Gene: AT2G19150

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G19150
  • Transcript Identifier AT2G19150.1
  • Gene Type Coding gene
  • Location Chr2 : 8305100-8307444 : positive

Gene Family Information

  • ID HOM05D000165
  • #Genes/#Species 2272/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G19150.1
  • uniprot O64479

Descriptions

  • Description Pectin lyase-like superfamily protein
  • Computational description Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G47280.1); Has 2422 Blast hits to 2382 proteins in 317 species: Archae - 6; Bacteria - 609; Metazoa - 1; Fungi - 186; Plants - 1595; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
Gene Ontologycell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0045490
IBA
IEA
Gene Ontologypectin catabolic process1
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IBA
IEA
Gene Ontologypectinesterase activity1
GO:0030599
IEA
InterPropectinesterase activity
GO:0052689
IBA
Gene Ontologycarboxylic ester hydrolase activity1
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
IPR000070 Pectinesterase, catalytic
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase