Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 6.8e-70 267.3 144 100.0
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 9.8e-61 236.9 145 88.3
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 2.2e-60 235.7 145 88.3
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 6.3e-60 234.2 141 89.4
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 3.1e-59 231.9 141 89.4
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 2.3e-57 225.7 138 88.4
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 2.3e-57 225.7 138 88.4
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 2.3e-57 225.7 138 88.4
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 5.0e-57 224.6 139 88.5
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 5.0e-57 224.6 139 88.5
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 4.7e-55 218.0 145 83.4
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 1.6e-50 203.0 136 78.7
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 2.1e-42 176.0 135 67.4
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.4e-38 163.3 136 62.5
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 1.8e-38 162.9 140 63.6
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.8e-38 162.9 127 66.9
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 5.2e-38 161.4 123 67.5
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 5.2e-38 161.4 142 64.8
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.2e-37 160.2 144 61.8
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 1.2e-37 160.2 144 61.8
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 1.2e-37 160.2 132 68.2
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 1.5e-37 159.8 125 67.2
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 4.4e-37 158.3 138 60.9
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 4.4e-37 158.3 117 67.5
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 4.4e-37 158.3 144 61.1
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 5.8e-37 157.9 125 66.4
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 7.5e-37 157.5 140 63.6
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 9.9e-37 157.1 111 69.4
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 9.9e-37 157.1 125 66.4
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 9.9e-37 157.1 122 67.2
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 1.3e-36 156.8 125 66.4
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 3.7e-36 155.2 131 63.4
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 6.4e-36 154.5 125 65.6
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 8.3e-36 154.1 117 66.7
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 1.1e-35 153.7 131 61.1
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.4e-35 153.3 113 66.4
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 1.9e-35 152.9 125 65.6
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 3.2e-35 152.1 133 61.7
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 3.2e-35 152.1 133 61.7
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 4.1e-35 151.8 146 58.9
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 9.2e-35 150.6 125 64.8
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 2.1e-34 149.4 140 56.4
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 2.1e-34 149.4 136 60.3
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 2.7e-34 149.1 139 57.6
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 3.5e-34 148.7 119 65.5
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 3.5e-34 148.7 130 60.8
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 4.6e-34 148.3 122 62.3
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 6.0e-34 147.9 133 57.9
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 6.0e-34 147.9 127 62.2
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 7.8e-34 147.5 138 57.2
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 7.8e-34 147.5 134 61.9
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 1.0e-33 147.1 129 61.2
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.0e-33 147.1 127 62.2
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.3e-33 146.7 140 60.7
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 3.9e-33 145.2 112 64.3
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 3.9e-33 145.2 130 60.0
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 6.6e-33 144.4 126 59.5
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 8.6e-33 144.1 135 58.5
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.1e-32 143.7 136 61.0
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 1.9e-32 142.9 100 80.0
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.5e-32 142.5 115 63.5
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 3.3e-32 142.1 134 61.2
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 3.3e-32 142.1 140 56.4
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 4.3e-32 141.7 133 57.1
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 9.5e-32 140.6 117 62.4
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 9.5e-32 140.6 127 55.1
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 1.2e-31 140.2 127 55.9
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.1e-31 139.4 112 64.3
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 4.7e-31 138.3 127 55.1
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 6.2e-31 137.9 127 57.5
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 6.2e-31 137.9 133 55.6
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 1.8e-30 136.3 140 55.7
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 3.1e-30 135.6 158 50.6
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 4.0e-30 135.2 113 63.7
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 4.0e-30 135.2 127 54.3
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 5.2e-30 134.8 113 62.8
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 1.2e-29 133.7 128 56.2
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 2.6e-29 132.5 112 60.7
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 3.4e-29 132.1 114 60.5
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 3.4e-29 132.1 118 59.3
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 3.4e-29 132.1 113 61.9
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 4.4e-29 131.7 164 49.4
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 5.8e-29 131.3 115 60.0
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 9.9e-29 130.6 113 61.1
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 2.9e-28 129.0 119 58.8
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 3.8e-28 128.6 117 60.7
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 4.9e-28 128.3 134 56.7
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 6.4e-28 127.9 129 55.8
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 8.4e-28 127.5 119 58.8
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 3.2e-27 125.6 112 60.7
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 2.7e-26 122.5 112 58.9
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 3.5e-26 122.1 135 52.6
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 1.0e-25 120.6 96 66.7
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 1.7e-25 119.8 79 83.5
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 5.1e-25 118.2 98 62.2
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.3e-24 115.5 89 64.0
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 5.6e-24 114.8 80 67.5
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 5.6e-24 114.8 80 67.5
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 9.6e-24 114.0 89 62.9
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 4.7e-23 111.7 111 51.4
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 6.2e-23 111.3 109 53.2
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 2.4e-22 109.4 86 65.1
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 5.2e-22 108.2 144 50.7
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 9.0e-22 107.5 75 68.0
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 9.9e-21 104.0 141 46.1
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 1.7e-20 103.2 79 62.0
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 2.4e-19 99.4 117 46.2
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 7.8e-18 94.4 67 70.1
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 2.3e-17 92.8 80 58.8
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 1.4e-14 83.6 130 41.5
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.4e-14 82.8 67 65.7
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 2.9e-12 75.9 103 40.8
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 3.3e-08 62.4 95 43.2
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 1.1e-06 57.4 51 58.8
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 1.4e-06 57.0 39 66.7
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 6.9e-06 54.7 58 50.0


User provided reference genes

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