Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 1.2e-108 398.3 684 100.0
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 1.1e-85 322.0 681 94.6
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 1.0e-83 315.5 680 94.1
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 1.0e-83 315.5 680 94.1
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 1.0e-83 315.5 680 94.1
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 5.1e-83 313.2 682 93.4
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 9.6e-82 308.9 680 93.4
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 1.6e-81 308.1 686 92.4
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 1.8e-80 304.7 680 93.4
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 1.1e-77 295.4 686 92.4
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 1.8e-72 278.1 685 91.1
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 4.1e-72 276.9 683 91.4
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 4.2e-69 266.9 680 90.4
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 4.1e-56 223.8 687 85.0
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 2.3e-51 208.0 189 59.8
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 6.7e-51 206.5 198 60.1
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 3.3e-50 204.1 199 60.8
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 9.7e-50 202.6 189 59.3
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 1.3e-49 202.2 196 59.2
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 2.8e-49 201.1 203 55.7
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 3.7e-49 200.7 186 59.1
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 1.1e-48 199.1 192 58.9
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 1.6e-47 195.3 198 58.1
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 7.7e-47 193.0 201 56.2
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 1.0e-46 192.6 192 55.7
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 1.9e-45 188.3 201 56.2
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 1.9e-45 188.3 133 73.7
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 2.5e-45 188.0 186 57.0
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 3.2e-45 187.6 186 56.5
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 1.2e-44 185.7 198 57.6
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 2.1e-44 184.9 190 56.3
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 3.6e-44 184.1 191 56.0
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 8.0e-44 183.0 193 53.9
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 1.4e-43 182.2 185 55.1
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 3.0e-43 181.0 197 52.8
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 3.0e-43 181.0 191 55.0
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 5.2e-43 180.3 136 70.6
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 5.2e-43 180.3 187 53.5
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 5.2e-43 180.3 187 52.9
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 5.2e-43 180.3 187 52.9
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 6.7e-43 179.9 140 67.1
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.5e-42 178.7 191 54.5
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.5e-42 178.7 191 54.5
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 1.5e-42 178.7 186 54.3
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 2.0e-42 178.3 152 61.2
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 2.0e-42 178.3 174 56.9
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 2.6e-42 177.9 195 53.3
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 4.4e-42 177.2 200 53.0
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 7.5e-42 176.4 106 80.2
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 9.7e-42 176.0 147 62.6
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 1.3e-41 175.6 189 54.5
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 1.7e-41 175.3 123 72.4
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 2.2e-41 174.9 115 73.9
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 2.8e-41 174.5 152 61.2
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 3.7e-41 174.1 138 62.3
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 4.8e-41 173.7 191 54.5
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 4.8e-41 173.7 138 65.2
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 6.3e-41 173.3 200 51.5
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 6.3e-41 173.3 194 53.6
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 6.3e-41 173.3 194 53.6
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 1.4e-40 172.2 138 66.7
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 3.1e-40 171.0 137 63.5
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 4.1e-40 170.6 116 72.4
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 9.1e-40 169.5 99 84.8
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 9.1e-40 169.5 165 58.2
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 9.1e-40 169.5 188 53.2
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 9.1e-40 169.5 156 57.7
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 2.0e-39 168.3 133 65.4
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 6.5e-38 163.3 140 58.6
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 3.2e-37 161.0 121 69.4
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 4.2e-37 160.6 99 78.8
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 4.2e-37 160.6 113 68.1
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 7.2e-37 159.8 189 50.8
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.6e-36 158.7 196 49.0
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 1.6e-36 158.7 150 58.7
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 4.7e-36 157.1 140 57.9
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 1.4e-35 155.6 99 77.8
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 3.0e-35 154.5 215 45.6
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 1.2e-34 152.5 151 53.6
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 2.0e-34 151.8 168 50.6
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 5.7e-34 150.2 126 61.9
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 7.5e-34 149.8 144 54.2
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 1.3e-33 149.1 109 64.2
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 1.4e-32 145.6 164 49.4
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 1.4e-32 145.6 164 49.4
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 2.4e-32 144.8 95 73.7
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 1.1e-24 119.4 164 45.1
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 1.6e-23 115.5 69 78.3
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 5.9e-23 113.6 64 79.7
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 7.3e-21 106.7 61 78.7
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 1.6e-20 105.5 93 57.0
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 3.6e-20 104.4 128 41.4
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 6.1e-20 103.6 102 44.1
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 6.1e-20 103.6 102 44.1
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 1.2e-18 99.4 64 73.4
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 7.5e-18 96.7 100 48.0
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 1.7e-17 95.5 105 50.5
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 2.2e-17 95.1 100 46.0
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 5.9e-15 87.0 51 76.5
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 8.6e-14 83.2 64 57.8
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 2.8e-12 78.2 59 59.3
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 1.1e-11 76.3 64 50.0
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.9e-09 68.2 35 88.6
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.2e-07 62.8 67 58.2
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 3.5e-07 61.2 53 67.9


User provided reference genes

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