Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 5.6e-111 404.4 227 100.0
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 1.1e-103 380.2 227 86.3
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 1.9e-98 362.8 227 88.5
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 2.4e-98 362.5 227 87.7
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 3.5e-97 358.6 227 88.1
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 3.5e-97 358.6 227 88.1
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 1.7e-96 356.3 227 87.7
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 1.7e-96 356.3 227 87.7
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 1.7e-96 356.3 227 87.7
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 1.7e-96 356.3 227 87.7
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 8.7e-96 354.0 227 83.7
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 5.6e-95 351.3 227 86.8
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 2.1e-94 349.4 225 86.7
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 6.4e-91 337.8 227 85.0
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 4.2e-90 335.1 210 83.3
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 5.1e-88 328.2 227 74.0
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 1.1e-87 327.0 227 75.8
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.5e-87 326.6 227 71.8
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 1.5e-87 326.6 227 71.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 2.5e-87 325.9 227 70.9
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 3.3e-87 325.5 227 71.4
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 1.8e-85 319.7 227 71.8
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 2.4e-85 319.3 227 71.8
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 5.3e-85 318.2 227 73.1
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 5.3e-85 318.2 227 70.9
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 9.0e-85 317.4 227 70.9
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 1.2e-84 317.0 227 68.3
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 1.5e-84 316.6 227 71.8
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 2.0e-84 316.2 227 69.2
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 2.0e-84 316.2 227 70.9
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 2.0e-84 316.2 225 68.9
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 3.4e-84 315.5 227 68.3
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 5.8e-84 314.7 227 69.6
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 7.6e-84 314.3 227 69.6
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 2.9e-83 312.4 227 68.7
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 3.8e-83 312.0 227 67.8
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 6.4e-83 311.2 227 68.7
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 8.4e-83 310.8 227 69.2
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 1.1e-82 310.5 226 67.7
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 1.1e-82 310.5 224 68.8
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 1.9e-82 309.7 227 68.7
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 1.9e-82 309.7 227 68.7
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 2.4e-82 309.3 227 69.2
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 3.2e-82 308.9 227 67.8
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 5.4e-82 308.1 225 70.7
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 5.4e-82 308.1 225 70.7
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 7.1e-82 307.8 227 68.7
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 1.2e-81 307.0 225 70.2
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.1e-81 306.2 227 68.3
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 4.6e-81 305.1 227 67.8
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 4.6e-81 305.1 227 66.1
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 4.6e-81 305.1 227 66.1
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 6.0e-81 304.7 227 67.8
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 7.9e-81 304.3 225 65.3
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 7.9e-81 304.3 227 66.5
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 1.3e-80 303.5 218 68.8
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 2.3e-80 302.8 224 71.9
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 5.1e-80 301.6 224 67.4
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 6.7e-80 301.2 224 66.5
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.9e-79 299.7 224 67.4
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.9e-79 299.7 225 66.7
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 2.5e-79 299.3 227 68.7
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 3.3e-79 298.9 237 64.1
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 4.3e-79 298.5 227 72.2
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 5.6e-79 298.1 227 74.0
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 5.6e-79 298.1 225 74.2
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 9.6e-79 297.4 227 66.5
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 1.3e-78 297.0 227 65.2
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.3e-78 297.0 221 66.1
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.8e-78 295.8 242 62.4
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 3.7e-78 295.4 224 71.9
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 3.7e-78 295.4 228 66.7
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 3.7e-78 295.4 225 65.8
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 3.7e-78 295.4 228 66.2
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 6.2e-78 294.7 224 65.6
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 1.4e-77 293.5 227 65.2
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 4.0e-77 292.0 260 59.6
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 4.0e-77 292.0 227 66.1
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 1.2e-76 290.4 267 58.4
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 3.4e-76 288.9 224 70.1
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 8.4e-75 284.3 221 67.0
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 8.4e-75 284.3 224 69.2
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.4e-74 283.5 232 65.5
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.9e-74 283.1 250 57.6
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 3.2e-74 282.3 227 67.4
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 4.2e-74 282.0 225 60.4
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 9.3e-74 280.8 227 69.2
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.2e-73 280.4 227 69.6
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 5.1e-72 275.0 210 65.7
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 5.7e-71 271.6 195 76.9
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 5.7e-71 271.6 207 66.2
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 5.3e-69 265.0 255 57.3
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 1.5e-68 263.5 194 67.5
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 2.2e-67 259.6 203 63.1
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 4.2e-66 255.4 222 65.8
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 4.2e-66 255.4 222 65.8
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.2e-65 253.8 214 57.9
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 1.3e-64 250.4 222 64.9
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 6.7e-64 248.1 207 58.0
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 4.3e-63 245.4 222 60.8
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 5.3e-61 238.4 213 56.3
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 5.3e-61 238.4 193 60.1
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 2.3e-56 223.0 223 51.1
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 7.4e-55 218.0 221 50.7
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 2.6e-52 209.5 207 51.2
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 7.4e-47 191.4 213 46.5
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 1.2e-41 174.1 139 59.7
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 2.1e-41 173.3 184 52.2
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 1.7e-38 163.7 190 51.6
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 2.0e-36 156.8 199 42.2
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 3.5e-28 129.4 160 49.4
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 2.2e-27 126.7 99 68.7
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 6.8e-24 115.2 81 61.7
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.2e-15 87.8 220 32.3
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 1.4e-13 80.9 200 27.0
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 1.2e-09 67.8 119 44.5
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 3.6e-09 66.2 95 47.4
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 8.0e-09 65.1 35 88.6
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 5.2e-08 62.4 231 26.8


User provided reference genes

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