Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 3.5e-82 308.1 146 100.0
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 7.3e-80 300.4 146 96.6
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 2.4e-78 295.4 147 95.9
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 3.1e-78 295.0 147 95.2
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 5.2e-78 294.3 147 95.2
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 4.9e-76 287.7 146 94.5
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 4.9e-76 287.7 146 94.5
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 6.4e-76 287.3 146 93.8
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 1.2e-74 283.1 147 93.9
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 2.7e-74 282.0 146 90.4
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 1.0e-73 280.0 146 91.1
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 6.6e-73 277.3 148 91.9
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 1.9e-72 275.8 147 91.8
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 2.8e-71 271.9 146 87.7
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 4.4e-69 264.6 146 86.3
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.3e-68 263.1 146 85.6
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 2.9e-68 261.9 146 84.9
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 2.4e-67 258.8 146 84.9
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 3.9e-65 251.5 150 82.7
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 3.3e-64 248.4 146 80.8
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 1.6e-63 246.1 147 81.0
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 2.1e-63 245.7 150 81.3
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 2.1e-63 245.7 146 80.8
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 4.8e-63 244.6 147 80.3
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.1e-62 243.4 146 79.5
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 2.4e-62 242.3 131 85.5
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 3.1e-62 241.9 147 80.3
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 4.0e-62 241.5 147 80.3
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 5.3e-62 241.1 148 79.7
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 5.3e-62 241.1 131 84.7
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 6.9e-62 240.7 131 85.5
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 9.0e-62 240.4 140 82.9
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 1.2e-61 240.0 147 80.3
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 1.5e-61 239.6 143 80.4
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 2.0e-61 239.2 148 80.4
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 2.0e-61 239.2 143 80.4
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 2.6e-61 238.8 148 79.1
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 2.6e-61 238.8 138 82.6
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 2.6e-61 238.8 145 81.4
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 2.6e-61 238.8 141 80.9
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 3.4e-61 238.4 147 78.9
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 3.4e-61 238.4 146 79.5
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 4.5e-61 238.0 122 90.2
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 5.8e-61 237.7 147 78.9
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 7.6e-61 237.3 144 80.6
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 9.9e-61 236.9 136 83.1
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 1.3e-60 236.5 143 80.4
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 1.7e-60 236.1 148 78.4
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 2.2e-60 235.7 148 78.4
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 3.8e-60 235.0 134 82.1
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 8.4e-60 233.8 135 83.0
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 8.4e-60 233.8 140 80.7
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 8.4e-60 233.8 146 78.1
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 8.4e-60 233.8 146 78.1
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 1.1e-59 233.4 138 81.2
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.9e-59 232.6 148 77.0
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 1.9e-59 232.6 140 80.0
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 1.9e-59 232.6 140 80.0
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 2.4e-59 232.3 140 79.3
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 2.4e-59 232.3 148 77.0
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 2.4e-59 232.3 128 85.2
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 3.2e-59 231.9 146 74.0
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 4.2e-59 231.5 138 80.4
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 4.2e-59 231.5 146 76.0
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 4.2e-59 231.5 127 83.5
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 5.4e-59 231.1 148 74.3
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 7.1e-59 230.7 141 76.6
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 9.3e-59 230.3 120 86.7
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 1.2e-58 229.9 140 79.3
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 1.6e-58 229.6 143 76.9
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 1.6e-58 229.6 150 74.0
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 2.1e-58 229.2 148 75.7
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 2.7e-58 228.8 148 75.7
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 2.7e-58 228.8 145 76.6
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 4.6e-58 228.0 146 74.7
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 4.6e-58 228.0 147 75.5
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 1.0e-57 226.9 150 74.7
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 1.8e-57 226.1 147 75.5
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 2.3e-57 225.7 127 82.7
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 2.3e-57 225.7 132 78.8
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 2.3e-57 225.7 157 72.0
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 3.0e-57 225.3 119 84.9
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 3.9e-57 224.9 137 79.6
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 3.9e-57 224.9 141 75.9
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 3.9e-57 224.9 112 89.3
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 8.7e-57 223.8 112 94.6
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 8.7e-57 223.8 134 79.1
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 8.7e-57 223.8 134 79.1
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 8.7e-57 223.8 134 79.1
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 1.1e-56 223.4 129 79.1
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 2.5e-56 222.2 148 73.0
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 4.3e-56 221.5 143 73.4
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 2.1e-55 219.2 148 72.3
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 2.8e-55 218.8 122 82.0
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 4.8e-55 218.0 142 75.4
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 4.0e-54 214.9 146 73.3
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 9.0e-54 213.8 133 78.2
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 1.2e-53 213.4 112 83.9
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 2.0e-53 212.6 140 75.0
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 2.6e-53 212.2 134 74.6
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 5.8e-53 211.1 165 64.8
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 5.8e-53 211.1 165 64.8
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 5.8e-53 211.1 128 76.6
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 7.6e-53 210.7 119 80.7
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 9.9e-53 210.3 129 77.5
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 9.9e-53 210.3 127 77.2
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 8.4e-52 207.2 159 65.4
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 8.4e-52 207.2 126 75.4
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 1.9e-51 206.1 133 72.2
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 7.1e-51 204.1 105 87.6
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 7.9e-50 200.7 118 76.3
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 3.0e-49 198.7 122 72.1
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 3.9e-49 198.4 120 74.2
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 5.1e-49 198.0 174 59.2
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 7.4e-48 194.1 104 81.7
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 1.6e-47 193.0 111 83.8
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.1e-47 192.6 104 80.8
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 3.1e-46 188.7 121 72.7
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 6.9e-46 187.6 153 66.7
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 8.4e-44 180.6 149 63.1
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.1e-43 180.3 152 63.2
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 2.1e-42 176.0 91 82.4
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.7e-42 175.6 149 63.1
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 6.7e-41 171.0 113 74.3
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 2.4e-38 162.5 137 64.2
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 1.5e-37 159.8 88 85.2
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.0e-36 157.1 114 67.5
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 5.0e-36 154.8 78 83.3
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 4.2e-35 151.8 100 80.0
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 1.8e-30 136.3 73 80.8
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 4.1e-30 135.2 86 80.2
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 5.0e-28 128.3 104 60.6
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 8.8e-25 117.5 64 76.6
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 1.2e-21 107.1 62 72.6
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 5.0e-20 101.7 52 88.5
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 8.8e-17 90.9 43 83.7
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 4.4e-16 88.6 81 64.2
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 1.1e-14 84.0 53 81.1
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.8e-14 83.2 52 69.2
CARHR102660 Cardamine hirsuta HOM05D005035 ORTHO05D006141 4.5e-13 78.6 42 85.7
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 5.5e-11 71.6 37 91.9
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.4e-09 67.0 40 70.0
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.3e-09 66.2 49 63.3
Dinv33674 Davidia involucrata HOM05D005035 ORTHO05D006141 2.2e-07 59.7 51 64.7
CSS0011814 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 4.8e-07 58.5 30 73.3


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