Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 5.5e-206 720.7 356 100.0
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 1.5e-182 642.9 356 89.6
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 5.8e-179 630.9 355 88.7
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 1.2e-176 623.2 357 88.0
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 1.9e-174 615.9 350 87.4
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 4.3e-174 614.8 356 85.4
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 1.3e-167 593.2 350 85.7
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 3.0e-167 592.0 351 85.8
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 5.1e-167 591.3 350 85.1
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 3.3e-166 588.6 350 84.9
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 5.6e-166 587.8 351 84.9
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 5.6e-166 587.8 351 84.9
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 9.9e-147 523.9 377 71.1
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 1.9e-137 493.0 350 72.6
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 6.7e-119 431.4 343 65.6
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 2.8e-117 426.0 348 63.5
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 1.4e-116 423.7 302 69.2
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 6.9e-116 421.4 296 70.3
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 9.0e-116 421.0 347 63.7
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 2.6e-115 419.5 293 70.6
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 7.7e-115 417.9 292 69.5
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 5.0e-114 415.2 351 61.0
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 5.0e-114 415.2 292 68.8
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 1.9e-113 413.3 306 67.0
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 2.5e-113 412.9 351 60.4
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 3.6e-112 409.1 297 67.0
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 1.4e-111 407.1 350 60.3
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 5.1e-111 405.2 295 68.1
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 8.8e-111 404.4 351 59.5
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.5e-110 403.7 328 62.8
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 2.5e-110 402.9 351 60.1
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 7.4e-110 401.4 332 60.8
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 9.7e-110 401.0 359 59.3
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 2.2e-109 399.8 343 60.1
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 2.8e-109 399.4 326 60.4
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 2.8e-109 399.4 310 65.2
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 4.8e-109 398.7 365 58.6
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 6.3e-109 398.3 343 59.8
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 8.2e-109 397.9 328 62.5
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.1e-108 397.5 328 62.5
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 6.9e-108 394.8 347 59.4
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 1.5e-107 393.7 298 67.4
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 1.5e-107 393.7 290 67.2
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 7.7e-107 391.3 336 60.4
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.0e-106 391.0 310 64.2
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 1.3e-106 390.6 315 62.9
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.3e-106 390.6 310 63.9
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 1.3e-106 390.6 343 58.6
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 1.7e-106 390.2 317 62.1
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 2.9e-106 389.4 319 61.1
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 3.8e-106 389.0 283 67.1
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 5.0e-106 388.7 294 65.3
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 5.0e-106 388.7 415 53.0
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 1.1e-105 387.5 339 57.8
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 1.1e-105 387.5 282 65.6
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 1.9e-105 386.7 283 66.1
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 4.2e-105 385.6 314 61.5
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 1.6e-104 383.6 283 65.7
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 3.9e-103 379.0 283 65.0
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 8.8e-103 377.9 297 64.3
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 4.4e-102 375.6 283 65.4
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 7.4e-102 374.8 283 66.1
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 9.7e-102 374.4 328 59.1
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 2.8e-101 372.9 283 66.1
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 6.3e-101 371.7 366 56.8
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 6.3e-101 371.7 290 64.1
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 1.8e-100 370.2 290 62.8
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 3.5e-99 365.9 290 61.4
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 4.5e-99 365.5 328 58.5
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 1.3e-98 364.0 294 62.9
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 1.7e-98 363.6 312 59.9
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 3.8e-98 362.5 338 55.9
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 8.5e-98 361.3 291 63.2
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 1.5e-97 360.5 285 63.9
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 4.2e-97 359.0 295 61.0
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 5.2e-95 352.1 292 59.2
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 8.8e-95 351.3 332 55.4
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 2.6e-94 349.7 325 56.3
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 1.2e-91 340.9 325 56.6
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 3.5e-91 339.3 293 59.0
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 2.2e-90 336.7 313 57.2
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 8.0e-88 328.2 283 60.8
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 4.0e-87 325.9 304 56.6
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 1.1e-84 317.8 249 61.8
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 1.1e-84 317.8 249 64.7
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 1.1e-81 307.8 304 54.3
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 9.4e-81 304.7 282 55.0
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.5e-78 295.0 278 56.5
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.6e-75 287.3 292 54.1
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 5.9e-75 285.4 292 52.4
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 5.0e-74 282.3 201 66.7
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 3.3e-73 279.6 302 52.0
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 1.8e-71 273.9 295 47.8
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 6.4e-69 265.4 261 52.1
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 8.3e-69 265.0 323 45.8
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.4e-68 264.2 308 45.5
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 8.0e-64 248.4 304 42.4
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 4.9e-53 212.6 171 60.8
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 5.4e-52 209.1 228 46.1
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 1.6e-48 197.6 192 53.6
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 1.8e-47 194.1 290 37.9
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 2.3e-47 193.7 137 65.7
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 2.0e-46 190.7 156 59.0
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 3.3e-41 173.3 384 33.3
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 8.7e-34 148.7 163 46.6
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 1.3e-32 144.8 303 35.0
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.6e-27 127.9 147 46.3
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 1.2e-19 101.7 67 67.2
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 6.0e-19 99.4 101 50.5
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 2.3e-18 97.4 80 56.2
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 8.4e-13 79.0 153 35.9
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 6.3e-08 62.8 244 25.8
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 2.4e-07 60.8 62 50.0
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 2.4e-07 60.8 62 50.0
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 4.1e-07 60.1 164 31.1
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 5.3e-07 59.7 170 31.8
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 5.3e-07 59.7 170 31.8
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 5.3e-07 59.7 180 31.7
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 9.0e-07 58.9 159 32.7
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 1.2e-06 58.5 170 31.2
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 2.0e-06 57.8 182 30.8
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 2.6e-06 57.4 178 30.3
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 7.6e-06 55.8 243 27.2


User provided reference genes

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