Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10003815m.g Eutrema salsugineum HOM05D005415 ORTHO05D006242 0.0e+00 1162.9 637 100.0
Sp2g26630 Schrenkiella parvula HOM05D005415 ORTHO05D006242 8.2e-269 930.2 643 83.7
BcaB04g19924 Brassica carinata HOM05D005415 ORTHO05D006242 1.1e-265 919.8 642 77.4
AL8G40620 Arabidopsis lyrata HOM05D005415 ORTHO05D006242 1.5e-262 909.4 643 75.7
BcaC04g23337 Brassica carinata HOM05D005415 ORTHO05D006242 5.7e-262 907.5 641 77.1
CARHR277400 Cardamine hirsuta HOM05D005415 ORTHO05D006242 1.7e-261 906.0 647 78.4
C09p09400 Brassica napus HOM05D005415 ORTHO05D006242 1.4e-260 902.9 642 76.9
A09p08330 Brassica napus HOM05D005415 ORTHO05D006242 2.4e-260 902.1 642 76.8
BolC9t53852H Brassica oleracea HOM05D005415 ORTHO05D006242 2.0e-254 882.5 680 72.6
BraA09t36482Z Brassica rapa HOM05D005415 ORTHO05D006242 3.3e-254 881.7 683 72.3
AT5G63540 Arabidopsis thaliana HOM05D005415 ORTHO05D006242 6.5e-250 867.5 650 72.8
Carub.0008s2427 Capsella rubella HOM05D005415 ORTHO05D006242 1.0e-239 833.6 644 70.0
Aa31LG1G18400 Aethionema arabicum HOM05D005415 ORTHO05D006242 1.7e-229 799.7 655 68.2
THA.LOC104798938 Tarenaya hassleriana HOM05D005415 ORTHO05D006242 4.5e-182 642.1 542 64.0
Thecc.03G133700 Theobroma cacao HOM05D005415 ORTHO05D006242 7.5e-137 491.9 538 50.9
Atru.chr6.1849 Acer truncatum HOM05D005415 ORTHO05D006242 2.7e-134 483.4 538 51.7
COL.COLO4_16633 Corchorus olitorius HOM05D005415 ORTHO05D006242 1.2e-131 474.6 638 47.5
Gorai.001G056700 Gossypium raimondii HOM05D005415 ORTHO05D006242 2.7e-131 473.4 541 49.7
Duzib068G0666 Durio zibethinus HOM05D005415 ORTHO05D006242 8.0e-131 471.9 626 45.4
Gohir.D07G053600 Gossypium hirsutum HOM05D005415 ORTHO05D006242 3.0e-130 469.9 541 49.5
Dinv11193 Davidia involucrata HOM05D005415 ORTHO05D006242 4.5e-126 456.1 528 49.2
Eucgr.B00088 Eucalyptus grandis HOM05D005415 ORTHO05D006242 2.3e-125 453.8 532 49.8
TAR629G2415 Trochodendron aralioides HOM05D005415 ORTHO05D006242 5.0e-125 452.6 544 49.6
Ciclev10031056m.g Citrus clementina HOM05D005415 ORTHO05D006242 4.2e-124 449.5 543 48.3
CiPaw.13G052100 Carya illinoinensis HOM05D005415 ORTHO05D006242 5.6e-124 449.1 531 47.6
Phvul.002G284900 Phaseolus vulgaris HOM05D005415 ORTHO05D006242 4.0e-122 443.0 553 48.1
Ca_17566_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 3.4e-121 439.9 545 47.5
Ca_29727_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 3.4e-121 439.9 545 47.5
GSVIVG01008582001 Vitis vinifera HOM05D005415 ORTHO05D006242 4.4e-121 439.5 546 47.8
QL10p002178 Quercus lobata HOM05D005415 ORTHO05D006242 9.8e-121 438.3 528 49.1
SGA_v2.0_scaffold414G51200 Striga asiatica HOM05D005415 ORTHO05D006242 2.9e-120 436.8 568 46.0
Migut.I00557 Erythranthe guttata HOM05D005415 ORTHO05D006242 3.7e-120 436.4 576 47.0
MSTRG.22895 Avicennia marina HOM05D005415 ORTHO05D006242 4.9e-120 436.0 557 45.6
Cfa018765 Carpinus fangiana HOM05D005415 ORTHO05D006242 4.1e-119 433.0 522 47.9
CsaV3_1G000400 Cucumis sativus L. HOM05D005415 ORTHO05D006242 4.1e-119 433.0 565 47.4
PGR083G0902 Punica granatum HOM05D005415 ORTHO05D006242 1.2e-118 431.4 542 47.6
Lj9C481T20 Lonicera japonica HOM05D005415 ORTHO05D006242 1.6e-118 431.0 524 49.6
VMungo0251G3541 Vigna mungo HOM05D005415 ORTHO05D006242 1.6e-118 431.0 605 45.1
SalBow5G0795 Salvia bowleyana HOM05D005415 ORTHO05D006242 1.3e-117 427.9 568 45.2
Sed0003726 Sechium edule HOM05D005415 ORTHO05D006242 2.9e-117 426.8 523 47.0
Sc10g0010570 Simmondsia chinensis HOM05D005415 ORTHO05D006242 2.9e-117 426.8 551 47.2
Nitab4.5_0001213g0090 Nicotiana tabacum HOM05D005415 ORTHO05D006242 5.0e-117 426.0 562 46.1
PGSC0003DMG400013896 Solanum tuberosum HOM05D005415 ORTHO05D006242 2.5e-116 423.7 551 47.0
Sopen12g001850 Solanum pennellii HOM05D005415 ORTHO05D006242 3.3e-116 423.3 549 47.0
Actinidia18334 Actinidia chinensis HOM05D005415 ORTHO05D006242 7.3e-116 422.2 538 46.7
arahy.Tifrunner.gnm1.ann1.NCF6IW Arachis hypogaea HOM05D005415 ORTHO05D006242 9.5e-116 421.8 576 43.4
Sabra15G0120800 Salix brachista HOM05D005415 ORTHO05D006242 9.5e-116 421.8 543 47.0
MELO3C026191.2 Cucumis melo HOM05D005415 ORTHO05D006242 1.2e-115 421.4 541 47.5
Potri.015G100200 Populus trichocarpa HOM05D005415 ORTHO05D006242 4.7e-115 419.5 526 47.1
HanXRQChr09g0273461 Helianthus annuus HOM05D005415 ORTHO05D006242 6.2e-115 419.1 588 45.1
Lj4g0026231 Lotus japonicus HOM05D005415 ORTHO05D006242 4.4e-113 412.9 644 42.2
Solyc12g005900.3 Solanum lycopersicum HOM05D005415 ORTHO05D006242 7.5e-113 412.1 553 45.9
FAN26G2295 Fragaria x ananassa HOM05D005415 ORTHO05D006242 9.8e-113 411.8 658 41.8
Glyma.08G010700 Glycine max HOM05D005415 ORTHO05D006242 2.2e-112 410.6 598 42.3
Nitab4.5_0003683g0010 Nicotiana tabacum HOM05D005415 ORTHO05D006242 2.2e-112 410.6 565 45.3
EL10Ac5g11383 Beta vulgaris HOM05D005415 ORTHO05D006242 2.4e-111 407.1 570 44.7
FAN19G3201 Fragaria x ananassa HOM05D005415 ORTHO05D006242 7.0e-111 405.6 659 41.1
FvH4_1g26610 Fragaria vesca HOM05D005415 ORTHO05D006242 9.2e-111 405.2 663 40.9
Prupe.5G147700 Prunus persica HOM05D005415 ORTHO05D006242 1.6e-110 404.4 563 45.3
CANSAT25G2590 Cannabis sativa HOM05D005415 ORTHO05D006242 1.0e-109 401.7 587 45.1
Cc10_g14800 Coffea canephora HOM05D005415 ORTHO05D006242 1.3e-109 401.4 584 43.3
Lsat_1_v5_gn_4_82521 Lactuca sativa HOM05D005415 ORTHO05D006242 3.9e-109 399.8 544 44.1
Psat7g037120 Pisum sativum HOM05D005415 ORTHO05D006242 5.0e-109 399.4 690 40.6
RcHm_v2.0_Chr7g0189541 Rosa chinensis HOM05D005415 ORTHO05D006242 5.0e-109 399.4 558 45.5
Peaxi162Scf00047g00185 Petunia axillaris HOM05D005415 ORTHO05D006242 1.9e-108 397.5 711 38.0
Cpa.g.sc4.162 Carica papaya HOM05D005415 ORTHO05D006242 2.5e-108 397.1 630 41.3
MD14G1152700 Malus domestica HOM05D005415 ORTHO05D006242 2.1e-107 394.0 579 43.9
Hund02456 Selenicereus undatus HOM05D005415 ORTHO05D006242 6.2e-107 392.5 548 44.0
Haze_07175 Corylus avellana HOM05D005415 ORTHO05D006242 8.1e-107 392.1 517 44.5
vmacro19135 Vaccinium macrocarpon HOM05D005415 ORTHO05D006242 8.1e-107 392.1 620 41.1
arahy.Tifrunner.gnm1.ann1.MQVT4E Arachis hypogaea HOM05D005415 ORTHO05D006242 6.8e-106 389.0 604 40.4
AUR62043951 Chenopodium quinoa HOM05D005415 ORTHO05D006242 1.2e-105 388.3 549 43.5
AUR62038846 Chenopodium quinoa HOM05D005415 ORTHO05D006242 1.5e-105 387.9 554 43.0
Lalb_Chr13g0297171 Lupinus albus HOM05D005415 ORTHO05D006242 7.5e-105 385.6 647 40.2
AUR62029576 Chenopodium quinoa HOM05D005415 ORTHO05D006242 1.7e-104 384.4 559 42.2
FAN28G1156 Fragaria x ananassa HOM05D005415 ORTHO05D006242 6.4e-104 382.5 549 44.4
Medtr8g096570 Medicago truncatula HOM05D005415 ORTHO05D006242 1.9e-103 380.9 689 39.2
unitig_8.g4692 Utricularia gibba HOM05D005415 ORTHO05D006242 3.2e-103 380.2 545 43.3
ClCG06G018070 Citrullus lanatus HOM05D005415 ORTHO05D006242 5.4e-103 379.4 583 42.2
Aqoxy3G01618 Aquilegia oxysepala HOM05D005415 ORTHO05D006242 7.1e-103 379.0 712 38.2
FAN23G0140 Fragaria x ananassa HOM05D005415 ORTHO05D006242 1.3e-101 374.8 537 44.9
HPP92_021709 Vanilla planifolia HOM05D005415 ORTHO05D006242 5.1e-101 372.9 526 40.7
Rhsim08G0192500 Rhododendron simsii HOM05D005415 ORTHO05D006242 8.6e-101 372.1 589 41.4
Zm00001eb085270 Zea mays HOM05D005415 ORTHO05D006242 2.6e-97 360.5 537 41.9
ECA232G0893 Erigeron canadensis HOM05D005415 ORTHO05D006242 3.4e-97 360.1 683 35.3
HPP92_021694 Vanilla planifolia HOM05D005415 ORTHO05D006242 5.8e-97 359.4 526 39.9
DCAR_021639 Daucus carota HOM05D005415 ORTHO05D006242 3.7e-96 356.7 611 39.9
MBI07_g01996_MAGBIO Magnolia biondii HOM05D005415 ORTHO05D006242 3.7e-96 356.7 665 37.3
Sopen05g009520 Solanum pennellii HOM05D005415 ORTHO05D006242 9.2e-95 352.1 556 42.8
Oeu030666.2 Olea europaea HOM05D005415 ORTHO05D006242 5.1e-93 346.3 856 32.4
PSO017G0412 Papaver somniferum HOM05D005415 ORTHO05D006242 6.6e-93 345.9 616 37.8
Manes.06G122000 Manihot esculenta HOM05D005415 ORTHO05D006242 1.2e-91 341.7 448 48.4
Nn4g22247 Nelumbo nucifera HOM05D005415 ORTHO05D006242 2.1e-91 340.9 443 47.4
PSO478G2612 Papaver somniferum HOM05D005415 ORTHO05D006242 1.1e-90 338.6 620 37.3
CDE05G0217 Ceratophyllum demersum HOM05D005415 ORTHO05D006242 5.4e-87 326.2 615 36.9
Actinidia25556 Actinidia chinensis HOM05D005415 ORTHO05D006242 1.3e-80 305.1 208 70.2
ATR0582G259 Amborella trichopoda HOM05D005415 ORTHO05D006242 8.4e-80 302.4 735 33.1
Gohir.A07G049320 Gossypium hirsutum HOM05D005415 ORTHO05D006242 4.3e-76 290.0 188 73.9
Solyc05g014400.4 Solanum lycopersicum HOM05D005415 ORTHO05D006242 1.6e-75 288.1 437 44.4
CAN.G2034.2 Capsicum annuum HOM05D005415 ORTHO05D006242 2.8e-75 287.3 445 42.7
Ah.11g045540 Amaranthus hybridus HOM05D005415 ORTHO05D006242 4.8e-75 286.6 494 37.9
CSS0000208 Camellia sinensis var. sinensis HOM05D005415 ORTHO05D006242 5.8e-73 279.6 189 69.8
TPR.G12905 Trifolium pratense HOM05D005415 ORTHO05D006242 2.1e-70 271.2 238 61.3
Pp3c4_19920 Physcomitrium patens HOM05D005415 ORTHO05D006242 1.5e-68 265.0 579 34.2
AagrBONN_evm.TU.Sc2ySwM_117.2504 Anthoceros agrestis HOM05D005415 ORTHO05D006242 2.5e-68 264.2 549 35.9
SMO146G0239 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 3.4e-65 253.8 528 35.0
SMO173G0006 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 1.4e-63 248.4 528 34.7
Os04g0391000 Oryza sativa ssp. japonica HOM05D005415 ORTHO05D006242 2.5e-63 247.7 209 60.3
Mapoly0147s0014 Marchantia polymorpha HOM05D005415 ORTHO05D006242 3.0e-61 240.7 689 28.9
SMO146G0204 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 3.7e-59 233.8 530 33.4
SHI31561 Sapria himalayana HOM05D005415 ORTHO05D006242 4.5e-57 226.9 199 60.8
Gohir.A07G049360 Gossypium hirsutum HOM05D005415 ORTHO05D006242 1.4e-47 195.3 194 54.6
SMO173G0041 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 7.2e-47 193.0 198 54.5
TPR.G12965 Trifolium pratense HOM05D005415 ORTHO05D006242 2.8e-43 181.0 199 50.8
SHI10695 Sapria himalayana HOM05D005415 ORTHO05D006242 2.2e-40 171.4 133 64.7
CBR_g45436 Chara braunii HOM05D005415 ORTHO05D006242 8.5e-40 169.5 232 42.7
TAR629G1046 Trochodendron aralioides HOM05D005415 ORTHO05D006242 1.1e-31 142.5 140 55.7
SHI10702 Sapria himalayana HOM05D005415 ORTHO05D006242 1.4e-29 135.6 283 38.5
MCO10G310 Micromonas commoda HOM05D005415 ORTHO05D006242 1.2e-25 122.5 229 35.8
PSO302G0032 Papaver somniferum HOM05D005415 ORTHO05D006242 6.5e-24 116.7 160 45.6
Cre17.g712450 Chlamydomonas reinhardtii HOM05D005415 ORTHO05D006242 1.5e-23 115.5 195 37.4
Medtr1g057810 Medicago truncatula HOM05D000559 ORTHO05D000596 1.5e-23 115.5 195 41.0
Medtr1g105150 Medicago truncatula HOM05D000559 ORTHO05D000596 1.5e-23 115.5 195 41.0
SHI31560 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-20 105.1 133 50.4
PRCOL_00000625 Prasinoderma coloniale HOM05D005415 ORTHO05D006242 4.1e-18 97.4 141 39.0
PSO063G6924 Papaver somniferum HOM05D005415 ORTHO05D006242 7.0e-18 96.7 127 41.7
PSO478G1426 Papaver somniferum HOM05D005415 ORTHO05D006242 2.0e-17 95.1 345 29.6
TAR381G1645 Trochodendron aralioides HOM05D005415 ORTHO05D006242 7.7e-17 93.2 59 71.2
CSS0026788 Camellia sinensis var. sinensis HOM05D005415 ORTHO05D006242 3.2e-15 87.8 91 53.8
SEGI_11582 Sequoiadendron giganteum HOM05D005415 ORTHO05D006242 1.8e-13 82.0 81 54.3
Lsat_1_v5_gn_8_99581 Lactuca sativa HOM05D005415 ORTHO05D006242 3.0e-13 81.3 152 36.8
Medtr1g069480 Medicago truncatula HOM05D005415 ORTHO05D006242 2.0e-12 78.6 108 44.4
Medtr1g071270 Medicago truncatula HOM05D005415 ORTHO05D006242 5.9e-09 67.0 105 41.0
Lsat_1_v5_gn_4_20540 Lactuca sativa HOM05D005415 ORTHO05D006242 7.7e-09 66.6 83 49.4
PSO017G3192 Papaver somniferum HOM05D005415 ORTHO05D006242 1.0e-08 66.2 76 48.7
PSO063G6394 Papaver somniferum HOM05D005415 ORTHO05D006242 3.8e-08 64.3 56 58.9
SMO146G0197 Selaginella moellendorffii HOM05D025663 ORTHO05D006242 6.6e-08 63.5 102 40.2
SMO146G0246 Selaginella moellendorffii HOM05D025663 ORTHO05D006242 6.6e-08 63.5 102 40.2
SHI10696 Sapria himalayana HOM05D005415 ORTHO05D006242 1.9e-07 62.0 49 61.2
HPP92_021692 Vanilla planifolia HOM05D005415 ORTHO05D006242 7.3e-07 60.1 80 42.5
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 4.7e-06 57.4 127 29.9
SEGI_12458 Sequoiadendron giganteum HOM05D005415 ORTHO05D006242 6.1e-06 57.0 82 30.5
Cre16.g653000 Chlamydomonas reinhardtii HOM05D006752 ORTHO05D008597 8.0e-06 56.6 137 30.7


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