
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 1.2e-18 99.4 568 28.7
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 4.4e-18 97.4 431 29.2
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 4.4e-18 97.4 895 27.7
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 7.6e-18 96.7 547 28.9
arahy.Tifrunner.gnm1.ann1.J1TK4W Arachis hypogaea HOM05D006920 ORTHO05D005895 1.3e-17 95.9 580 24.5
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 4.9e-17 94.0 257 32.7
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 1.9e-16 92.0 732 29.0
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 2.4e-16 91.7 437 32.5
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 3.2e-16 91.3 734 28.7
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 5.4e-16 90.5 420 35.0
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 7.1e-16 90.1 605 25.0
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 7.1e-16 90.1 275 38.9
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 2.1e-15 88.6 657 22.8
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 2.7e-15 88.2 225 43.1
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 3.5e-15 87.8 592 25.5
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 3.5e-15 87.8 456 32.7
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 6.0e-15 87.0 379 25.3
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 6.0e-15 87.0 376 35.9
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 6.0e-15 87.0 327 30.9
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 1.3e-14 85.9 207 43.0
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 1.7e-14 85.5 643 26.1
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 2.3e-14 85.1 210 46.7
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 2.3e-14 85.1 733 24.6
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 3.9e-14 84.3 843 24.6
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 6.6e-14 83.6 500 27.6
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 1.9e-13 82.0 496 25.0
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 1.9e-13 82.0 435 31.5
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 3.3e-13 81.3 685 24.7
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 3.3e-13 81.3 256 34.8
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 1.6e-12 79.0 71 60.6
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 3.6e-12 77.8 593 25.0
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 6.2e-12 77.0 673 23.9
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 8.1e-12 76.6 605 23.6
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 8.1e-12 76.6 605 23.6
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 8.1e-12 76.6 605 23.6
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 4.0e-11 74.3 193 42.0
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 6.9e-11 73.6 741 27.8
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 9.0e-11 73.2 68 54.4
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 2.0e-10 72.0 58 60.3
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 2.0e-10 72.0 235 40.4
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 3.4e-10 71.2 382 27.2
arahy.Tifrunner.gnm1.ann1.Y2Z108 Arachis hypogaea HOM05D006920 ORTHO05D005895 1.3e-09 69.3 185 35.7
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 4.9e-09 67.4 580 26.6
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 8.4e-09 66.6 444 30.2
Pp3c19_22680 Physcomitrium patens HOM05D006920 ORTHO05D005895 1.1e-08 66.2 94 63.8
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 1.4e-08 65.9 282 31.2
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 1.9e-08 65.5 432 30.1
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 5.4e-08 63.9 110 56.4
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 1.6e-07 62.4 509 25.7
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 7.9e-07 60.1 134 43.3
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 1.3e-06 59.3 56 48.2
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.8e-06 58.9 451 23.9
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 1.8e-06 58.9 113 53.1


User provided reference genes

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