Gene: AT5G23110

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G23110
  • Transcript Identifier AT5G23110.1
  • Gene Type Coding gene
  • Location Chr5 : 7758307-7775509 : positive

Gene Family Information

  • ID HOM05D003919
  • #Genes/#Species 178/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G23110.1
  • uniprot Q9FN44

Descriptions

  • Description Zinc finger, C3HC4 type (RING finger) family protein
  • Computational description Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Transmembrane Fragile-X-F-associated protein (TAIR:AT1G73950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma1
GO:0009536
HDA
Gene Ontologyplastid2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR001841 Zinc finger, RING-type
Mapman id Description
35.1 not assigned.annotated