Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 4.7e-274 947.2 461 100.0
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 4.7e-274 947.2 461 100.0
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 1.4e-233 812.8 461 86.1
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 3.4e-232 808.1 462 85.3
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 1.1e-230 803.1 457 86.0
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 1.9e-230 802.4 462 86.8
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 2.3e-228 795.4 463 86.2
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 1.5e-227 792.7 461 85.9
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 1.5e-227 792.7 461 85.9
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 4.3e-227 791.2 461 86.1
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 3.6e-226 788.1 461 85.0
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 5.3e-225 784.3 461 85.0
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 1.5e-224 782.7 453 84.8
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 1.9e-206 722.6 493 74.4
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 1.7e-194 682.9 454 73.3
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 4.7e-165 585.1 456 63.4
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 2.3e-164 582.8 455 61.8
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 6.8e-164 581.3 451 61.0
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.0e-163 579.7 451 60.8
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 2.6e-163 579.3 455 62.4
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 3.4e-163 578.9 452 61.9
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 4.4e-163 578.6 457 63.2
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 7.5e-163 577.8 462 61.9
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 7.5e-163 577.8 468 61.5
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 1.7e-162 576.6 467 61.7
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 6.3e-162 574.7 454 62.1
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 8.3e-162 574.3 481 59.0
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.1e-161 573.9 456 60.5
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 3.1e-161 572.4 478 59.0
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 5.4e-161 571.6 468 60.3
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 7.0e-161 571.2 474 60.1
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 2.0e-160 569.7 459 60.3
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.0e-159 567.4 472 61.2
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 2.3e-159 566.2 456 60.7
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 2.9e-159 565.8 469 59.9
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 2.9e-159 565.8 458 59.0
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 6.6e-159 564.7 472 60.0
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 6.6e-159 564.7 454 60.6
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.1e-158 563.9 466 60.9
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 2.5e-158 562.8 456 59.6
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 3.3e-158 562.4 465 60.0
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 4.3e-158 562.0 469 60.6
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 5.6e-158 561.6 456 61.6
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 7.3e-158 561.2 454 60.6
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 1.6e-157 560.1 462 59.3
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 3.6e-157 558.9 455 59.6
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.4e-156 557.0 463 57.7
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 1.8e-156 556.6 455 59.1
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 5.2e-156 555.1 455 58.9
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 1.5e-155 553.5 466 58.2
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 4.4e-155 552.0 460 58.7
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 9.8e-155 550.8 474 57.6
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 2.9e-154 549.3 460 59.3
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 3.7e-154 548.9 456 59.0
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 3.7e-154 548.9 461 59.7
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 4.9e-154 548.5 478 57.1
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 4.9e-154 548.5 478 59.2
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 8.3e-154 547.7 461 58.4
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 3.2e-153 545.8 460 58.0
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 1.6e-152 543.5 486 57.2
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 1.3e-151 540.4 454 59.5
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 2.3e-151 539.7 459 57.7
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.0e-151 539.3 487 55.2
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 2.1e-149 533.1 492 56.3
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 6.2e-149 531.6 494 54.0
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 1.8e-148 530.0 468 56.8
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 3.1e-148 529.3 461 56.2
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.2e-147 527.3 454 57.7
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.2e-147 527.3 482 55.2
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 1.5e-147 526.9 521 52.2
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 2.0e-147 526.6 449 58.8
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 2.6e-147 526.2 459 58.4
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.3e-146 523.9 460 55.9
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.2e-146 523.1 464 56.5
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 1.9e-145 520.0 464 55.2
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 3.2e-145 519.2 481 55.5
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 3.2e-145 519.2 446 58.5
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.7e-144 516.2 478 55.4
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 7.3e-142 508.1 461 55.3
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.2e-139 500.7 465 53.8
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 1.3e-138 497.3 419 60.6
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 1.9e-137 493.4 495 50.1
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 2.4e-137 493.0 418 59.1
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.0e-135 487.6 465 53.3
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 2.2e-130 469.9 474 52.5
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 8.4e-130 468.0 416 56.2
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 4.6e-128 462.2 443 52.8
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.8e-125 453.0 478 49.8
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 2.6e-123 446.4 383 57.4
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 3.8e-122 442.6 383 57.2
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 2.3e-119 433.3 351 59.3
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 3.9e-119 432.6 447 48.1
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.3e-117 427.6 366 57.9
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 3.6e-117 426.0 355 59.4
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 9.0e-116 421.4 451 49.2
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 1.3e-114 417.5 335 59.7
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 4.8e-109 399.1 464 45.3
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 3.1e-108 396.4 361 51.8
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 1.7e-106 390.6 517 40.8
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.9e-105 387.1 462 44.4
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 3.3e-102 376.3 488 42.4
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 7.9e-96 355.1 346 52.6
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 4.3e-94 349.4 291 59.8
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 4.8e-93 345.9 458 39.1
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 1.8e-76 290.8 435 40.0
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 1.2e-75 288.1 446 38.3
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 9.1e-60 235.3 245 48.2
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 4.7e-48 196.4 480 28.5
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 3.0e-47 193.7 278 39.9
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.1e-44 185.3 216 42.6
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.2e-40 171.8 154 59.1
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 4.7e-40 169.9 154 57.8
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 2.2e-37 161.0 232 42.7
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 3.2e-36 157.1 466 28.8
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 5.8e-22 109.8 107 50.5
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.7e-21 108.2 222 34.2
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.2e-19 102.1 809 19.0
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 2.3e-18 97.8 108 50.9
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 2.2e-13 81.3 43 88.4
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.8e-13 80.5 74 55.4
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 4.6e-11 73.6 63 42.9
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.2e-08 63.2 69 52.2
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.8e-07 61.6 72 44.4
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 4.0e-07 60.5 75 45.3


User provided reference genes

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