Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 5.3e-102 374.4 196 100.0
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 1.0e-89 333.6 195 88.2
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 1.8e-81 306.2 202 80.2
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 2.6e-80 302.4 202 78.7
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 7.5e-80 300.8 202 78.7
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 1.0e-76 290.4 196 78.1
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 4.3e-75 285.0 196 77.0
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 7.3e-75 284.3 196 77.6
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 1.1e-73 280.4 196 76.5
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 1.1e-73 280.4 196 76.5
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 1.2e-72 276.9 197 77.7
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 9.8e-72 273.9 205 73.2
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 7.8e-69 264.2 173 76.9
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 1.2e-56 223.8 179 64.8
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 2.1e-53 213.0 137 76.6
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 2.7e-53 212.6 185 61.6
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 3.5e-53 212.2 184 61.4
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 6.0e-53 211.5 155 67.1
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 1.0e-52 210.7 112 86.6
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 1.7e-52 209.9 144 71.5
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 2.3e-52 209.5 149 69.8
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 2.3e-52 209.5 149 69.8
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 3.9e-52 208.8 121 81.8
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 3.9e-52 208.8 120 82.5
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 3.9e-52 208.8 125 79.2
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 5.1e-52 208.4 112 86.6
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 5.1e-52 208.4 177 62.1
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 6.6e-52 208.0 149 69.8
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 8.7e-52 207.6 150 68.7
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 8.7e-52 207.6 150 68.7
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 1.1e-51 207.2 132 76.5
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 2.5e-51 206.1 112 83.9
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 2.5e-51 206.1 198 56.6
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 4.3e-51 205.3 149 67.8
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 4.3e-51 205.3 149 67.8
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 4.3e-51 205.3 155 67.7
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 4.3e-51 205.3 111 84.7
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 5.6e-51 204.9 171 64.9
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 5.6e-51 204.9 171 64.9
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 5.6e-51 204.9 150 68.0
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 5.6e-51 204.9 158 63.3
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 5.6e-51 204.9 112 84.8
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 7.3e-51 204.5 147 67.3
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 9.6e-51 204.1 111 83.8
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 1.2e-50 203.8 126 77.0
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 1.2e-50 203.8 162 63.6
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 1.2e-50 203.8 160 65.6
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 1.6e-50 203.4 112 83.0
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 2.1e-50 203.0 120 80.8
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 3.6e-50 202.2 149 68.5
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 3.6e-50 202.2 149 66.4
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 3.6e-50 202.2 173 63.6
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 6.2e-50 201.4 132 72.0
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 8.1e-50 201.1 165 64.8
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 8.1e-50 201.1 136 71.3
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 1.1e-49 200.7 149 66.4
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 1.1e-49 200.7 162 63.0
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.1e-49 200.7 148 68.2
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 1.1e-49 200.7 166 62.7
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 1.4e-49 200.3 118 78.0
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 1.4e-49 200.3 114 80.7
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 2.4e-49 199.5 145 66.9
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 3.1e-49 199.1 158 62.7
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 4.0e-49 198.7 134 72.4
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 6.9e-49 198.0 133 72.2
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 9.0e-49 197.6 159 62.3
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 1.5e-48 196.8 112 81.2
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.5e-48 196.8 111 82.0
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 2.6e-48 196.1 159 64.2
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 2.6e-48 196.1 157 64.3
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.6e-48 196.1 143 67.8
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 5.8e-48 194.9 198 54.5
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 7.6e-48 194.5 134 70.9
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 9.9e-48 194.1 111 82.0
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 9.9e-48 194.1 111 82.0
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 9.9e-48 194.1 111 82.0
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 1.3e-47 193.7 139 69.8
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 1.7e-47 193.4 139 67.6
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 1.7e-47 193.4 142 66.2
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 2.2e-47 193.0 112 79.5
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 4.9e-47 191.8 111 79.3
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 6.4e-47 191.4 164 61.0
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 6.4e-47 191.4 112 78.6
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 1.4e-46 190.3 171 57.9
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 1.4e-46 190.3 154 61.7
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 1.9e-46 189.9 143 63.6
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 2.4e-46 189.5 177 57.6
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 3.2e-46 189.1 171 57.3
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 5.4e-46 188.3 120 75.0
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 5.4e-46 188.3 157 61.8
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 5.4e-46 188.3 111 75.7
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 7.1e-46 188.0 175 56.6
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 2.1e-45 186.4 145 62.8
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 2.7e-45 186.0 113 77.0
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 2.7e-45 186.0 163 62.6
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 3.0e-44 182.6 111 73.0
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 3.9e-44 182.2 111 73.0
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 5.1e-44 181.8 163 56.4
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 6.6e-44 181.4 172 54.1
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 1.5e-43 180.3 123 69.9
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 1.9e-43 179.9 131 69.5
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 1.9e-43 179.9 174 54.0
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 7.3e-43 177.9 154 59.1
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 9.6e-43 177.6 134 64.2
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 3.6e-42 175.6 134 62.7
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 6.2e-42 174.9 94 84.0
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 8.1e-42 174.5 95 82.1
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 8.1e-42 174.5 202 48.0
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 1.4e-41 173.7 131 63.4
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 2.6e-40 169.5 137 59.1
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 9.9e-40 167.5 86 88.4
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 2.2e-39 166.4 127 63.0
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 3.8e-39 165.6 115 66.1
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 1.4e-38 163.7 174 51.7
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.9e-38 163.3 108 64.8
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 2.4e-38 162.9 120 65.0
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 2.4e-38 162.9 108 68.5
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 1.6e-37 160.2 133 60.9
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 1.1e-35 154.1 77 87.0
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 9.6e-35 151.0 108 70.4
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 2.8e-34 149.4 110 62.7
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 7.1e-30 134.8 125 51.2
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 1.1e-27 127.5 108 53.7
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 2.4e-25 119.8 61 83.6
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 6.9e-25 118.2 137 46.7
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 5.8e-24 115.2 138 44.9
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.8e-12 77.0 80 48.8


User provided reference genes

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