Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014980m.g Eutrema salsugineum HOM05D004834 ORTHO05D006247 1.9e-74 282.3 138 100.0
Sp6g36280 Schrenkiella parvula HOM05D004834 ORTHO05D006247 4.1e-32 141.7 109 66.1
Thhalv10013121m.g Eutrema salsugineum HOM05D004834 ORTHO05D006247 1.2e-31 140.2 113 62.8
AT5G06580 Arabidopsis thaliana HOM05D004834 ORTHO05D006247 2.7e-31 139.0 106 66.0
A10p29810 Brassica napus HOM05D004834 ORTHO05D006247 2.7e-31 139.0 105 68.6
BraA10t45020Z Brassica rapa HOM05D004834 ORTHO05D006247 2.7e-31 139.0 105 68.6
CARHR206620 Cardamine hirsuta HOM05D004834 ORTHO05D006247 3.5e-31 138.7 106 66.0
Aa31sc167G60 Aethionema arabicum HOM05D004834 ORTHO05D006247 5.9e-31 137.9 106 65.1
AL6G16670 Arabidopsis lyrata HOM05D004834 ORTHO05D006247 7.7e-31 137.5 106 66.0
BolC9t59763H Brassica oleracea HOM05D004834 ORTHO05D006247 7.7e-31 137.5 105 67.6
Carub.0006s0546 Capsella rubella HOM05D004834 ORTHO05D006247 1.0e-30 137.1 106 66.0
C09p70190 Brassica napus HOM05D004834 ORTHO05D006247 2.3e-30 136.0 105 66.7
THA.LOC104799266 Tarenaya hassleriana HOM05D004834 ORTHO05D006247 4.2e-29 131.7 121 54.5
Dinv11906 Davidia involucrata HOM05D004834 ORTHO05D006247 1.2e-28 130.2 106 60.4
CSS0012663 Camellia sinensis var. sinensis HOM05D004834 ORTHO05D006247 1.6e-28 129.8 106 60.4
Thecc.05G183400 Theobroma cacao HOM05D004834 ORTHO05D006247 1.6e-28 129.8 106 59.4
Actinidia03850 Actinidia chinensis HOM05D004834 ORTHO05D006247 2.8e-28 129.0 106 60.4
arahy.Tifrunner.gnm1.ann1.5D1K5R Arachis hypogaea HOM05D004834 ORTHO05D006247 4.7e-28 128.3 113 56.6
arahy.Tifrunner.gnm1.ann1.5D1JVS Arachis hypogaea HOM05D004834 ORTHO05D006247 6.1e-28 127.9 113 55.8
Cpa.g.sc222.7 Carica papaya HOM05D004834 ORTHO05D006247 8.0e-28 127.5 106 58.5
Gohir.A09G131900 Gossypium hirsutum HOM05D004834 ORTHO05D006247 8.0e-28 127.5 106 58.5
Gorai.006G146800 Gossypium raimondii HOM05D004834 ORTHO05D006247 8.0e-28 127.5 106 58.5
Hma1.2p1_0304F.1_g119280 Hydrangea macrophylla HOM05D004834 ORTHO05D006247 8.0e-28 127.5 106 59.4
Aqoxy1G00576 Aquilegia oxysepala HOM05D004834 ORTHO05D006247 1.0e-27 127.1 106 58.5
Ca_09087_v3 Cicer arietinum L. HOM05D004834 ORTHO05D006247 1.4e-27 126.7 113 54.9
COL.COLO4_29472 Corchorus olitorius HOM05D004834 ORTHO05D006247 1.4e-27 126.7 106 58.5
Lsat_1_v5_gn_2_102000 Lactuca sativa HOM05D004834 ORTHO05D006247 1.4e-27 126.7 106 59.4
Gohir.D09G128200 Gossypium hirsutum HOM05D004834 ORTHO05D006247 1.8e-27 126.3 106 57.5
Nitab4.5_0000117g0020 Nicotiana tabacum HOM05D004834 ORTHO05D006247 1.8e-27 126.3 108 58.3
Nitab4.5_0000670g0060 Nicotiana tabacum HOM05D004834 ORTHO05D006247 1.8e-27 126.3 108 58.3
vmacro07523 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 1.8e-27 126.3 112 57.1
Migut.J00722 Erythranthe guttata HOM05D004834 ORTHO05D006247 2.3e-27 125.9 113 54.9
Nn2g14430 Nelumbo nucifera HOM05D004834 ORTHO05D006247 2.3e-27 125.9 106 59.4
SalBow1G1939 Salvia bowleyana HOM05D004834 ORTHO05D006247 2.3e-27 125.9 113 53.1
CSS0029343 Camellia sinensis var. sinensis HOM05D004834 ORTHO05D006247 3.0e-27 125.6 106 58.5
Eucgr.A02536 Eucalyptus grandis HOM05D004834 ORTHO05D006247 3.0e-27 125.6 113 55.8
TAR636G2709 Trochodendron aralioides HOM05D004834 ORTHO05D006247 4.0e-27 125.2 106 59.4
CiPaw.09G024600 Carya illinoinensis HOM05D004834 ORTHO05D006247 5.2e-27 124.8 106 57.5
DCAR_013465 Daucus carota HOM05D004834 ORTHO05D006247 5.2e-27 124.8 108 57.4
Potri.016G064800 Populus trichocarpa HOM05D004834 ORTHO05D006247 5.2e-27 124.8 106 58.5
MELO3C009581.2 Cucumis melo HOM05D004834 ORTHO05D006247 6.8e-27 124.4 108 57.4
MBI11_g39498_MAGBIO Magnolia biondii HOM05D004834 ORTHO05D006247 6.8e-27 124.4 114 55.3
Sopen11g020840 Solanum pennellii HOM05D004834 ORTHO05D006247 6.8e-27 124.4 106 59.4
PGSC0003DMG403008663 Solanum tuberosum HOM05D004834 ORTHO05D006247 6.8e-27 124.4 106 59.4
Haze_20096 Corylus avellana HOM05D004834 ORTHO05D006247 8.9e-27 124.0 106 58.5
ECA238G0502 Erigeron canadensis HOM05D004834 ORTHO05D006247 8.9e-27 124.0 106 57.5
Medtr7g107050 Medicago truncatula HOM05D004834 ORTHO05D006247 8.9e-27 124.0 106 56.6
Sed0002421 Sechium edule HOM05D004834 ORTHO05D006247 8.9e-27 124.0 108 57.4
HanXRQChr14g0453201 Helianthus annuus HOM05D004834 ORTHO05D006247 1.2e-26 123.6 106 57.5
Psat3g026160 Pisum sativum HOM05D004834 ORTHO05D006247 1.2e-26 123.6 113 53.1
Prupe.7G088900 Prunus persica HOM05D004834 ORTHO05D006247 1.2e-26 123.6 106 57.5
Lalb_Chr20g0111191 Lupinus albus HOM05D004834 ORTHO05D006247 1.5e-26 123.2 106 56.6
QL07p026110 Quercus lobata HOM05D004834 ORTHO05D006247 1.5e-26 123.2 106 56.6
Atru.chr8.1261 Acer truncatum HOM05D004834 ORTHO05D006247 2.0e-26 122.9 108 57.4
MSTRG.19322 Avicennia marina HOM05D004834 ORTHO05D006247 2.0e-26 122.9 112 54.5
Peaxi162Scf00210g00225 Petunia axillaris HOM05D004834 ORTHO05D006247 2.6e-26 122.5 106 57.5
Rhsim03G0058100 Rhododendron simsii HOM05D004834 ORTHO05D006247 2.6e-26 122.5 113 54.0
GSVIVG01022507001 Vitis vinifera HOM05D004834 ORTHO05D006247 2.6e-26 122.5 106 58.5
Lj1g0003379 Lotus japonicus HOM05D004834 ORTHO05D006247 3.4e-26 122.1 106 56.6
Manes.09G041400 Manihot esculenta HOM05D004834 ORTHO05D006247 3.4e-26 122.1 106 56.6
Solyc11g045370.1 Solanum lycopersicum HOM05D004834 ORTHO05D006247 3.4e-26 122.1 105 59.0
Oeu063072.1 Olea europaea HOM05D004834 ORTHO05D006247 4.4e-26 121.7 105 55.2
Prupe.7G088800 Prunus persica HOM05D004834 ORTHO05D006247 4.4e-26 121.7 106 56.6
HPP92_012150 Vanilla planifolia HOM05D004834 ORTHO05D006247 4.4e-26 121.7 108 51.9
CsaV3_3G038380 Cucumis sativus L. HOM05D004834 ORTHO05D006247 5.7e-26 121.3 105 57.1
EL10Ac5g11795 Beta vulgaris HOM05D004834 ORTHO05D006247 9.8e-26 120.6 106 55.7
CAN.G409.3 Capsicum annuum HOM05D004834 ORTHO05D006247 9.8e-26 120.6 105 57.1
PSO339G5030 Papaver somniferum HOM05D004834 ORTHO05D006247 9.8e-26 120.6 106 54.7
PSO384G0426 Papaver somniferum HOM05D004834 ORTHO05D006247 9.8e-26 120.6 112 53.6
RcHm_v2.0_Chr3g0477531 Rosa chinensis HOM05D004834 ORTHO05D006247 9.8e-26 120.6 108 55.6
Sabra16G0066600 Salix brachista HOM05D004834 ORTHO05D006247 9.8e-26 120.6 102 59.8
SGA_v2.0_scaffold112G31558 Striga asiatica HOM05D004834 ORTHO05D006247 9.8e-26 120.6 113 51.3
Glyma.03G205500 Glycine max HOM05D004834 ORTHO05D006247 1.3e-25 120.2 148 45.3
Os07g0163000 Oryza sativa ssp. japonica HOM05D004834 ORTHO05D006247 1.3e-25 120.2 108 50.9
TPR.G14400 Trifolium pratense HOM05D004834 ORTHO05D006247 1.3e-25 120.2 106 55.7
TWI53G0913 Tripterygium wilfordii HOM05D004834 ORTHO05D006247 1.3e-25 120.2 131 49.6
Cfa020095 Carpinus fangiana HOM05D004834 ORTHO05D006247 1.7e-25 119.8 102 58.8
Ciclev10011373m.g Citrus clementina HOM05D004834 ORTHO05D006247 1.7e-25 119.8 106 53.8
TAR633G1355 Trochodendron aralioides HOM05D004834 ORTHO05D006247 1.7e-25 119.8 106 55.7
Hund10783 Selenicereus undatus HOM05D004834 ORTHO05D006247 2.2e-25 119.4 116 51.7
Phvul.001G199000 Phaseolus vulgaris HOM05D004834 ORTHO05D006247 2.9e-25 119.0 106 54.7
Ah.02g115150 Amaranthus hybridus HOM05D004834 ORTHO05D006247 6.3e-25 117.9 106 55.7
CANSAT64G0017 Cannabis sativa HOM05D004834 ORTHO05D006247 6.3e-25 117.9 106 55.7
MD12G1046700 Malus domestica HOM05D004834 ORTHO05D006247 6.3e-25 117.9 141 44.7
VMungo1383G2386 Vigna mungo HOM05D004834 ORTHO05D006247 6.3e-25 117.9 106 53.8
CANSAT64G2176 Cannabis sativa HOM05D004834 ORTHO05D006247 1.1e-24 117.1 106 55.7
Cc06_g07030 Coffea canephora HOM05D004834 ORTHO05D006247 1.1e-24 117.1 106 52.8
Oeu035654.3 Olea europaea HOM05D004834 ORTHO05D006247 1.1e-24 117.1 106 52.8
Sc01g0005240 Simmondsia chinensis HOM05D004834 ORTHO05D006247 1.4e-24 116.7 106 53.8
unitig_26.g9147 Utricularia gibba HOM05D004834 ORTHO05D006247 2.4e-24 115.9 148 43.9
ATR0697G015 Amborella trichopoda HOM05D004834 ORTHO05D006247 3.2e-24 115.5 108 50.9
AUR62036303 Chenopodium quinoa HOM05D004834 ORTHO05D006247 4.1e-24 115.2 132 49.2
MD12G1046600 Malus domestica HOM05D004834 ORTHO05D006247 4.1e-24 115.2 106 52.8
FvH4_6g21120 Fragaria vesca HOM05D004834 ORTHO05D006247 5.4e-24 114.8 108 54.6
FAN02G4310 Fragaria x ananassa HOM05D004834 ORTHO05D006247 5.4e-24 114.8 108 54.6
FAN05G2138 Fragaria x ananassa HOM05D004834 ORTHO05D006247 5.4e-24 114.8 108 54.6
FAN05G4019 Fragaria x ananassa HOM05D004834 ORTHO05D006247 5.4e-24 114.8 108 54.6
FAN14G4987 Fragaria x ananassa HOM05D004834 ORTHO05D006247 5.4e-24 114.8 108 54.6
AUR62038413 Chenopodium quinoa HOM05D004834 ORTHO05D006247 7.0e-24 114.4 106 52.8
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 1.0e-22 110.5 104 51.0
vmacro07522 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 3.9e-22 108.6 128 47.7
vmacro07525 Vaccinium macrocarpon HOM05D004834 ORTHO05D006247 3.9e-22 108.6 128 47.7
AagrBONN_evm.TU.Sc2ySwM_228.4653 Anthoceros agrestis HOM05D004834 ORTHO05D006247 3.4e-18 95.5 113 40.7
Rhsim03G0058000 Rhododendron simsii HOM05D004834 ORTHO05D006247 1.3e-17 93.6 85 52.9
Mapoly0056s0055 Marchantia polymorpha HOM05D004834 ORTHO05D006247 8.3e-17 90.9 163 35.0
Pp3c24_4090 Physcomitrium patens HOM05D004834 ORTHO05D006247 1.4e-16 90.1 107 40.2
PGSC0003DMG401008663 Solanum tuberosum HOM05D004834 ORTHO05D006247 1.9e-16 89.7 49 81.6
Pp3c20_18170 Physcomitrium patens HOM05D004834 ORTHO05D006247 3.3e-13 79.0 125 36.0
CBR_g48275 Chara braunii HOM05D004834 ORTHO05D006247 1.1e-11 73.9 107 39.3
QL07p026057 Quercus lobata HOM05D004834 ORTHO05D006247 2.6e-10 69.3 46 67.4
Dinv25086 Davidia involucrata HOM05D004834 ORTHO05D006247 4.4e-10 68.6 33 84.8
Glyma.19G202951 Glycine max HOM05D004834 ORTHO05D006247 8.3e-09 64.3 32 78.1
QL07p026067 Quercus lobata HOM05D004834 ORTHO05D006247 3.5e-07 58.9 77 41.6
Duzib093G1706 Durio zibethinus HOM05D004834 ORTHO05D006247 5.1e-06 55.1 42 57.1


User provided reference genes

Program Settings