Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0251G1503 Vigna mungo HOM05D003919 ORTHO05D004906 1.3e-224 782.7 392 100.0
Glyma.20G003400 Glycine max HOM05D003919 ORTHO05D004906 8.0e-182 640.6 352 89.5
Lj2g0026278 Lotus japonicus HOM05D003919 ORTHO05D004906 2.8e-179 632.1 352 87.5
TPR.G8246 Trifolium pratense HOM05D003919 ORTHO05D004906 1.8e-178 629.4 352 87.8
Ca_25292_v3 Cicer arietinum L. HOM05D003919 ORTHO05D004906 4.1e-178 628.2 352 87.8
Medtr1g037310 Medicago truncatula HOM05D003919 ORTHO05D004906 6.6e-176 620.9 352 86.9
Psat6g099280 Pisum sativum HOM05D003919 ORTHO05D004906 8.0e-174 614.0 352 85.5
Lalb_Chr04g0258931 Lupinus albus HOM05D003919 ORTHO05D004906 8.9e-173 610.5 352 85.5
arahy.Tifrunner.gnm1.ann1.FE7SUA Arachis hypogaea HOM05D003919 ORTHO05D004906 3.9e-168 595.1 360 80.8
CiPaw.05G168700 Carya illinoinensis HOM05D003919 ORTHO05D004906 8.6e-160 567.4 352 78.7
CARHR190420 Cardamine hirsuta HOM05D003919 ORTHO05D004906 3.6e-158 562.0 350 78.0
GSVIVG01012044001 Vitis vinifera HOM05D003919 ORTHO05D004906 1.1e-157 560.5 352 78.1
Sp2g24010 Schrenkiella parvula HOM05D003919 ORTHO05D004906 4.0e-157 558.5 350 77.7
Aa31LG11G2600 Aethionema arabicum HOM05D003919 ORTHO05D004906 6.8e-157 557.8 351 77.5
Duzib132G0455 Durio zibethinus HOM05D003919 ORTHO05D004906 1.5e-156 556.6 353 77.6
Thhalv10003499m.g Eutrema salsugineum HOM05D003919 ORTHO05D004906 1.5e-156 556.6 350 77.4
Carub.0006s2090 Capsella rubella HOM05D003919 ORTHO05D004906 2.6e-156 555.8 350 78.0
arahy.Tifrunner.gnm1.ann1.5S361I Arachis hypogaea HOM05D003919 ORTHO05D004906 3.4e-156 555.4 329 83.3
Cfa008737 Carpinus fangiana HOM05D003919 ORTHO05D004906 7.5e-156 554.3 352 77.3
QL03p046003 Quercus lobata HOM05D003919 ORTHO05D004906 7.5e-156 554.3 347 77.5
AL6G34300 Arabidopsis lyrata HOM05D003919 ORTHO05D004906 1.3e-155 553.5 350 77.4
AT5G23110 Arabidopsis thaliana HOM05D003919 ORTHO05D004906 1.3e-155 553.5 350 77.4
Ciclev10030469m.g Citrus clementina HOM05D003919 ORTHO05D004906 1.7e-155 553.1 348 76.1
A03p46400 Brassica napus HOM05D003919 ORTHO05D004906 4.9e-155 551.6 350 77.1
BolC7t44964H Brassica oleracea HOM05D003919 ORTHO05D004906 4.9e-155 551.6 350 77.1
BraA03t13766Z Brassica rapa HOM05D003919 ORTHO05D004906 4.9e-155 551.6 350 77.1
Thecc.02G160300 Theobroma cacao HOM05D003919 ORTHO05D004906 1.1e-154 550.4 354 76.3
Gohir.A12G134051 Gossypium hirsutum HOM05D003919 ORTHO05D004906 2.7e-153 545.8 354 76.0
FvH4_4g36870 Fragaria vesca HOM05D003919 ORTHO05D004906 4.6e-153 545.0 349 75.1
FAN12G0111 Fragaria x ananassa HOM05D003919 ORTHO05D004906 4.6e-153 545.0 349 75.1
Gohir.D12G137500 Gossypium hirsutum HOM05D003919 ORTHO05D004906 1.0e-152 543.9 354 75.7
RcHm_v2.0_Chr4g0446631 Rosa chinensis HOM05D003919 ORTHO05D004906 1.3e-152 543.5 350 74.6
AUR62015231 Chenopodium quinoa HOM05D003919 ORTHO05D004906 1.7e-152 543.1 348 76.1
Prupe.1G347000 Prunus persica HOM05D003919 ORTHO05D004906 3.0e-152 542.3 349 74.2
AUR62017695 Chenopodium quinoa HOM05D003919 ORTHO05D004906 6.6e-152 541.2 348 76.1
FAN17G2968 Fragaria x ananassa HOM05D003919 ORTHO05D004906 6.6e-152 541.2 350 74.6
Gorai.008G149000 Gossypium raimondii HOM05D003919 ORTHO05D004906 1.5e-151 540.0 354 75.1
THA.LOC104819381 Tarenaya hassleriana HOM05D003919 ORTHO05D004906 1.9e-151 539.7 351 74.4
Hund24370 Selenicereus undatus HOM05D003919 ORTHO05D004906 3.3e-151 538.9 347 75.8
Atru.chr11.1166 Acer truncatum HOM05D003919 ORTHO05D004906 7.3e-151 537.7 353 73.7
Eucgr.J00863 Eucalyptus grandis HOM05D003919 ORTHO05D004906 1.2e-150 537.0 360 72.2
Actinidia04322 Actinidia chinensis HOM05D003919 ORTHO05D004906 2.8e-150 535.8 351 74.1
MD16G1001800 Malus domestica HOM05D003919 ORTHO05D004906 3.6e-150 535.4 349 73.6
PGR044G0490 Punica granatum HOM05D003919 ORTHO05D004906 3.6e-150 535.4 356 73.6
Lj6C719G10 Lonicera japonica HOM05D003919 ORTHO05D004906 6.2e-150 534.6 350 74.3
CSS0046709 Camellia sinensis var. sinensis HOM05D003919 ORTHO05D004906 1.1e-149 533.9 353 73.7
FAN07G2510 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.4e-149 533.5 348 74.4
TWI53G0046 Tripterygium wilfordii HOM05D003919 ORTHO05D004906 1.4e-149 533.5 352 74.7
Ah.01g012280 Amaranthus hybridus HOM05D003919 ORTHO05D004906 1.8e-149 533.1 350 74.9
PSO782G3793 Papaver somniferum HOM05D003919 ORTHO05D004906 6.8e-149 531.2 349 74.2
Cc11_g02410 Coffea canephora HOM05D003919 ORTHO05D004906 8.9e-149 530.8 351 71.8
Nn4g24949 Nelumbo nucifera HOM05D003919 ORTHO05D004906 2.0e-148 529.6 349 73.1
Sopen02g003520 Solanum pennellii HOM05D003919 ORTHO05D004906 5.8e-148 528.1 353 72.2
CAN.G157.22 Capsicum annuum HOM05D003919 ORTHO05D004906 1.4e-146 523.5 350 72.9
MELO3C023597.2 Cucumis melo HOM05D003919 ORTHO05D004906 2.1e-145 519.6 344 73.5
CsaV3_7G030590 Cucumis sativus L. HOM05D003919 ORTHO05D004906 6.0e-145 518.1 344 73.3
Sed0027848 Sechium edule HOM05D003919 ORTHO05D004906 6.0e-145 518.1 350 72.3
HanXRQChr12g0366421 Helianthus annuus HOM05D003919 ORTHO05D004906 7.8e-145 517.7 350 72.0
DCAR_026901 Daucus carota HOM05D003919 ORTHO05D004906 1.0e-144 517.3 351 72.4
Migut.J01108 Erythranthe guttata HOM05D003919 ORTHO05D004906 1.0e-144 517.3 349 71.9
SGA_v2.0_scaffold17G08205 Striga asiatica HOM05D003919 ORTHO05D004906 6.6e-144 514.6 347 73.2
ECA233G1217 Erigeron canadensis HOM05D003919 ORTHO05D004906 1.5e-143 513.5 350 72.9
Aqoxy3G04259 Aquilegia oxysepala HOM05D003919 ORTHO05D004906 1.9e-143 513.1 346 72.0
Haze_11754 Corylus avellana HOM05D003919 ORTHO05D004906 3.3e-143 512.3 425 63.1
Lsat_1_v5_gn_8_31660 Lactuca sativa HOM05D003919 ORTHO05D004906 4.7e-142 508.4 349 71.9
vmacro10895 Vaccinium macrocarpon HOM05D003919 ORTHO05D004906 8.9e-141 504.2 349 71.3
Potri.005G093000 Populus trichocarpa HOM05D003919 ORTHO05D004906 3.2e-138 495.7 359 66.0
Sabra05G0077100 Salix brachista HOM05D003919 ORTHO05D004906 9.3e-138 494.2 359 66.3
EL10Ac9g22945 Beta vulgaris HOM05D003919 ORTHO05D004906 1.0e-136 490.7 358 69.3
ATR0618G139 Amborella trichopoda HOM05D003919 ORTHO05D004906 1.1e-135 487.3 348 68.4
Os04g0675101 Oryza sativa ssp. japonica HOM05D003919 ORTHO05D004906 3.3e-135 485.7 350 67.1
TAR374G0728 Trochodendron aralioides HOM05D003919 ORTHO05D004906 4.3e-135 485.3 314 74.5
Zm00001eb066370 Zea mays HOM05D003919 ORTHO05D004906 1.7e-131 473.4 345 66.4
CDE08G0505 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 4.2e-130 468.8 347 64.3
Peaxi162Scf00363g00329 Petunia axillaris HOM05D003919 ORTHO05D004906 1.2e-129 467.2 350 66.6
Nitab4.5_0000405g0040 Nicotiana tabacum HOM05D003919 ORTHO05D004906 3.4e-124 449.1 352 63.6
Pp3c9_15860 Physcomitrium patens HOM05D003919 ORTHO05D004906 4.5e-124 448.7 350 63.4
ClCG09G004560 Citrullus lanatus HOM05D003919 ORTHO05D004906 1.3e-123 447.2 425 57.2
Nitab4.5_0003853g0020 Nicotiana tabacum HOM05D003919 ORTHO05D004906 6.4e-123 444.9 352 62.5
Solyc02g014190.4 Solanum lycopersicum HOM05D003919 ORTHO05D004906 6.4e-123 444.9 350 64.6
Mapoly0175s0011 Marchantia polymorpha HOM05D003919 ORTHO05D004906 1.0e-120 437.6 352 62.2
FAN22G1631 Fragaria x ananassa HOM05D003919 ORTHO05D004906 2.3e-120 436.4 265 80.0
AagrBONN_evm.TU.Sc2ySwM_344.4345 Anthoceros agrestis HOM05D003919 ORTHO05D004906 2.1e-113 413.3 351 58.7
SMO164G0254 Selaginella moellendorffii HOM05D003919 ORTHO05D004906 5.7e-111 405.2 344 59.0
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 2.5e-98 363.2 243 71.2
Cpa.g.sc0.157 Carica papaya HOM05D003919 ORTHO05D004906 2.3e-96 356.7 242 70.2
MBI03_g34502_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 7.7e-92 341.7 243 65.0
SEGI_11727 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.5e-82 310.8 269 55.8
Glyma.09G282200 Glycine max HOM05D003919 ORTHO05D004906 6.1e-81 305.4 174 86.8
MCO02G364 Micromonas commoda HOM05D003919 ORTHO05D004906 1.7e-78 297.4 354 44.1
Cre01.g044850 Chlamydomonas reinhardtii HOM05D003919 ORTHO05D004906 2.2e-75 287.0 286 52.4
SEGI_14080 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 7.5e-63 245.4 249 47.0
Oeu055859.1 Olea europaea HOM05D003919 ORTHO05D004906 1.8e-61 240.7 176 65.3
Sc06g0007940 Simmondsia chinensis HOM05D003919 ORTHO05D004906 1.2e-60 238.0 347 38.6
C07p44420 Brassica napus HOM05D003919 ORTHO05D004906 2.0e-60 237.3 354 37.6
Manes.04G066100 Manihot esculenta HOM05D003919 ORTHO05D004906 6.6e-59 232.3 359 37.9
Gohir.A12G133950 Gossypium hirsutum HOM05D003919 ORTHO05D004906 8.0e-57 225.3 264 42.4
Dinv11717 Davidia involucrata HOM05D003919 ORTHO05D004906 1.4e-56 224.6 246 45.1
TAR374G1487 Trochodendron aralioides HOM05D003919 ORTHO05D004906 3.0e-56 223.4 246 44.7
COL.COLO4_13755 Corchorus olitorius HOM05D003919 ORTHO05D004906 5.2e-56 222.6 255 43.1
HPP92_012909 Vanilla planifolia HOM05D003919 ORTHO05D004906 2.0e-55 220.7 254 41.7
Lj6A719G43 Lonicera japonica HOM05D003919 ORTHO05D004906 3.4e-55 219.9 357 35.0
FAN14G1298 Fragaria x ananassa HOM05D003919 ORTHO05D004906 5.2e-48 196.1 111 86.5
FAN25G1432 Fragaria x ananassa HOM05D003919 ORTHO05D004906 8.9e-48 195.3 113 84.1
FAN27G1315 Fragaria x ananassa HOM05D003919 ORTHO05D004906 1.2e-47 194.9 111 85.6
Cpa.g.sc0.159 Carica papaya HOM05D003919 ORTHO05D004906 1.3e-46 191.4 115 80.9
C07p44430 Brassica napus HOM05D003919 ORTHO05D004906 3.7e-46 189.9 109 85.3
COL.COLO4_13756 Corchorus olitorius HOM05D003919 ORTHO05D004906 1.2e-44 184.9 111 82.9
MBI03_g34501_MAGBIO Magnolia biondii HOM05D003919 ORTHO05D004906 1.1e-42 178.3 112 78.6
Oeu055860.1 Olea europaea HOM05D003919 ORTHO05D004906 1.1e-42 178.3 107 82.2
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 1.2e-41 174.9 216 38.9
SEGI_22186 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 1.3e-38 164.9 111 73.9
HPP92_012883 Vanilla planifolia HOM05D000456 ORTHO05D004906 1.3e-38 164.9 106 75.5
HPP92_012910 Vanilla planifolia HOM05D003919 ORTHO05D004906 2.1e-33 147.5 92 76.1
Psat0s1455g0040 Pisum sativum HOM05D003919 ORTHO05D004906 5.8e-23 112.8 200 34.0
Phvul.003G005926 Phaseolus vulgaris HOM05D003919 ORTHO05D004906 2.7e-20 104.0 346 26.9
CiPaw.05G168800 Carya illinoinensis HOM05D003919 ORTHO05D004906 1.5e-18 98.2 341 28.2
SEGI_33076 Sequoiadendron giganteum HOM05D003919 ORTHO05D004188 8.1e-17 92.4 139 37.4
FvH4_5g39264 Fragaria vesca HOM05D000731 ORTHO05D004906 6.4e-14 82.8 48 89.6
FAN08G1746 Fragaria x ananassa HOM05D003919 ORTHO05D005006 1.9e-13 81.3 48 87.5
SEGI_33576 Sequoiadendron giganteum HOM05D003919 ORTHO05D004906 2.3e-11 74.3 65 50.8
CDE08G0032 Ceratophyllum demersum HOM05D003919 ORTHO05D004906 1.3e-09 68.6 155 30.3
Cpa.g.sc0.155 Carica papaya HOM05D003919 ORTHO05D004906 5.3e-08 63.2 181 30.4
Cpa.g.sc0.156 Carica papaya HOM05D003919 ORTHO05D004906 5.3e-08 63.2 181 30.4
HPP92_012876 Vanilla planifolia HOM05D003919 ORTHO05D004906 5.3e-08 63.2 45 57.8


User provided reference genes

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