Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.4e-270 935.6 463 100.0
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.3e-265 918.3 463 97.8
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 3.7e-263 911.0 464 97.2
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.2e-261 906.0 465 96.8
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 6.0e-261 903.7 466 96.4
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.0e-260 902.9 463 96.1
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 2.5e-259 898.3 463 95.5
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 7.3e-259 896.7 463 95.5
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.8e-257 892.1 464 94.8
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 2.7e-253 878.2 465 93.8
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.3e-252 875.9 440 97.3
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.7e-244 849.0 463 89.0
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.9e-230 802.4 463 82.9
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 2.7e-229 798.5 453 84.3
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.8e-228 795.8 459 84.5
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.1e-227 793.1 455 83.5
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.9e-227 792.3 463 82.3
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 2.5e-227 792.0 463 81.9
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 5.7e-227 790.8 464 82.1
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.6e-226 789.3 451 82.3
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.7e-226 788.1 441 83.7
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 8.2e-226 786.9 463 81.4
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 3.1e-225 785.0 463 80.8
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 3.1e-225 785.0 445 83.1
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 3.1e-225 785.0 462 82.0
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.2e-224 783.1 464 82.1
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.5e-224 782.7 433 84.5
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.0e-224 782.3 463 81.6
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.6e-224 781.9 455 82.6
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 3.4e-224 781.6 456 81.4
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 2.9e-223 778.5 463 81.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 3.8e-223 778.1 429 85.5
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 5.0e-223 777.7 460 80.2
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.0e-223 777.7 462 81.4
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.0e-223 777.7 456 81.4
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 6.5e-223 777.3 453 81.9
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 6.5e-223 777.3 463 80.6
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.4e-223 776.9 463 81.2
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 8.4e-223 776.9 458 81.2
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.1e-222 776.5 460 82.0
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.4e-222 776.2 466 80.7
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.4e-222 776.2 454 82.6
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 2.5e-222 775.4 455 81.3
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 3.2e-222 775.0 440 82.5
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 3.2e-222 775.0 440 83.9
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.2e-221 773.1 464 80.2
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.1e-221 772.3 455 80.7
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 3.5e-221 771.5 430 84.4
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 6.1e-221 770.8 458 80.8
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 2.3e-220 768.8 447 80.8
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 2.3e-220 768.8 463 79.7
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 2.3e-220 768.8 430 84.2
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 3.9e-220 768.1 462 80.5
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 5.1e-220 767.7 453 81.2
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 6.7e-220 767.3 454 80.6
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.5e-219 766.1 490 76.7
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.5e-219 766.1 426 84.0
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 3.3e-219 765.0 451 80.9
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.4e-219 763.8 428 84.8
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 9.7e-219 763.5 427 83.8
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.3e-218 763.1 458 81.0
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.6e-218 762.7 442 81.0
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.2e-218 762.3 449 80.8
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 8.2e-218 760.4 481 77.5
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.1e-217 760.0 463 79.3
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 5.3e-217 757.7 429 83.0
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.2e-216 756.5 462 79.7
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.4e-214 749.6 415 84.1
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 2.1e-213 745.7 458 78.8
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 2.7e-213 745.3 421 81.9
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.4e-212 743.0 442 79.4
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.8e-212 742.7 471 76.4
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 3.3e-211 738.4 452 78.3
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 3.1e-209 731.9 451 78.0
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 9.1e-209 730.3 433 80.1
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.3e-207 726.5 423 80.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 3.8e-207 724.9 447 78.3
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 7.2e-206 720.7 401 84.8
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.2e-205 719.9 456 75.4
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 2.3e-204 715.7 401 83.5
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 3.3e-203 711.8 425 79.5
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 7.4e-203 710.7 387 90.2
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.3e-202 709.9 418 79.9
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 4.1e-201 704.9 426 76.8
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.3e-201 704.5 478 74.1
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.3e-199 699.9 517 68.7
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 5.0e-199 698.0 456 72.8
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 7.2e-198 694.1 428 77.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 1.3e-194 683.3 453 73.7
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 2.2e-194 682.6 382 84.6
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.6e-192 676.4 402 81.8
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.0e-191 673.7 493 69.0
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 6.1e-189 664.5 392 80.9
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 6.8e-188 661.0 458 70.5
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 7.5e-187 657.5 562 61.4
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 4.4e-179 631.7 421 70.3
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.4e-177 625.9 357 82.6
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.3e-175 619.4 416 72.8
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.3e-167 592.8 441 63.7
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 6.8e-164 581.3 426 65.0
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.5e-163 580.1 377 76.1
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 6.4e-154 548.1 499 59.9
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.1e-137 494.2 271 86.0
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.7e-136 489.6 374 61.8
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 3.5e-136 489.2 303 78.2
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 1.7e-135 486.9 310 78.1
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.5e-134 483.8 463 56.2
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.2e-115 421.0 243 82.3
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 4.5e-67 259.6 147 82.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 3.1e-60 236.9 190 63.2
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.7e-58 231.1 147 72.8
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 9.8e-38 162.2 102 70.6
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 2.1e-27 127.9 79 73.4
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 1.8e-23 114.8 84 65.5
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 7.8e-19 99.4 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.1e-15 89.0 49 85.7
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.6e-11 73.6 49 67.3
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.0e-11 73.2 42 76.2
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.9e-10 70.5 42 71.4
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 1.8e-07 61.6 40 72.5


User provided reference genes

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