Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G1641 Vigna mungo HOM05D006287 ORTHO05D008192 1.5e-137 494.6 466 100.0
Phvul.009G090400 Phaseolus vulgaris HOM05D006287 ORTHO05D008192 1.1e-92 345.5 466 84.1
Glyma.07G068500 Glycine max HOM05D006287 ORTHO05D008192 1.8e-69 268.5 463 78.8
Ca_26550_v3 Cicer arietinum L. HOM05D006287 ORTHO05D008192 1.7e-51 208.8 189 58.2
Psat7g237040 Pisum sativum HOM05D006287 ORTHO05D008192 4.1e-50 204.1 192 56.2
TPR.G5606 Trifolium pratense HOM05D006287 ORTHO05D008192 5.3e-50 203.8 201 53.7
Medtr4g076540 Medicago truncatula HOM05D006287 ORTHO05D008192 5.0e-48 197.2 190 56.3
arahy.Tifrunner.gnm1.ann1.VPFI8Q Arachis hypogaea HOM05D006287 ORTHO05D008192 1.6e-46 192.2 182 58.8
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 2.3e-45 188.3 181 58.0
Lalb_Chr07g0185941 Lupinus albus HOM05D006287 ORTHO05D008192 3.0e-45 188.0 193 54.9
LjContig00081g0002723 Lotus japonicus HOM05D006287 ORTHO05D008192 8.8e-45 186.4 136 64.7
Haze_21571 Corylus avellana HOM05D006287 ORTHO05D008192 2.4e-42 178.3 208 45.2
Thecc.09G149000 Theobroma cacao HOM05D006287 ORTHO05D008192 6.5e-40 170.2 162 49.4
CiPaw.06G059600 Carya illinoinensis HOM05D006287 ORTHO05D008192 1.5e-39 169.1 221 43.9
CSS0048694 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 3.2e-39 167.9 208 45.2
GSVIVG01035807001 Vitis vinifera HOM05D006287 ORTHO05D008192 9.5e-39 166.4 189 48.7
QL05p049822 Quercus lobata HOM05D006287 ORTHO05D008192 8.8e-37 159.8 135 56.3
CANSAT11G2472 Cannabis sativa HOM05D006287 ORTHO05D008192 2.0e-36 158.7 134 56.0
Prupe.6G275900 Prunus persica HOM05D006287 ORTHO05D008192 2.6e-36 158.3 214 43.0
Cpa.g.sc1.269 Carica papaya HOM05D006287 ORTHO05D008192 1.7e-35 155.6 192 44.8
QL08p000602 Quercus lobata HOM05D006287 ORTHO05D008192 1.7e-35 155.6 198 44.4
Oeu032501.2 Olea europaea HOM05D006287 ORTHO05D008192 8.3e-35 153.3 154 50.6
CSS0042508 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 2.4e-34 151.8 230 40.0
Ciclev10010816m.g Citrus clementina HOM05D006287 ORTHO05D008192 5.4e-34 150.6 185 42.2
Oeu008766.1 Olea europaea HOM05D006287 ORTHO05D008192 5.4e-34 150.6 238 37.8
MSTRG.25851 Avicennia marina HOM05D006287 ORTHO05D008192 2.7e-33 148.3 159 45.9
Duzib168G0154 Durio zibethinus HOM05D006287 ORTHO05D008192 5.9e-33 147.1 176 43.2
Atru.chr7.2375 Acer truncatum HOM05D006287 ORTHO05D008192 1.0e-32 146.4 224 38.4
Hma1.2p1_0007F.1_g005110 Hydrangea macrophylla HOM05D006287 ORTHO05D008192 3.8e-32 144.4 210 39.5
Actinidia15687 Actinidia chinensis HOM05D006287 ORTHO05D008192 9.5e-31 139.8 185 43.8
Cc11_g01810 Coffea canephora HOM05D006287 ORTHO05D008192 1.2e-30 139.4 191 41.4
Duzib150G0458 Durio zibethinus HOM05D006287 ORTHO05D008192 2.1e-30 138.7 134 47.8
Dinv11617 Davidia involucrata HOM05D006287 ORTHO05D008192 3.6e-30 137.9 194 44.3
PGR142G2973 Punica granatum HOM05D006287 ORTHO05D008192 2.3e-29 135.2 180 36.7
COL.COLO4_23984 Corchorus olitorius HOM05D006287 ORTHO05D008192 3.0e-29 134.8 120 51.7
RcHm_v2.0_Chr7g0216391 Rosa chinensis HOM05D006287 ORTHO05D008192 4.0e-29 134.4 162 45.7
THA.LOC104824237 Tarenaya hassleriana HOM05D006287 ORTHO05D008192 8.9e-29 133.3 178 39.9
CAN.G98.23 Capsicum annuum HOM05D006287 ORTHO05D008192 1.5e-28 132.5 158 41.1
TWI63G1321 Tripterygium wilfordii HOM05D006287 ORTHO05D008192 1.5e-28 132.5 158 43.0
Gorai.011G097400 Gossypium raimondii HOM05D006287 ORTHO05D008192 2.2e-27 128.6 157 40.8
Nitab4.5_0001669g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 2.2e-27 128.6 163 40.5
Sabra06G0196000 Salix brachista HOM05D001686 ORTHO05D008192 6.4e-27 127.1 182 40.1
Nn5g27729 Nelumbo nucifera HOM05D006287 ORTHO05D008192 8.3e-27 126.7 157 42.0
Potri.006G250700 Populus trichocarpa HOM05D006287 ORTHO05D008192 1.8e-26 125.6 178 41.6
MSTRG.11775 Avicennia marina HOM05D006287 ORTHO05D008192 3.2e-26 124.8 223 35.9
Nitab4.5_0000151g0190 Nicotiana tabacum HOM05D006287 ORTHO05D008192 4.1e-26 124.4 203 36.0
MD04G1151000 Malus domestica HOM05D006287 ORTHO05D008192 1.6e-25 122.5 357 70.6
FvH4_5g25890 Fragaria vesca HOM05D006287 ORTHO05D008192 2.0e-25 122.1 158 45.6
FAN18G3351 Fragaria x ananassa HOM05D006287 ORTHO05D008192 2.0e-25 122.1 158 45.6
Sed0018262 Sechium edule HOM05D006287 ORTHO05D008192 2.0e-25 122.1 199 34.2
Nn3g20345 Nelumbo nucifera HOM05D006287 ORTHO05D008192 3.5e-25 121.3 183 38.8
SGA_v2.0_scaffold22G09931 Striga asiatica HOM05D006287 ORTHO05D008192 3.5e-25 121.3 180 34.4
PGSC0003DMG400023145 Solanum tuberosum HOM05D006287 ORTHO05D008192 1.7e-24 119.0 163 36.8
Solyc08g067060.2 Solanum lycopersicum HOM05D006287 ORTHO05D008192 2.3e-24 118.6 163 36.2
ClCG02G013330 Citrullus lanatus HOM05D006287 ORTHO05D008192 3.0e-24 118.2 126 45.2
Sopen08g021010 Solanum pennellii HOM05D006287 ORTHO05D008192 3.0e-24 118.2 163 36.2
Aa31sc33G30 Aethionema arabicum HOM05D006287 ORTHO05D008192 6.6e-24 117.1 160 35.6
A09p47970 Brassica napus HOM05D006287 ORTHO05D008192 1.5e-23 115.9 197 37.1
CARHR164980 Cardamine hirsuta HOM05D006287 ORTHO05D008192 5.6e-23 114.0 189 37.0
Sed0001816 Sechium edule HOM05D006287 ORTHO05D008192 2.1e-22 112.1 131 42.7
Peaxi162Scf00341g00062 Petunia axillaris HOM05D006287 ORTHO05D008192 3.6e-22 111.3 133 42.1
AL5G36090 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 1.4e-21 109.4 194 36.6
Eucgr.I01690 Eucalyptus grandis HOM05D006287 ORTHO05D008192 1.8e-21 109.0 182 36.8
Hund04746 Selenicereus undatus HOM05D006287 ORTHO05D008192 3.1e-21 108.2 136 39.7
BraA09t40252Z Brassica rapa HOM05D006287 ORTHO05D008192 4.0e-21 107.8 193 36.3
Sp4g21560 Schrenkiella parvula HOM05D006287 ORTHO05D008192 4.0e-21 107.8 220 33.6
SpUn0018_0110 Schrenkiella parvula HOM05D006287 ORTHO05D008192 4.0e-21 107.8 220 33.6
AT2G39230 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 5.2e-21 107.5 219 33.8
MD12G1164900 Malus domestica HOM05D006287 ORTHO05D008192 1.2e-20 106.3 114 50.0
Lj7C718G17 Lonicera japonica HOM05D006287 ORTHO05D008192 2.0e-20 105.5 190 37.4
AT3G54980 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 2.6e-20 105.1 192 34.4
BcaB01g00140 Brassica carinata HOM05D006287 ORTHO05D008192 3.4e-20 104.8 190 35.8
Thhalv10017602m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 3.4e-20 104.8 198 35.4
Thhalv10010921m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 5.8e-20 104.0 170 37.6
MELO3C020947.2 Cucumis melo HOM05D006287 ORTHO05D008192 7.5e-20 103.6 127 43.3
CDE03G0083 Ceratophyllum demersum HOM05D006287 ORTHO05D008192 2.9e-19 101.7 204 29.4
CsaV3_2G017510 Cucumis sativus L. HOM05D006287 ORTHO05D008192 2.9e-19 101.7 126 41.3
Sc25g0000480 Simmondsia chinensis HOM05D006287 ORTHO05D008192 2.9e-19 101.7 204 31.9
Carub.0005s2160 Capsella rubella HOM05D006287 ORTHO05D008192 1.4e-18 99.4 152 38.8
BolC8t50627H Brassica oleracea HOM05D006287 ORTHO05D008192 1.9e-18 99.0 206 34.5
Carub.0004s2128 Capsella rubella HOM05D006287 ORTHO05D008192 5.4e-18 97.4 182 36.3
BcaNung04649 Brassica carinata HOM05D006287 ORTHO05D008192 1.2e-17 96.3 198 34.8
C08p30210 Brassica napus HOM05D006287 ORTHO05D008192 1.2e-17 96.3 198 34.8
DCAR_006447 Daucus carota HOM05D006287 ORTHO05D008192 1.6e-17 95.9 200 31.5
AL4G36540 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 4.6e-17 94.4 181 35.4
Nitab4.5_0008089g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 7.8e-17 93.6 107 40.2
MBI08_g04815_MAGBIO Magnolia biondii HOM05D006287 ORTHO05D008192 1.3e-16 92.8 138 37.7
THA.LOC104809984 Tarenaya hassleriana HOM05D006287 ORTHO05D008192 1.7e-16 92.4 132 35.6
AUR62015978 Chenopodium quinoa HOM05D006287 ORTHO05D008192 3.9e-16 91.3 219 31.1
Ah.13g068920 Amaranthus hybridus HOM05D006287 ORTHO05D008192 5.0e-16 90.9 172 33.1
Aqoxy7G02057 Aquilegia oxysepala HOM05D006287 ORTHO05D008192 5.0e-16 90.9 157 30.6
Lsat_1_v5_gn_6_22161 Lactuca sativa HOM05D006287 ORTHO05D008192 5.0e-16 90.9 209 34.0
ATR0782G042 Amborella trichopoda HOM05D006287 ORTHO05D008192 3.3e-15 88.2 161 28.6
ATR0782G035 Amborella trichopoda HOM05D006287 ORTHO05D008192 1.6e-14 85.9 133 33.1
AUR62021186 Chenopodium quinoa HOM05D006287 ORTHO05D008192 3.6e-14 84.7 142 35.2
HanXRQChr02g0050751 Helianthus annuus HOM05D006287 ORTHO05D008192 1.1e-13 83.2 182 33.0
HPP92_023171 Vanilla planifolia HOM05D006287 ORTHO05D008192 3.1e-13 81.6 201 30.8
CAN.G1030.29 Capsicum annuum HOM05D006287 ORTHO05D008192 6.8e-13 80.5 90 38.9
RcHm_v2.0_Chr4g0410561 Rosa chinensis HOM05D006287 ORTHO05D008192 2.6e-12 78.6 116 40.5
RcHm_v2.0_Chr6g0264781 Rosa chinensis HOM05D006287 ORTHO05D008192 5.8e-12 77.4 108 37.0
DCAR_006446 Daucus carota HOM05D006287 ORTHO05D008192 9.2e-10 70.1 151 31.1
AUR62015977 Chenopodium quinoa HOM05D006287 ORTHO05D008192 2.7e-09 68.6 223 24.2
FAN08G1130 Fragaria x ananassa HOM05D006287 ORTHO05D008192 3.5e-09 68.2 61 52.5
Oeu030203.1 Olea europaea HOM05D006287 ORTHO05D000003 4.6e-09 67.8 61 49.2
BcaNung04644 Brassica carinata HOM05D006287 ORTHO05D008192 6.0e-09 67.4 148 36.5
AUR62021185 Chenopodium quinoa HOM05D006287 ORTHO05D008192 7.8e-09 67.0 213 26.3
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 3.0e-08 65.1 160 26.9
RcHm_v2.0_Chr2g0173011 Rosa chinensis HOM05D007358 ORTHO05D009117 3.9e-08 64.7 148 33.1
COL.COLO4_29095 Corchorus olitorius HOM05D007358 ORTHO05D009117 2.5e-07 62.0 197 29.4
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 9.5e-07 60.1 53 47.2
Gohir.A10G099700 Gossypium hirsutum HOM05D006287 ORTHO05D008192 1.6e-06 59.3 47 57.4
Lsat_1_v5_gn_3_20581 Lactuca sativa HOM05D007358 ORTHO05D009117 1.6e-06 59.3 193 30.1
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 1.6e-06 59.3 203 26.6
GSVIVG01008360001 Vitis vinifera HOM05D007358 ORTHO05D009117 2.1e-06 58.9 151 27.8
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 2.8e-06 58.5 158 28.5
AUR62009526 Chenopodium quinoa HOM05D005764 ORTHO05D006600 2.8e-06 58.5 164 25.6
Glyma.12G191600 Glycine max HOM05D000104 ORTHO05D009920 2.8e-06 58.5 155 29.0
SEGI_04891 Sequoiadendron giganteum HOM05D006888 ORTHO05D008371 3.6e-06 58.2 154 25.3
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 6.2e-06 57.4 145 28.3
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 6.2e-06 57.4 145 28.3
Gohir.D10G088500 Gossypium hirsutum HOM05D006287 ORTHO05D008192 6.2e-06 57.4 44 59.1
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 8.1e-06 57.0 217 24.4


User provided reference genes

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