Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10022269m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 4.9e-48 194.1 97 100.0
Thhalv10009348m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.4e-31 138.7 76 89.5
A10p04620 Brassica napus HOM05D000896 ORTHO05D000594 4.3e-20 101.3 73 69.9
BraA10t42727Z Brassica rapa HOM05D000896 ORTHO05D000594 4.3e-20 101.3 73 69.9
C05p04280 Brassica napus HOM05D000896 ORTHO05D000594 2.1e-19 99.0 73 67.1
BolC5t29203H Brassica oleracea HOM05D000896 ORTHO05D000594 2.1e-19 99.0 73 67.1
BcaC05g24319 Brassica carinata HOM05D000896 ORTHO05D000594 3.7e-19 98.2 74 63.5
Sp1g04760 Schrenkiella parvula HOM05D000896 ORTHO05D000594 8.2e-19 97.1 75 61.3
AT1G05920 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 4.5e-17 91.3 71 59.2
AL1G15880 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 8.4e-16 87.0 71 56.3
Carub.0001s0529 Capsella rubella HOM05D000896 ORTHO05D000594 1.1e-15 86.7 67 61.2
AL3G40610 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 6.0e-14 80.9 75 54.7
AL3G40940 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 7.9e-14 80.5 75 54.7
AL3G40220 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 3.0e-13 78.6 75 53.3
AT3G24850 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 3.0e-13 78.6 75 53.3
AT5G24050 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 5.1e-13 77.8 75 53.3
A10p04160 Brassica napus HOM05D000896 ORTHO05D000594 1.1e-12 76.6 80 47.5
Carub.0003s2555 Capsella rubella HOM05D000896 ORTHO05D000594 1.5e-12 76.3 75 52.0
BraA10t42685Z Brassica rapa HOM05D000896 ORTHO05D000594 2.5e-12 75.5 80 47.5
Carub.0001s0530 Capsella rubella HOM05D000896 ORTHO05D000594 3.3e-12 75.1 71 53.5
Thhalv10029471m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 3.3e-12 75.1 75 49.3
BcaB07g31212 Brassica carinata HOM05D000896 ORTHO05D000594 4.3e-12 74.7 72 55.6
AL26U10040 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 5.7e-12 74.3 76 51.3
BcaB02g06859 Brassica carinata HOM05D000896 ORTHO05D000594 5.7e-12 74.3 80 48.8
BcaC05g24385 Brassica carinata HOM05D000896 ORTHO05D000594 7.4e-12 73.9 82 47.6
A09p17570 Brassica napus HOM05D000896 ORTHO05D000594 7.4e-12 73.9 72 54.2
C05p03790 Brassica napus HOM05D000896 ORTHO05D000594 7.4e-12 73.9 82 47.6
BolC5t29156H Brassica oleracea HOM05D000896 ORTHO05D000594 7.4e-12 73.9 82 47.6
BraA09t37387Z Brassica rapa HOM05D000896 ORTHO05D000594 7.4e-12 73.9 72 54.2
BcaC04g22224 Brassica carinata HOM05D000896 ORTHO05D000594 9.7e-12 73.6 72 54.2
C09p21870 Brassica napus HOM05D000896 ORTHO05D000594 9.7e-12 73.6 72 54.2
BolC9t55092H Brassica oleracea HOM05D000896 ORTHO05D000594 9.7e-12 73.6 72 54.2
AL1G15890 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 6.3e-11 70.9 72 50.0
BolC1t01330H Brassica oleracea HOM05D000896 ORTHO05D000594 6.3e-11 70.9 72 52.8
Thhalv10029136m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 8.2e-11 70.5 71 47.9
A09p34210 Brassica napus HOM05D000896 ORTHO05D000594 1.4e-10 69.7 85 44.7
BraA09t38969Z Brassica rapa HOM05D000896 ORTHO05D000594 1.4e-10 69.7 85 44.7
CARHR101530 Cardamine hirsuta HOM05D000896 ORTHO05D000594 4.1e-10 68.2 75 49.3
Thhalv10029259m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 4.1e-10 68.2 75 44.0
SpUn1102_0010 Schrenkiella parvula HOM05D000896 ORTHO05D000594 9.0e-10 67.0 75 45.3
C05p31330 Brassica napus HOM05D000896 ORTHO05D000594 1.5e-09 66.2 71 45.1
BcaC05g27223 Brassica carinata HOM05D000896 ORTHO05D000594 2.0e-09 65.9 85 42.4
BolC5t31856H Brassica oleracea HOM05D000896 ORTHO05D000594 2.0e-09 65.9 85 42.4
AT1G32030 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 5.9e-09 64.3 75 49.3
CARHR217360 Cardamine hirsuta HOM05D000896 ORTHO05D000594 1.7e-08 62.8 70 44.3
AL1G46070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.2e-08 62.4 75 45.3
AL5G29460 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.9e-08 62.0 78 41.0
BcaB07g32861 Brassica carinata HOM05D000896 ORTHO05D000594 2.9e-08 62.0 71 43.7
Sp1g04320 Schrenkiella parvula HOM05D000896 ORTHO05D000594 2.9e-08 62.0 70 41.4
AL7G25460 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 5.0e-08 61.2 75 40.0
AT1G05930 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.4e-07 59.7 72 45.8
Carub.0007s1353 Capsella rubella HOM05D000896 ORTHO05D000594 1.4e-07 59.7 76 38.2
AT3G49610 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 7.2e-07 57.4 82 39.0
Thhalv10009508m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 1.6e-06 56.2 87 36.8
AT5G38490 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 2.7e-06 55.5 73 41.1
AL7G52080 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 3.6e-06 55.1 76 42.1
Sp6g07490 Schrenkiella parvula HOM05D000896 ORTHO05D000594 3.6e-06 55.1 75 37.3
Carub.0007s3741 Capsella rubella HOM05D000896 ORTHO05D000594 6.1e-06 54.3 73 39.7
Thhalv10029469m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 7.9e-06 53.9 71 36.6


User provided reference genes

Program Settings