Gene: AT1G05920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G05920
  • Transcript Identifier AT1G05920.1
  • Gene Type Coding gene
  • Location Chr1 : 1797044-1797991 : positive

Gene Family Information

  • ID HOM05D000896
  • #Genes/#Species 669/71
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G05920.1
  • uniprot Q5RM09

Descriptions

  • Description B3 domain protein (DUF313)
  • Computational description FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF313 (InterPro:IPR005508), Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF313) (TAIR:AT3G24850.1); Has 196 Blast hits to 185 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 15; Fungi - 10; Plants - 139; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005508 B3 domain-containing protein At2g31720-like
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR003340 B3 DNA binding domain
Mapman id Description
15.5.5.2 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (REM)