Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10014372m.g Eutrema salsugineum HOM05D005944 ORTHO05D007188 1.3e-159 566.2 273 100.0
Carub.0006s1010 Capsella rubella HOM05D005944 ORTHO05D007188 7.9e-136 487.3 276 86.6
AL6G22330 Arabidopsis lyrata HOM05D005944 ORTHO05D007188 1.6e-133 479.6 274 84.7
AT5G11620 Arabidopsis thaliana HOM05D005944 ORTHO05D007188 7.1e-129 464.2 275 83.3
CARHR201600 Cardamine hirsuta HOM05D005944 ORTHO05D007188 1.2e-128 463.4 277 84.1
Sp6g32000 Schrenkiella parvula HOM05D005944 ORTHO05D007188 7.9e-128 460.7 274 82.8
BolC9t59349H Brassica oleracea HOM05D005944 ORTHO05D007188 1.9e-126 456.1 280 83.9
BcaC04g19210 Brassica carinata HOM05D005944 ORTHO05D007188 4.3e-126 454.9 280 83.6
C09p65200 Brassica napus HOM05D005944 ORTHO05D007188 4.3e-126 454.9 280 83.6
A10p26150 Brassica napus HOM05D005944 ORTHO05D007188 2.8e-125 452.2 280 83.6
BraA10t44674Z Brassica rapa HOM05D005944 ORTHO05D007188 2.8e-125 452.2 280 83.6
BcaB08g37038 Brassica carinata HOM05D005944 ORTHO05D007188 5.9e-123 444.5 279 80.6
Aa31LG3G15570 Aethionema arabicum HOM05D005944 ORTHO05D007188 3.3e-102 375.6 283 70.3
THA.LOC104799702 Tarenaya hassleriana HOM05D005944 ORTHO05D007188 1.1e-92 344.0 276 65.2
QL12p041319 Quercus lobata HOM05D005944 ORTHO05D007188 3.0e-58 229.6 264 50.0
Manes.16G075200 Manihot esculenta HOM05D005944 ORTHO05D007188 1.9e-57 226.9 263 50.6
Potri.006G238000 Populus trichocarpa HOM05D005944 ORTHO05D007188 1.6e-56 223.8 278 47.1
Cpa.g.sc78.4 Carica papaya HOM05D005944 ORTHO05D007188 2.8e-56 223.0 269 47.2
Nn8g39119 Nelumbo nucifera HOM05D005944 ORTHO05D007188 2.8e-56 223.0 276 47.1
VMungo1309G1803 Vigna mungo HOM05D005944 ORTHO05D007188 3.6e-56 222.6 242 48.3
TPR.G15103 Trifolium pratense HOM05D005944 ORTHO05D007188 1.1e-55 221.1 271 45.4
Psat5g021160 Pisum sativum HOM05D005944 ORTHO05D007188 3.1e-55 219.5 268 44.8
Prupe.1G447700 Prunus persica HOM05D005944 ORTHO05D007188 3.1e-55 219.5 269 46.8
Phvul.009G110100 Phaseolus vulgaris HOM05D005944 ORTHO05D007188 5.2e-55 218.8 242 47.1
CANSAT25G1052 Cannabis sativa HOM05D005944 ORTHO05D007188 8.9e-55 218.0 243 49.0
MD08G1113400 Malus domestica HOM05D005944 ORTHO05D007188 8.9e-55 218.0 272 45.6
CiPaw.08G026000 Carya illinoinensis HOM05D005944 ORTHO05D007188 1.5e-54 217.2 272 44.5
Ca_15588_v3 Cicer arietinum L. HOM05D005944 ORTHO05D007188 2.6e-54 216.5 267 45.3
PGR031G3052 Punica granatum HOM05D005944 ORTHO05D007188 4.4e-54 215.7 264 47.3
vmacro23277 Vaccinium macrocarpon HOM05D005944 ORTHO05D007188 4.4e-54 215.7 272 45.6
CSS0001771 Camellia sinensis var. sinensis HOM05D005944 ORTHO05D007188 1.3e-53 214.2 272 46.0
Lalb_Chr11g0064511 Lupinus albus HOM05D005944 ORTHO05D007188 1.3e-53 214.2 265 45.7
Cfa013369 Carpinus fangiana HOM05D005944 ORTHO05D007188 1.7e-53 213.8 263 47.1
Glyma.06G086100 Glycine max HOM05D005944 ORTHO05D007188 2.2e-53 213.4 240 47.9
Ciclev10009275m.g Citrus clementina HOM05D005944 ORTHO05D007188 2.9e-53 213.0 265 46.4
Eucgr.C00599 Eucalyptus grandis HOM05D005944 ORTHO05D007188 3.7e-53 212.6 242 47.1
MBI01_g42891_MAGBIO Magnolia biondii HOM05D005944 ORTHO05D007188 4.9e-53 212.2 249 46.6
TAR626G0255 Trochodendron aralioides HOM05D005944 ORTHO05D007188 8.3e-53 211.5 269 47.6
Haze_21893 Corylus avellana HOM05D005944 ORTHO05D007188 1.1e-52 211.1 263 46.4
Sc09g0009310 Simmondsia chinensis HOM05D005944 ORTHO05D007188 1.4e-52 210.7 275 44.4
MSTRG.11696 Avicennia marina HOM05D005944 ORTHO05D007188 2.4e-52 209.9 265 47.5
Medtr3g109690 Medicago truncatula HOM05D005944 ORTHO05D007188 2.4e-52 209.9 241 45.2
Thecc.09G045700 Theobroma cacao HOM05D005944 ORTHO05D007188 2.4e-52 209.9 267 43.4
Duzib168G0738 Durio zibethinus HOM05D005944 ORTHO05D007188 3.2e-52 209.5 243 46.9
COL.COLO4_20974 Corchorus olitorius HOM05D005944 ORTHO05D007188 5.4e-52 208.8 239 46.9
Lj1g0013558 Lotus japonicus HOM05D005944 ORTHO05D007188 7.1e-52 208.4 245 47.8
Rhsim07G0147000 Rhododendron simsii HOM05D005944 ORTHO05D007188 1.2e-51 207.6 263 45.2
Sabra06G0186300 Salix brachista HOM05D005944 ORTHO05D007188 1.2e-51 207.6 281 45.9
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla HOM05D005944 ORTHO05D007188 4.6e-51 205.7 262 44.7
MD15G1092800 Malus domestica HOM05D005944 ORTHO05D007188 4.6e-51 205.7 231 51.5
Oeu031102.1 Olea europaea HOM05D005944 ORTHO05D007188 6.0e-51 205.3 262 45.0
TWI34G0404 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 1.0e-50 204.5 265 43.8
CiPaw.07G203800 Carya illinoinensis HOM05D005944 ORTHO05D007188 3.0e-50 203.0 274 45.3
Migut.A00199 Erythranthe guttata HOM05D005944 ORTHO05D007188 3.0e-50 203.0 277 44.4
PSO173G0044 Papaver somniferum HOM05D005944 ORTHO05D007188 3.0e-50 203.0 267 44.2
Cc08_g09670 Coffea canephora HOM05D005944 ORTHO05D007188 6.6e-50 201.8 262 44.7
TWI63G0268 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 1.9e-49 200.3 264 43.6
Sc09g0009320 Simmondsia chinensis HOM05D005944 ORTHO05D007188 2.5e-49 199.9 275 43.6
MELO3C011137.2 Cucumis melo HOM05D005944 ORTHO05D007188 4.3e-49 199.1 263 44.9
Gorai.010G106200 Gossypium raimondii HOM05D005944 ORTHO05D007188 4.3e-49 199.1 245 44.5
Aqoxy7G01465 Aquilegia oxysepala HOM05D005944 ORTHO05D007188 5.6e-49 198.7 239 46.9
Gohir.D06G092200 Gossypium hirsutum HOM05D005944 ORTHO05D007188 5.6e-49 198.7 245 44.5
Peaxi162Scf00227g00915 Petunia axillaris HOM05D005944 ORTHO05D007188 5.6e-49 198.7 262 42.7
Gohir.A06G092600 Gossypium hirsutum HOM05D005944 ORTHO05D007188 7.3e-49 198.4 245 44.5
DCAR_003123 Daucus carota HOM05D005944 ORTHO05D007188 9.6e-49 198.0 268 41.4
Solyc08g066550.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 1.8e-47 193.7 263 44.9
Zm00001eb384710 Zea mays HOM05D005944 ORTHO05D007188 3.1e-47 193.0 240 44.2
Lsat_1_v5_gn_5_33661 Lactuca sativa HOM05D005944 ORTHO05D007188 4.0e-47 192.6 240 43.3
Sopen08g020390 Solanum pennellii HOM05D005944 ORTHO05D007188 4.0e-47 192.6 262 45.0
Nitab4.5_0001567g0220 Nicotiana tabacum HOM05D005944 ORTHO05D007188 6.8e-47 191.8 258 44.2
PGSC0003DMG400002225 Solanum tuberosum HOM05D005944 ORTHO05D007188 6.8e-47 191.8 261 44.1
Nitab4.5_0003794g0090 Nicotiana tabacum HOM05D005944 ORTHO05D007188 2.0e-46 190.3 265 42.6
ECA246G4186 Erigeron canadensis HOM05D005944 ORTHO05D007188 3.4e-46 189.5 252 41.3
Atru.chr7.2083 Acer truncatum HOM05D005944 ORTHO05D007188 4.4e-46 189.1 269 43.9
PGSC0003DMG400018561 Solanum tuberosum HOM05D005944 ORTHO05D007188 7.6e-46 188.3 260 43.8
SalBow4G1457 Salvia bowleyana HOM05D005944 ORTHO05D007188 1.3e-45 187.6 241 48.1
HanXRQChr08g0234421 Helianthus annuus HOM05D005944 ORTHO05D007188 2.9e-45 186.4 242 43.4
Sed0020456 Sechium edule HOM05D005944 ORTHO05D007188 6.4e-45 185.3 258 43.8
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 8.4e-45 184.9 260 43.8
Nitab4.5_0000664g0190 Nicotiana tabacum HOM05D005944 ORTHO05D007188 2.7e-43 179.9 279 38.7
Sed0026395 Sechium edule HOM05D005944 ORTHO05D007188 7.8e-43 178.3 235 43.0
SGA_v2.0_scaffold243G44289 Striga asiatica HOM05D005944 ORTHO05D007188 3.0e-42 176.4 246 41.5
EL10Ac2g04013 Beta vulgaris HOM05D005944 ORTHO05D007188 1.1e-41 174.5 238 42.4
Os06g0554100 Oryza sativa ssp. japonica HOM05D005944 ORTHO05D007188 1.9e-41 173.7 249 41.0
Ah.10g034990 Amaranthus hybridus HOM05D005944 ORTHO05D007188 2.5e-41 173.3 239 42.3
unitig_32.g11474 Utricularia gibba HOM05D005944 ORTHO05D007188 2.1e-40 170.2 238 42.9
EL10Ac2g04010 Beta vulgaris HOM05D005944 ORTHO05D007188 2.4e-39 166.8 238 40.8
AUR62039710 Chenopodium quinoa HOM05D005944 ORTHO05D007188 2.6e-38 163.3 253 39.9
HPP92_024066 Vanilla planifolia HOM05D005944 ORTHO05D007188 7.6e-38 161.8 275 38.2
AUR62009271 Chenopodium quinoa HOM05D005944 ORTHO05D007188 2.9e-37 159.8 240 39.2
TWI63G1513 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 6.4e-37 158.7 213 41.8
ECA233G3370 Erigeron canadensis HOM05D005944 ORTHO05D007188 8.4e-37 158.3 228 40.4
AUR62011965 Chenopodium quinoa HOM05D005944 ORTHO05D007188 5.4e-36 155.6 246 38.2
HanXRQChr02g0050591 Helianthus annuus HOM05D005944 ORTHO05D007188 2.1e-35 153.7 231 40.3
EL10Ac5g10487 Beta vulgaris HOM05D005944 ORTHO05D007188 1.7e-34 150.6 238 40.3
Glyma.04G084500 Glycine max HOM05D005944 ORTHO05D007188 1.7e-34 150.6 122 61.5
Actinidia14678 Actinidia chinensis HOM05D005944 ORTHO05D007188 3.0e-34 149.8 129 63.6
Ah.02g111320 Amaranthus hybridus HOM05D005944 ORTHO05D007188 5.1e-34 149.1 238 39.1
C02p05290 Brassica napus HOM05D005944 ORTHO05D007188 8.7e-34 148.3 214 45.8
FvH4_2g35480 Fragaria vesca HOM05D005944 ORTHO05D007188 5.6e-33 145.6 205 39.5
RcHm_v2.0_Chr6g0306401 Rosa chinensis HOM05D005944 ORTHO05D007188 5.6e-33 145.6 205 41.0
FAN27G2199 Fragaria x ananassa HOM05D005944 ORTHO05D007188 7.3e-33 145.2 205 39.5
Nitab4.5_0001515g0030 Nicotiana tabacum HOM05D005944 ORTHO05D007188 3.6e-32 142.9 265 35.5
FAN20G0862 Fragaria x ananassa HOM05D005944 ORTHO05D007188 5.3e-31 139.0 242 35.5
Solyc11g071190.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 6.9e-31 138.7 126 56.3
Peaxi162Scf00247g00005 Petunia axillaris HOM05D005944 ORTHO05D007188 9.0e-31 138.3 137 54.7
FAN15G0753 Fragaria x ananassa HOM05D005944 ORTHO05D007188 2.0e-30 137.1 205 38.0
Sopen11g028870 Solanum pennellii HOM05D010581 ORTHO05D012655 4.5e-30 136.0 149 51.7
ATR0561G048 Amborella trichopoda HOM05D005944 ORTHO05D007188 5.8e-30 135.6 261 37.5
HanXRQChr13g0402041 Helianthus annuus HOM05D005944 ORTHO05D007188 5.8e-30 135.6 185 42.2
BolC2t06477H Brassica oleracea HOM05D005944 ORTHO05D007188 2.4e-28 130.2 207 43.0
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 1.2e-27 127.9 258 35.3
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 1.2e-22 111.3 243 31.7
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis HOM05D005944 ORTHO05D007188 2.6e-22 110.2 263 32.7
Zm00001eb277580 Zea mays HOM05D005944 ORTHO05D007188 4.5e-22 109.4 178 39.3
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 5.8e-22 109.0 234 32.5
PSO507G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 1.3e-21 107.8 133 45.9
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 2.2e-21 107.1 258 32.6
SMO244G0014 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 4.9e-21 105.9 235 32.8
Pp3c11_3140 Physcomitrium patens HOM05D005944 ORTHO05D007188 1.6e-19 100.9 289 29.8
SMO281G0003 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 2.1e-19 100.5 227 33.5
Cre09.g393550 Chlamydomonas reinhardtii HOM05D005944 ORTHO05D007188 7.9e-19 98.6 274 30.7
SEGI_16652 Sequoiadendron giganteum HOM05D005944 ORTHO05D007188 1.3e-18 97.8 257 31.1
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 5.7e-17 92.4 223 33.6
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 9.0e-15 85.1 222 31.1
CDE05G1550 Ceratophyllum demersum HOM05D005944 ORTHO05D007188 1.3e-13 81.3 105 38.1
MCO02G382 Micromonas commoda HOM05D005944 ORTHO05D007188 1.6e-11 74.3 220 30.0
A02p01110 Brassica napus HOM05D005944 ORTHO05D007188 9.7e-09 65.1 33 87.9
RcHm_v2.0_Chr6g0306291 Rosa chinensis HOM05D005944 ORTHO05D007188 2.2e-08 63.9 60 50.0
RcHm_v2.0_Chr6g0306281 Rosa chinensis HOM05D005944 ORTHO05D007188 1.5e-06 57.8 41 51.2


User provided reference genes

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