Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 4.5e-217 757.7 391 100.0
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 2.4e-114 416.4 241 91.3
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 4.3e-111 405.6 241 88.4
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 3.0e-104 382.9 240 85.0
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 4.6e-97 359.0 244 78.7
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 5.1e-96 355.5 243 78.2
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 6.7e-96 355.1 243 78.2
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 3.3e-95 352.8 248 78.6
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.6e-94 350.5 249 77.1
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 1.2e-89 334.3 230 76.5
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 4.6e-89 332.4 249 73.1
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 7.9e-89 331.6 230 75.7
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 3.0e-88 329.7 230 75.2
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 7.2e-82 308.5 232 69.0
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 9.4e-82 308.1 232 69.8
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 1.4e-80 304.3 245 66.9
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.1e-79 301.2 223 68.6
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 1.5e-79 300.8 229 67.2
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 2.6e-79 300.1 229 68.6
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 7.4e-79 298.5 227 69.2
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.3e-78 297.7 246 65.0
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 1.7e-78 297.4 230 65.7
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 3.7e-78 296.2 229 69.9
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 4.8e-78 295.8 229 66.8
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 6.3e-78 295.4 243 64.2
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.8e-77 293.9 227 68.3
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 2.4e-77 293.5 232 65.1
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 9.1e-77 291.6 230 67.4
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.2e-76 291.2 231 65.8
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 2.0e-76 290.4 231 65.8
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 2.6e-76 290.0 230 69.1
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 3.5e-76 289.7 230 67.0
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 4.5e-76 289.3 225 69.3
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 7.7e-76 288.5 228 66.2
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.0e-75 288.1 231 64.9
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 1.3e-75 287.7 231 64.9
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 1.3e-75 287.7 243 63.4
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 2.9e-75 286.6 229 66.4
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 3.8e-75 286.2 247 63.2
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 8.5e-75 285.0 230 66.1
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 1.9e-74 283.9 244 61.1
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 7.2e-74 282.0 230 65.2
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 7.2e-74 282.0 229 64.2
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 9.4e-74 281.6 229 64.6
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 9.4e-74 281.6 231 66.2
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 6.1e-73 278.9 227 64.3
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 8.0e-73 278.5 234 66.7
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 1.4e-72 277.7 228 64.5
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 1.1e-71 274.6 228 64.0
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 4.4e-71 272.7 228 61.8
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 5.7e-71 272.3 246 60.6
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 5.7e-71 272.3 229 65.1
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 7.5e-71 271.9 234 63.2
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 1.7e-70 270.8 228 61.4
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 3.7e-70 269.6 234 62.4
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 4.8e-70 269.2 228 62.7
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 4.8e-70 269.2 233 64.8
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.4e-69 267.7 231 61.5
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 1.8e-69 267.3 227 64.8
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 9.1e-69 265.0 224 64.3
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 9.1e-69 265.0 220 64.1
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 1.2e-68 264.6 228 63.6
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 2.7e-68 263.5 220 65.5
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 2.7e-68 263.5 231 63.2
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 4.5e-68 262.7 219 65.3
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 5.9e-68 262.3 250 56.4
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 5.9e-68 262.3 253 56.5
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 5.9e-68 262.3 228 63.2
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 1.0e-67 261.5 229 62.0
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 1.0e-67 261.5 229 62.0
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 1.3e-67 261.2 227 61.2
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 1.7e-67 260.8 231 62.8
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 5.0e-67 259.2 224 61.6
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 5.0e-67 259.2 227 64.3
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 6.5e-67 258.8 228 61.8
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 1.5e-66 257.7 214 65.0
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 2.5e-66 256.9 219 62.1
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 3.2e-66 256.5 219 62.1
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 4.2e-66 256.1 252 54.8
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 5.5e-66 255.8 237 58.2
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 9.4e-66 255.0 250 54.4
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 1.6e-65 254.2 253 54.9
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 2.7e-65 253.4 231 58.4
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 6.1e-65 252.3 227 57.7
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 1.4e-64 251.1 253 53.4
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 1.8e-64 250.8 232 60.3
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 3.0e-64 250.0 244 56.1
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 4.0e-64 249.6 234 59.0
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 5.2e-64 249.2 245 55.1
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 8.8e-64 248.4 244 54.9
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 3.7e-62 243.0 228 58.3
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 1.8e-61 240.7 213 61.0
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.8e-61 240.7 181 67.4
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 2.4e-61 240.4 235 58.3
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 3.1e-61 240.0 247 53.8
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 3.1e-61 240.0 247 53.8
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 9.1e-61 238.4 253 53.0
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.2e-60 238.0 229 56.8
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 4.5e-60 236.1 243 52.7
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 1.7e-59 234.2 253 52.6
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 1.7e-59 234.2 235 57.9
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 5.0e-59 232.6 240 55.8
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 6.5e-59 232.3 244 52.5
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 1.0e-56 224.9 254 51.6
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 2.4e-53 213.8 244 50.0
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 9.2e-53 211.8 245 48.6
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 2.7e-52 210.3 199 59.3
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 3.5e-52 209.9 243 49.0
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 1.0e-51 208.4 232 50.9
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 1.3e-51 208.0 243 48.6
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 1.3e-51 208.0 243 48.6
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 7.5e-47 192.2 132 75.0
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 3.9e-43 179.9 198 52.5
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 8.6e-43 178.7 160 59.4
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 4.3e-34 149.8 122 59.0
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 6.2e-33 146.0 132 60.6
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 4.9e-30 136.3 230 41.3
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 3.3e-26 123.6 124 57.3
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 2.9e-22 110.5 79 70.9
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 3.8e-22 110.2 223 34.1
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 1.1e-21 108.6 192 38.5
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 3.2e-21 107.1 74 75.7
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 1.6e-17 94.7 86 54.7
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 2.1e-17 94.4 125 47.2
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 2.0e-15 87.8 153 40.5
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 3.4e-15 87.0 81 53.1
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 5.8e-15 86.3 62 64.5
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 4.2e-13 80.1 115 44.3
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 3.8e-06 57.0 68 44.1


User provided reference genes

Program Settings