Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0375 Vigna mungo HOM05D000165 ORTHO05D026217 7.5e-132 473.8 228 100.0
VMungo0331G0450 Vigna mungo HOM05D000165 ORTHO05D026217 7.0e-37 158.3 252 43.3
VMungo0647G1782 Vigna mungo HOM05D000165 ORTHO05D001328 2.9e-30 136.3 214 42.1
VMungo0647G1250 Vigna mungo HOM05D000165 ORTHO05D001328 3.5e-28 129.4 253 36.4
VMungo0647G0852 Vigna mungo HOM05D000165 ORTHO05D001328 2.4e-21 106.7 258 32.9
Phvul.008G271500 Phaseolus vulgaris HOM05D000165 ORTHO05D001328 1.4e-16 90.9 291 28.2
Phvul.008G271800 Phaseolus vulgaris HOM05D000165 ORTHO05D001328 5.2e-16 89.0 93 49.5
Phvul.008G271600 Phaseolus vulgaris HOM05D000165 ORTHO05D001328 2.6e-15 86.7 94 48.9
VMungo0647G0348 Vigna mungo HOM05D000165 ORTHO05D001328 2.4e-13 80.1 258 27.5
Duzib177G0698 Durio zibethinus HOM05D000165 ORTHO05D001328 2.1e-12 77.0 104 40.4
Haze_05069 Corylus avellana HOM05D000165 ORTHO05D001328 4.6e-12 75.9 184 30.4
Gohir.A13G112500 Gossypium hirsutum HOM05D000165 ORTHO05D001328 1.7e-11 73.9 104 38.5
Lalb_Chr03g0032681 Lupinus albus HOM05D000165 ORTHO05D001328 3.0e-11 73.2 93 38.7
Duzib138G1415 Durio zibethinus HOM05D000165 ORTHO05D001328 6.6e-11 72.0 104 38.5
QL12p019266 Quercus lobata HOM05D000165 ORTHO05D001328 6.6e-11 72.0 90 44.4
Thecc.01G316100 Theobroma cacao HOM05D000165 ORTHO05D001328 8.6e-11 71.6 89 42.7
Duzib128G0474 Durio zibethinus HOM05D000165 ORTHO05D001328 1.9e-10 70.5 104 38.5
Lj1g0006206 Lotus japonicus HOM05D000165 ORTHO05D001328 1.9e-10 70.5 92 42.4
Thecc.05G324000 Theobroma cacao HOM05D000165 ORTHO05D001328 1.9e-10 70.5 104 38.5
Lalb_Chr03g0032751 Lupinus albus HOM05D000165 ORTHO05D001328 2.5e-10 70.1 93 37.6
Thecc.05G324100 Theobroma cacao HOM05D000165 ORTHO05D001328 3.3e-10 69.7 59 59.3
Gohir.A13G176000 Gossypium hirsutum HOM05D000165 ORTHO05D001328 4.3e-10 69.3 77 50.6
VMungo1127G1914 Vigna mungo HOM05D003214 ORTHO05D023725 4.3e-10 69.3 44 77.3
COL.COLO4_05543 Corchorus olitorius HOM05D000165 ORTHO05D001328 5.6e-10 68.9 86 40.7
Gohir.D13G182300 Gossypium hirsutum HOM05D000165 ORTHO05D001328 5.6e-10 68.9 50 64.0
Gorai.013G207800 Gossypium raimondii HOM05D000165 ORTHO05D001328 5.6e-10 68.9 50 64.0
Sc25g0001680 Simmondsia chinensis HOM05D000165 ORTHO05D001328 5.6e-10 68.9 91 38.5
Cfa005768 Carpinus fangiana HOM05D000165 ORTHO05D001328 9.5e-10 68.2 104 37.5
CiPaw.08G115000 Carya illinoinensis HOM05D000165 ORTHO05D001328 1.6e-09 67.4 54 55.6
COL.COLO4_05542 Corchorus olitorius HOM05D000165 ORTHO05D001328 1.6e-09 67.4 48 62.5
Gohir.D12G127200 Gossypium hirsutum HOM05D000165 ORTHO05D001328 1.6e-09 67.4 104 37.5
Potri.005G012800 Populus trichocarpa HOM05D000165 ORTHO05D001328 1.6e-09 67.4 47 59.6
QL07p000569 Quercus lobata HOM05D000165 ORTHO05D001328 2.1e-09 67.0 104 35.6
TPR.G30743 Trifolium pratense HOM05D000165 ORTHO05D001328 2.1e-09 67.0 117 34.2
Glyma.02G086850 Glycine max HOM05D000165 ORTHO05D001328 2.8e-09 66.6 185 29.2
Gorai.008G138100 Gossypium raimondii HOM05D000165 ORTHO05D001328 2.8e-09 66.6 104 37.5
Medtr5g088300 Medicago truncatula HOM05D000165 ORTHO05D001328 2.8e-09 66.6 104 37.5
CANSAT54G1247 Cannabis sativa HOM05D000165 ORTHO05D001328 3.6e-09 66.2 91 38.5
AUR62029610 Chenopodium quinoa HOM05D000165 ORTHO05D001328 3.6e-09 66.2 104 36.5
Lalb_Chr02g0147751 Lupinus albus HOM05D000165 ORTHO05D001328 3.6e-09 66.2 103 35.0
VMungo1127G1983 Vigna mungo HOM05D000234 ORTHO05D000335 3.6e-09 66.2 36 91.7
EL10Ac4g09470 Beta vulgaris HOM05D000165 ORTHO05D001328 4.7e-09 65.9 215 27.4
Cfa006264 Carpinus fangiana HOM05D000165 ORTHO05D001328 4.7e-09 65.9 97 37.1
VMungo1215G0996 Vigna mungo HOM05D000234 ORTHO05D026217 4.7e-09 65.9 37 86.5
Ah.04g158610 Amaranthus hybridus HOM05D000165 ORTHO05D001328 6.2e-09 65.5 104 35.6
MELO3C020451.2 Cucumis melo HOM05D000165 ORTHO05D001328 6.2e-09 65.5 62 51.6
GSVIVG01001104001 Vitis vinifera HOM05D000165 ORTHO05D001328 6.2e-09 65.5 64 48.4
Ciclev10003837m.g Citrus clementina HOM05D000165 ORTHO05D001328 8.1e-09 65.1 104 34.6
COL.COLO4_23209 Corchorus olitorius HOM05D000165 ORTHO05D001328 1.1e-08 64.7 104 38.5
Glyma.02G294700 Glycine max HOM05D000165 ORTHO05D001328 1.4e-08 64.3 102 35.3
Nn3g19987 Nelumbo nucifera HOM05D000165 ORTHO05D001328 1.4e-08 64.3 106 36.8
PGR083G0813 Punica granatum HOM05D000165 ORTHO05D001328 1.4e-08 64.3 84 39.3
AT2G47280 Arabidopsis thaliana HOM05D000165 ORTHO05D001328 1.8e-08 63.9 58 51.7
arahy.Tifrunner.gnm1.ann1.XQ4L3G Arachis hypogaea HOM05D000165 ORTHO05D001328 1.8e-08 63.9 93 37.6
AUR62000383 Chenopodium quinoa HOM05D000165 ORTHO05D001328 1.8e-08 63.9 63 46.0
Thhalv10005316m.g Eutrema salsugineum HOM05D000165 ORTHO05D001328 1.8e-08 63.9 103 37.9
Manes.05G013700 Manihot esculenta HOM05D000165 ORTHO05D001328 1.8e-08 63.9 101 35.6
arahy.Tifrunner.gnm1.ann1.5FD7WC Arachis hypogaea HOM05D000165 ORTHO05D001328 2.3e-08 63.5 94 36.2
Cfa005771 Carpinus fangiana HOM05D000165 ORTHO05D001328 2.3e-08 63.5 104 38.5
Ciclev10007120m.g Citrus clementina HOM05D000165 ORTHO05D001328 2.3e-08 63.5 103 36.9
Haze_04553 Corylus avellana HOM05D000165 ORTHO05D001328 2.3e-08 63.5 93 34.4
Lj4g0026455 Lotus japonicus HOM05D000165 ORTHO05D001328 4.0e-08 62.8 93 34.4
Phvul.011G088200 Phaseolus vulgaris HOM05D000234 ORTHO05D000335 4.0e-08 62.8 36 83.3
MD04G1008100 Malus domestica HOM05D000165 ORTHO05D001328 5.2e-08 62.4 102 35.3
Manes.05G013801 Manihot esculenta HOM05D000165 ORTHO05D001328 5.2e-08 62.4 91 37.4
VMungo0647G2187 Vigna mungo HOM05D003335 ORTHO05D003853 5.2e-08 62.4 41 78.0
Potri.013G008100 Populus trichocarpa HOM05D000165 ORTHO05D001328 6.8e-08 62.0 87 37.9
Sed0004696 Sechium edule HOM05D000165 ORTHO05D001328 6.8e-08 62.0 52 50.0
Aa31LG11G9820 Aethionema arabicum HOM05D000165 ORTHO05D001328 8.9e-08 61.6 39 61.5
Dinv24466 Davidia involucrata HOM05D000165 ORTHO05D001328 8.9e-08 61.6 104 36.5
Gohir.A12G123600 Gossypium hirsutum HOM05D000165 ORTHO05D001328 8.9e-08 61.6 104 35.6
Lalb_Chr21g0310251 Lupinus albus HOM05D000165 ORTHO05D001328 8.9e-08 61.6 92 39.1
Manes.01G229500 Manihot esculenta HOM05D000165 ORTHO05D001328 8.9e-08 61.6 90 40.0
THA.LOC104820101 Tarenaya hassleriana HOM05D000165 ORTHO05D001328 8.9e-08 61.6 86 36.0
AT5G26810 Arabidopsis thaliana HOM05D000165 ORTHO05D001328 1.2e-07 61.2 84 39.3
Gorai.013G129900 Gossypium raimondii HOM05D000165 ORTHO05D001328 1.2e-07 61.2 55 54.5
THA.LOC104811145 Tarenaya hassleriana HOM05D000165 ORTHO05D001328 1.2e-07 61.2 54 50.0
Eucgr.H03296 Eucalyptus grandis HOM05D000165 ORTHO05D001328 1.5e-07 60.8 68 47.1
MBI18_g37565_MAGBIO Magnolia biondii HOM05D000165 ORTHO05D001328 1.5e-07 60.8 57 52.6
CsaV3_2G007170 Cucumis sativus L. HOM05D000165 ORTHO05D001328 2.0e-07 60.5 108 33.3
Lalb_Chr03g0032941 Lupinus albus HOM05D000165 ORTHO05D001328 2.0e-07 60.5 71 39.4
PGR083G2022 Punica granatum HOM05D000165 ORTHO05D001328 2.0e-07 60.5 89 37.1
VMungo0647G0739 Vigna mungo HOM05D000165 ORTHO05D001328 2.0e-07 60.5 130 29.2
CANSAT78G1554 Cannabis sativa HOM05D000165 ORTHO05D001328 2.6e-07 60.1 92 35.9
Manes.05G013901 Manihot esculenta HOM05D000165 ORTHO05D001328 2.6e-07 60.1 90 38.9
Medtr4g051810 Medicago truncatula HOM05D000165 ORTHO05D001328 2.6e-07 60.1 117 29.9
THA.LOC104802147 Tarenaya hassleriana HOM05D000165 ORTHO05D001328 2.6e-07 60.1 44 59.1
AUR62006737 Chenopodium quinoa HOM05D000165 ORTHO05D001328 3.4e-07 59.7 72 36.1
MELO3C004176.2 Cucumis melo HOM05D000165 ORTHO05D001328 3.4e-07 59.7 104 34.6
Lalb_Chr02g0155861 Lupinus albus HOM05D000165 ORTHO05D001328 3.4e-07 59.7 113 32.7
Phvul.008G272000 Phaseolus vulgaris HOM05D000165 ORTHO05D001328 3.4e-07 59.7 102 34.3
Eucgr.L00258 Eucalyptus grandis HOM05D000165 ORTHO05D001328 4.4e-07 59.3 103 34.0
Medtr5g088280 Medicago truncatula HOM05D000165 ORTHO05D001328 4.4e-07 59.3 95 34.7
Medtr5g088290 Medicago truncatula HOM05D000165 ORTHO05D001328 4.4e-07 59.3 95 34.7
Prupe.1G006800 Prunus persica HOM05D000165 ORTHO05D001328 4.4e-07 59.3 103 35.9
QL06p024397 Quercus lobata HOM05D000165 ORTHO05D001328 4.4e-07 59.3 62 46.8
Atru.chr4.1711 Acer truncatum HOM05D000165 ORTHO05D001328 5.8e-07 58.9 194 26.8
BcaB04g20402 Brassica carinata HOM05D000165 ORTHO05D001328 5.8e-07 58.9 58 50.0
Psat4g194800 Pisum sativum HOM05D000165 ORTHO05D001328 5.8e-07 58.9 104 36.5
Sed0012034 Sechium edule HOM05D000165 ORTHO05D001328 5.8e-07 58.9 62 45.2
A06p37050 Brassica napus HOM05D000165 ORTHO05D001328 7.6e-07 58.5 103 33.0
BolC7t44669H Brassica oleracea HOM05D000165 ORTHO05D001328 7.6e-07 58.5 103 33.0
BraA06t26630Z Brassica rapa HOM05D000165 ORTHO05D001328 7.6e-07 58.5 103 33.0
Glyma.10G146500 Glycine max HOM05D000165 ORTHO05D001328 7.6e-07 58.5 103 34.0
Glyma.11G190900 Glycine max HOM05D000234 ORTHO05D000335 7.6e-07 58.5 36 75.0
Potri.004G033700 Populus trichocarpa HOM05D000165 ORTHO05D001328 7.6e-07 58.5 51 49.0
Sp2g21180 Schrenkiella parvula HOM05D000165 ORTHO05D001328 7.6e-07 58.5 84 36.9
ClCG10G011540 Citrullus lanatus HOM05D000165 ORTHO05D001328 9.9e-07 58.2 52 48.1
MELO3C012935.2 Cucumis melo HOM05D000165 ORTHO05D001328 9.9e-07 58.2 47 51.1
Eucgr.L00260 Eucalyptus grandis HOM05D000165 ORTHO05D001328 9.9e-07 58.2 102 33.3
Manes.09G177300 Manihot esculenta HOM05D000165 ORTHO05D001328 9.9e-07 58.2 67 37.3
PSO210G6281 Papaver somniferum HOM05D000165 ORTHO05D001328 9.9e-07 58.2 63 44.4
QL03p014185 Quercus lobata HOM05D000165 ORTHO05D001328 9.9e-07 58.2 47 53.2
FvH4_6g15430 Fragaria vesca HOM05D000165 ORTHO05D001328 1.3e-06 57.8 51 51.0
Lalb_Chr21g0310241 Lupinus albus HOM05D000165 ORTHO05D001328 1.3e-06 57.8 89 38.2
Manes.01G229701 Manihot esculenta HOM05D000165 ORTHO05D001328 1.3e-06 57.8 104 35.6
PSO210G5600 Papaver somniferum HOM05D000165 ORTHO05D001328 1.3e-06 57.8 63 44.4
TPR.G30658 Trifolium pratense HOM05D000165 ORTHO05D001328 1.3e-06 57.8 103 33.0
Atru.chr2.355 Acer truncatum HOM05D000165 ORTHO05D001328 1.7e-06 57.4 48 50.0
BcaC03g13752 Brassica carinata HOM05D000165 ORTHO05D001328 1.7e-06 57.4 65 47.7
Thhalv10001795m.g Eutrema salsugineum HOM05D000165 ORTHO05D001328 1.7e-06 57.4 54 48.1
Carub.0006s2447 Capsella rubella HOM05D000165 ORTHO05D001328 2.2e-06 57.0 85 37.6
CARHR142680 Cardamine hirsuta HOM05D000165 ORTHO05D001328 2.2e-06 57.0 63 44.4
CARHR186720 Cardamine hirsuta HOM05D000165 ORTHO05D001328 2.2e-06 57.0 84 38.1
FAN02G3645 Fragaria x ananassa HOM05D000165 ORTHO05D001328 2.2e-06 57.0 51 51.0
FAN05G0735 Fragaria x ananassa HOM05D000165 ORTHO05D001328 2.2e-06 57.0 51 51.0
FAN14G2899 Fragaria x ananassa HOM05D000165 ORTHO05D001328 2.2e-06 57.0 51 49.0
Medtr5g093970 Medicago truncatula HOM05D000165 ORTHO05D001328 2.2e-06 57.0 117 32.5
Atru.chr4.2991 Acer truncatum HOM05D000165 ORTHO05D008234 2.9e-06 56.6 167 26.9
A01p31070 Brassica napus HOM05D000165 ORTHO05D001328 2.9e-06 56.6 58 46.6
C01p39590 Brassica napus HOM05D000165 ORTHO05D001328 2.9e-06 56.6 58 46.6
BolC1t03908H Brassica oleracea HOM05D000165 ORTHO05D001328 2.9e-06 56.6 58 46.6
BraA01t03232Z Brassica rapa HOM05D000165 ORTHO05D001328 2.9e-06 56.6 58 46.6
Nitab4.5_0002260g0200 Nicotiana tabacum HOM05D000165 ORTHO05D001328 2.9e-06 56.6 103 33.0
Psat0s2281g0120 Pisum sativum HOM05D000165 ORTHO05D001328 2.9e-06 56.6 116 32.8
Prupe.6G312200 Prunus persica HOM05D000165 ORTHO05D001328 2.9e-06 56.6 92 33.7
CiPaw.01G122000 Carya illinoinensis HOM05D000165 ORTHO05D001328 3.7e-06 56.2 58 48.3
Glyma.07G173500 Glycine max HOM05D000165 ORTHO05D001328 3.7e-06 56.2 105 36.2
Psat4g183840 Pisum sativum HOM05D000165 ORTHO05D001328 3.7e-06 56.2 104 35.6
CAN.G500.5 Capsicum annuum HOM05D000165 ORTHO05D001328 4.9e-06 55.8 57 45.6
ClCG02G014840 Citrullus lanatus HOM05D000165 ORTHO05D001328 4.9e-06 55.8 106 34.0
RcHm_v2.0_Chr4g0415461 Rosa chinensis HOM05D000165 ORTHO05D001328 4.9e-06 55.8 39 59.0
Ah.06g196000 Amaranthus hybridus HOM05D000165 ORTHO05D001328 6.4e-06 55.5 104 35.6
Aqoxy2G02713 Aquilegia oxysepala HOM05D000165 ORTHO05D001328 6.4e-06 55.5 48 52.1
AT2G19150 Arabidopsis thaliana HOM05D000165 ORTHO05D001328 6.4e-06 55.5 58 43.1
Migut.G00677 Erythranthe guttata HOM05D000165 ORTHO05D001328 6.4e-06 55.5 89 33.7
Psat5g303040 Pisum sativum HOM05D000165 ORTHO05D001328 6.4e-06 55.5 99 32.3
PGR083G1314 Punica granatum HOM05D000165 ORTHO05D001328 6.4e-06 55.5 50 48.0
Sabra13G0006800 Salix brachista HOM05D000165 ORTHO05D001328 6.4e-06 55.5 93 34.4
Sc25g0001720 Simmondsia chinensis HOM05D000165 ORTHO05D001328 6.4e-06 55.5 96 36.5
GSVIVG01000525001 Vitis vinifera HOM05D000165 ORTHO05D001328 6.4e-06 55.5 60 46.7
Duzib212G0647 Durio zibethinus HOM05D000165 ORTHO05D001328 8.4e-06 55.1 62 45.2
Manes.01G229601 Manihot esculenta HOM05D000165 ORTHO05D001328 8.4e-06 55.1 90 35.6
Nitab4.5_0000941g0180 Nicotiana tabacum HOM05D000165 ORTHO05D001328 8.4e-06 55.1 47 48.9
Psat2g010000 Pisum sativum HOM05D000165 ORTHO05D001328 8.4e-06 55.1 149 28.2
Solyc09g091730.4 Solanum lycopersicum HOM05D000165 ORTHO05D001328 8.4e-06 55.1 47 48.9
Sopen09g034620 Solanum pennellii HOM05D000165 ORTHO05D001328 8.4e-06 55.1 47 48.9
TPR.G15338 Trifolium pratense HOM05D000165 ORTHO05D001328 8.4e-06 55.1 92 37.0
TPR.G30497 Trifolium pratense HOM05D000165 ORTHO05D001328 8.4e-06 55.1 92 37.0


User provided reference genes

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